RNA–Protein interactions for RNA: ENST00000464590.1

PGAP2-211, Transcript of post-GPI attachment to proteins 2, humanhuman

TSL 3

Gene PGAP2, Length 846 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP2-211ENST00000464590 NISCHQ9Y2I1 1504 aa37.07■■■■□ 3.53
PGAP2-211ENST00000464590 ABCC9O60706 1549 aa33.3■■■□□ 2.92
PGAP2-211ENST00000464590 CCDC180Q9P1Z9 1646 aa33.19■■■□□ 2.9
PGAP2-211ENST00000464590 RB1CC1Q8TDY2 1594 aa31.65■■■□□ 2.66
PGAP2-211ENST00000464590 NACADO15069 1562 aa31.45■■■□□ 2.63
PGAP2-211ENST00000464590 DCAF8L2P0C7V8 631 aa31.37■■■□□ 2.61
PGAP2-211ENST00000464590 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
PGAP2-211ENST00000464590 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
PGAP2-211ENST00000464590 MYO15BQ96JP2 1530 aa31.03■■■□□ 2.56
PGAP2-211ENST00000464590 UNC13AQ9UPW8 1703 aa30.84■■■□□ 2.53
PGAP2-211ENST00000464590 BICRAQ9NZM4 1560 aa30.75■■■□□ 2.51
PGAP2-211ENST00000464590 ZCCHC6Q5VYS8 1495 aaKnown RBP30.69■■■□□ 2.5
PGAP2-211ENST00000464590 DCAF1Q9Y4B6 1507 aa30.62■■■□□ 2.49
PGAP2-211ENST00000464590 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
PGAP2-211ENST00000464590 SCRIBQ14160 1630 aa30.25■■■□□ 2.43
PGAP2-211ENST00000464590 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
PGAP2-211ENST00000464590 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
PGAP2-211ENST00000464590 EIF4G1Q04637 1599 aaKnown RBP29.98■■■□□ 2.39
PGAP2-211ENST00000464590 NCAPD3P42695 1498 aa29.09■■■□□ 2.25
PGAP2-211ENST00000464590 ATAD2BQ9ULI0 1458 aa28.97■■■□□ 2.23
PGAP2-211ENST00000464590 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
PGAP2-211ENST00000464590 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
PGAP2-211ENST00000464590 SMARCA2P51531 1590 aa28.85■■■□□ 2.21
PGAP2-211ENST00000464590 HMGXB3Q12766 1538 aa28.8■■■□□ 2.2
PGAP2-211ENST00000464590 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
PGAP2-211ENST00000464590 ERCC6Q03468 1493 aa28.74■■■□□ 2.19
PGAP2-211ENST00000464590 CUX2O14529 1486 aa28.71■■■□□ 2.19
PGAP2-211ENST00000464590 BAZ1BQ9UIG0 1483 aaKnown RBP28.66■■■□□ 2.18
PGAP2-211ENST00000464590 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
PGAP2-211ENST00000464590 NESP48681 1621 aa28.59■■■□□ 2.17
PGAP2-211ENST00000464590 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
PGAP2-211ENST00000464590 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
PGAP2-211ENST00000464590 PDS5BQ9NTI5 1447 aa28.26■■■□□ 2.11
PGAP2-211ENST00000464590 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
PGAP2-211ENST00000464590 CADPSQ9ULU8 1353 aa28.21■■■□□ 2.11
PGAP2-211ENST00000464590 WIZO95785 1651 aa28.17■■■□□ 2.1
PGAP2-211ENST00000464590 KIF21AQ7Z4S6 1674 aa28.14■■■□□ 2.1
PGAP2-211ENST00000464590 RSF1Q96T23 1441 aaPredicted RBP27.99■■■□□ 2.07
PGAP2-211ENST00000464590 MRC2Q9UBG0 1479 aa27.98■■■□□ 2.07
PGAP2-211ENST00000464590 WDR62O43379 1518 aa27.89■■■□□ 2.06
PGAP2-211ENST00000464590 CFTRP13569 1480 aa27.85■■■□□ 2.05
PGAP2-211ENST00000464590 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
PGAP2-211ENST00000464590 FANCD2Q9BXW9 1451 aa27.84■■■□□ 2.05
PGAP2-211ENST00000464590 TOP2AP11388 1531 aaKnown RBP27.82■■■□□ 2.04
PGAP2-211ENST00000464590 URB2Q14146 1524 aaKnown RBP27.62■■■□□ 2.01
PGAP2-211ENST00000464590 CCDC88BA6NC98 1476 aa27.57■■■□□ 2
PGAP2-211ENST00000464590 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
PGAP2-211ENST00000464590 OSCARQ8IYS5 282 aa27.47■■□□□ 1.99
PGAP2-211ENST00000464590 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
PGAP2-211ENST00000464590 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
PGAP2-211ENST00000464590 TOPBP1Q92547 1522 aa27.31■■□□□ 1.96
PGAP2-211ENST00000464590 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
PGAP2-211ENST00000464590 ABCC8Q09428 1581 aa27.26■■□□□ 1.96
PGAP2-211ENST00000464590 DNMBPQ6XZF7 1577 aa27.18■■□□□ 1.94
PGAP2-211ENST00000464590 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
PGAP2-211ENST00000464590 AQRO60306 1485 aaKnown RBP eCLIP27.06■■□□□ 1.92
PGAP2-211ENST00000464590 TARBP1Q13395 1621 aaKnown RBP27.04■■□□□ 1.92
PGAP2-211ENST00000464590 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
PGAP2-211ENST00000464590 RIMBP3CA6NJZ7 1639 aa27■■□□□ 1.91
PGAP2-211ENST00000464590 RIMBP3BA6NNM3 1639 aa27■■□□□ 1.91
PGAP2-211ENST00000464590 RIMBP3Q9UFD9 1639 aa27■■□□□ 1.91
PGAP2-211ENST00000464590 RAD54L2Q9Y4B4 1467 aa26.95■■□□□ 1.91
PGAP2-211ENST00000464590 SOGA1O94964 1423 aa26.95■■□□□ 1.9
PGAP2-211ENST00000464590 ARHGEF11O15085 1522 aa26.94■■□□□ 1.9
PGAP2-211ENST00000464590 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
PGAP2-211ENST00000464590 FBLN2P98095 1184 aa26.9■■□□□ 1.9
PGAP2-211ENST00000464590 FGD5Q6ZNL6 1462 aa26.85■■□□□ 1.89
PGAP2-211ENST00000464590 CHD1O14646 1710 aa26.84■■□□□ 1.89
PGAP2-211ENST00000464590 CUX1P39880 1505 aa26.82■■□□□ 1.88
PGAP2-211ENST00000464590 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
PGAP2-211ENST00000464590 SUPT5HO00267 1087 aaKnown RBP26.76■■□□□ 1.87
PGAP2-211ENST00000464590 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
PGAP2-211ENST00000464590 SNAPC4Q5SXM2 1469 aa26.74■■□□□ 1.87
PGAP2-211ENST00000464590 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
PGAP2-211ENST00000464590 GRIN2BQ13224 1484 aa26.68■■□□□ 1.86
PGAP2-211ENST00000464590 ARAP1Q96P48 1450 aa26.68■■□□□ 1.86
PGAP2-211ENST00000464590 MAGI1Q96QZ7 1491 aaPredicted RBP26.68■■□□□ 1.86
PGAP2-211ENST00000464590 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
PGAP2-211ENST00000464590 CLASP1Q7Z460 1538 aa26.6■■□□□ 1.85
PGAP2-211ENST00000464590 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
PGAP2-211ENST00000464590 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
PGAP2-211ENST00000464590 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
PGAP2-211ENST00000464590 TRHP20396 242 aaPredicted RBP26.52■■□□□ 1.84
PGAP2-211ENST00000464590 PBRM1Q86U86 1689 aa26.47■■□□□ 1.83
PGAP2-211ENST00000464590 WRNQ14191 1432 aaPredicted RBP eCLIP26.47■■□□□ 1.839e-6■■■■■ 50.1
PGAP2-211ENST00000464590 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
PGAP2-211ENST00000464590 TOP2BQ02880 1626 aa26.36■■□□□ 1.81
PGAP2-211ENST00000464590 BIVM-ERCC5R4GMW8 1640 aa26.34■■□□□ 1.81
PGAP2-211ENST00000464590 GRIN2AQ12879 1464 aa26.32■■□□□ 1.8
PGAP2-211ENST00000464590 FHAD1B1AJZ9 1412 aa26.27■■□□□ 1.8
PGAP2-211ENST00000464590 ADAMTS12P58397 1594 aa26.26■■□□□ 1.79
PGAP2-211ENST00000464590 NUP160Q12769 1436 aa26.26■■□□□ 1.79
PGAP2-211ENST00000464590 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
PGAP2-211ENST00000464590 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
PGAP2-211ENST00000464590 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
PGAP2-211ENST00000464590 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
PGAP2-211ENST00000464590 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
PGAP2-211ENST00000464590 PRG4Q92954 1404 aaPredicted RBP26.03■■□□□ 1.76
PGAP2-211ENST00000464590 IGF1RP08069 1367 aa25.95■■□□□ 1.74
PGAP2-211ENST00000464590 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms