RNA–Protein interactions for RNA: ENST00000464670.1

LSP1-213, Transcript of lymphocyte specific protein 1, humanhuman

TSL 5

Gene LSP1, Length 244 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-213ENST00000464670 NISCHQ9Y2I1 1504 aa34.07■■■■□ 3.04
LSP1-213ENST00000464670 ABCC9O60706 1549 aa31.03■■■□□ 2.56
LSP1-213ENST00000464670 CCDC180Q9P1Z9 1646 aa30.84■■■□□ 2.53
LSP1-213ENST00000464670 RB1CC1Q8TDY2 1594 aa29.49■■■□□ 2.31
LSP1-213ENST00000464670 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
LSP1-213ENST00000464670 NACADO15069 1562 aa29.21■■■□□ 2.27
LSP1-213ENST00000464670 UNC13AQ9UPW8 1703 aa28.84■■■□□ 2.21
LSP1-213ENST00000464670 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
LSP1-213ENST00000464670 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
LSP1-213ENST00000464670 MYO15BQ96JP2 1530 aa28.74■■■□□ 2.19
LSP1-213ENST00000464670 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
LSP1-213ENST00000464670 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
LSP1-213ENST00000464670 DCAF1Q9Y4B6 1507 aa28.2■■■□□ 2.1
LSP1-213ENST00000464670 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
LSP1-213ENST00000464670 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
LSP1-213ENST00000464670 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
LSP1-213ENST00000464670 EIF4G1Q04637 1599 aaKnown RBP27.95■■■□□ 2.07
LSP1-213ENST00000464670 SCRIBQ14160 1630 aa27.94■■■□□ 2.06
LSP1-213ENST00000464670 DNAJC5Q9H3Z4 198 aa27.38■■□□□ 1.97
LSP1-213ENST00000464670 CUX2O14529 1486 aa27.03■■□□□ 1.92
LSP1-213ENST00000464670 NCAPD3P42695 1498 aa26.94■■□□□ 1.9
LSP1-213ENST00000464670 ERCC6Q03468 1493 aa26.87■■□□□ 1.89
LSP1-213ENST00000464670 ATAD2BQ9ULI0 1458 aa26.77■■□□□ 1.88
LSP1-213ENST00000464670 HMGXB3Q12766 1538 aa26.75■■□□□ 1.87
LSP1-213ENST00000464670 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
LSP1-213ENST00000464670 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
LSP1-213ENST00000464670 NESP48681 1621 aa26.56■■□□□ 1.84
LSP1-213ENST00000464670 BAZ1AQ9NRL2 1556 aaPredicted RBP26.5■■□□□ 1.83
LSP1-213ENST00000464670 BAZ1BQ9UIG0 1483 aaKnown RBP26.49■■□□□ 1.83
LSP1-213ENST00000464670 PEG3Q9GZU2 1588 aa26.48■■□□□ 1.83
LSP1-213ENST00000464670 THOC2Q8NI27 1593 aaKnown RBP26.46■■□□□ 1.83
LSP1-213ENST00000464670 LAMC3Q9Y6N6 1575 aa26.43■■□□□ 1.82
LSP1-213ENST00000464670 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
LSP1-213ENST00000464670 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
LSP1-213ENST00000464670 MROH2BQ7Z745 1585 aa26.2■■□□□ 1.79
LSP1-213ENST00000464670 CADPSQ9ULU8 1353 aa26.07■■□□□ 1.76
LSP1-213ENST00000464670 MRC2Q9UBG0 1479 aa26.03■■□□□ 1.76
LSP1-213ENST00000464670 WDR62O43379 1518 aa26.02■■□□□ 1.76
LSP1-213ENST00000464670 TRIM41Q8WV44 630 aa25.91■■□□□ 1.74
LSP1-213ENST00000464670 WIZO95785 1651 aa25.89■■□□□ 1.73
LSP1-213ENST00000464670 CEP164Q9UPV0 1460 aa25.85■■□□□ 1.73
LSP1-213ENST00000464670 FANCD2Q9BXW9 1451 aa25.77■■□□□ 1.72
LSP1-213ENST00000464670 CFTRP13569 1480 aa25.72■■□□□ 1.71
LSP1-213ENST00000464670 OSCARQ8IYS5 282 aa25.64■■□□□ 1.7
LSP1-213ENST00000464670 URB2Q14146 1524 aaKnown RBP25.58■■□□□ 1.68
LSP1-213ENST00000464670 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
LSP1-213ENST00000464670 PRDM2Q13029 1718 aa25.52■■□□□ 1.68
LSP1-213ENST00000464670 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
LSP1-213ENST00000464670 RIMBP3CA6NJZ7 1639 aa25.4■■□□□ 1.66
LSP1-213ENST00000464670 RIMBP3BA6NNM3 1639 aa25.4■■□□□ 1.66
LSP1-213ENST00000464670 RIMBP3Q9UFD9 1639 aa25.4■■□□□ 1.66
LSP1-213ENST00000464670 IFT140Q96RY7 1462 aa25.36■■□□□ 1.65
LSP1-213ENST00000464670 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
LSP1-213ENST00000464670 ARHGEF11O15085 1522 aa25.27■■□□□ 1.64
LSP1-213ENST00000464670 TOPBP1Q92547 1522 aa25.24■■□□□ 1.63
LSP1-213ENST00000464670 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
LSP1-213ENST00000464670 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
LSP1-213ENST00000464670 EIF4G3O43432 1585 aaKnown RBP25.2■■□□□ 1.62
LSP1-213ENST00000464670 DNMBPQ6XZF7 1577 aa25.15■■□□□ 1.62
LSP1-213ENST00000464670 CHD1O14646 1710 aa25.09■■□□□ 1.61
LSP1-213ENST00000464670 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
LSP1-213ENST00000464670 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
LSP1-213ENST00000464670 AQRO60306 1485 aaKnown RBP eCLIP25.01■■□□□ 1.59
LSP1-213ENST00000464670 ARAP1Q96P48 1450 aa24.98■■□□□ 1.59
LSP1-213ENST00000464670 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
LSP1-213ENST00000464670 WDR97A6NE52 1622 aa24.9■■□□□ 1.58
LSP1-213ENST00000464670 FBLN2P98095 1184 aa24.86■■□□□ 1.57
LSP1-213ENST00000464670 TRHP20396 242 aaPredicted RBP24.85■■□□□ 1.57
LSP1-213ENST00000464670 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
LSP1-213ENST00000464670 SOGA1O94964 1423 aa24.81■■□□□ 1.56
LSP1-213ENST00000464670 CLASP1Q7Z460 1538 aa24.81■■□□□ 1.56
LSP1-213ENST00000464670 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
LSP1-213ENST00000464670 SNAPC4Q5SXM2 1469 aa24.77■■□□□ 1.56
LSP1-213ENST00000464670 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
LSP1-213ENST00000464670 MAGI1Q96QZ7 1491 aaPredicted RBP24.75■■□□□ 1.55
LSP1-213ENST00000464670 FGD5Q6ZNL6 1462 aa24.73■■□□□ 1.55
LSP1-213ENST00000464670 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
LSP1-213ENST00000464670 CHMP7Q8WUX9 453 aaPredicted RBP24.67■■□□□ 1.54
LSP1-213ENST00000464670 CUX1P39880 1505 aa24.66■■□□□ 1.54
LSP1-213ENST00000464670 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
LSP1-213ENST00000464670 PBRM1Q86U86 1689 aa24.59■■□□□ 1.53
LSP1-213ENST00000464670 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
LSP1-213ENST00000464670 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
LSP1-213ENST00000464670 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
LSP1-213ENST00000464670 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
LSP1-213ENST00000464670 GRIN2AQ12879 1464 aa24.36■■□□□ 1.49
LSP1-213ENST00000464670 ADAMTS12P58397 1594 aa24.32■■□□□ 1.48
LSP1-213ENST00000464670 NUP160Q12769 1436 aa24.31■■□□□ 1.48
LSP1-213ENST00000464670 ERCC6L2Q5T890 1561 aa24.31■■□□□ 1.48
LSP1-213ENST00000464670 CEP170Q5SW79 1584 aa24.29■■□□□ 1.48
LSP1-213ENST00000464670 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
LSP1-213ENST00000464670 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
LSP1-213ENST00000464670 BIVM-ERCC5R4GMW8 1640 aa24.23■■□□□ 1.47
LSP1-213ENST00000464670 FHAD1B1AJZ9 1412 aa24.21■■□□□ 1.47
LSP1-213ENST00000464670 TOP2BQ02880 1626 aa24.21■■□□□ 1.47
LSP1-213ENST00000464670 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
LSP1-213ENST00000464670 KIF13AQ9H1H9 1805 aa24.17■■□□□ 1.46
LSP1-213ENST00000464670 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
LSP1-213ENST00000464670 JPH4Q96JJ6 628 aa24■■□□□ 1.43
LSP1-213ENST00000464670 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms