RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 NISCHQ9Y2I1 1504 aa29.87■■■□□ 2.37
SUPT20H-204ENST00000464572 CCDC180Q9P1Z9 1646 aa26.24■■□□□ 1.79
SUPT20H-204ENST00000464572 ABCC9O60706 1549 aa25.26■■□□□ 1.63
SUPT20H-204ENST00000464572 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
SUPT20H-204ENST00000464572 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
SUPT20H-204ENST00000464572 DCAF1Q9Y4B6 1507 aa24.68■■□□□ 1.54
SUPT20H-204ENST00000464572 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
SUPT20H-204ENST00000464572 NACADO15069 1562 aa24.57■■□□□ 1.52
SUPT20H-204ENST00000464572 RB1CC1Q8TDY2 1594 aa24.47■■□□□ 1.51
SUPT20H-204ENST00000464572 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
SUPT20H-204ENST00000464572 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
SUPT20H-204ENST00000464572 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
SUPT20H-204ENST00000464572 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
SUPT20H-204ENST00000464572 BICRAQ9NZM4 1560 aa23.73■■□□□ 1.39
SUPT20H-204ENST00000464572 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
SUPT20H-204ENST00000464572 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
SUPT20H-204ENST00000464572 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
SUPT20H-204ENST00000464572 MROH2BQ7Z745 1585 aa23.06■■□□□ 1.28
SUPT20H-204ENST00000464572 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
SUPT20H-204ENST00000464572 RSF1Q96T23 1441 aaPredicted RBP23■■□□□ 1.27
SUPT20H-204ENST00000464572 SUPT5HO00267 1087 aaKnown RBP22.94■■□□□ 1.26
SUPT20H-204ENST00000464572 WIZO95785 1651 aa22.84■■□□□ 1.25
SUPT20H-204ENST00000464572 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
SUPT20H-204ENST00000464572 ATAD2BQ9ULI0 1458 aa22.8■■□□□ 1.24
SUPT20H-204ENST00000464572 PEG3Q9GZU2 1588 aa22.78■■□□□ 1.24
SUPT20H-204ENST00000464572 SMARCA2P51531 1590 aa22.77■■□□□ 1.24
SUPT20H-204ENST00000464572 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
SUPT20H-204ENST00000464572 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
SUPT20H-204ENST00000464572 BAZ1BQ9UIG0 1483 aaKnown RBP22.65■■□□□ 1.22
SUPT20H-204ENST00000464572 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
SUPT20H-204ENST00000464572 TOP2AP11388 1531 aaKnown RBP22.59■■□□□ 1.21
SUPT20H-204ENST00000464572 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
SUPT20H-204ENST00000464572 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.13
SUPT20H-204ENST00000464572 CFTRP13569 1480 aa22.05■■□□□ 1.12
SUPT20H-204ENST00000464572 NESP48681 1621 aa22.03■■□□□ 1.12
SUPT20H-204ENST00000464572 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
SUPT20H-204ENST00000464572 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
SUPT20H-204ENST00000464572 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
SUPT20H-204ENST00000464572 FANCD2Q9BXW9 1451 aa21.83■■□□□ 1.09
SUPT20H-204ENST00000464572 ABCC8Q09428 1581 aa21.74■■□□□ 1.07
SUPT20H-204ENST00000464572 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
SUPT20H-204ENST00000464572 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
SUPT20H-204ENST00000464572 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
SUPT20H-204ENST00000464572 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
SUPT20H-204ENST00000464572 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
SUPT20H-204ENST00000464572 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
SUPT20H-204ENST00000464572 CUX1P39880 1505 aa21.59■■□□□ 1.05
SUPT20H-204ENST00000464572 SYNJ1O43426 1573 aa21.58■■□□□ 1.05
SUPT20H-204ENST00000464572 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.04
SUPT20H-204ENST00000464572 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
SUPT20H-204ENST00000464572 DNMBPQ6XZF7 1577 aa21.54■■□□□ 1.04
SUPT20H-204ENST00000464572 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
SUPT20H-204ENST00000464572 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
SUPT20H-204ENST00000464572 THOC2Q8NI27 1593 aaKnown RBP21.5■■□□□ 1.03
SUPT20H-204ENST00000464572 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
SUPT20H-204ENST00000464572 WDR62O43379 1518 aa21.47■■□□□ 1.03
SUPT20H-204ENST00000464572 FGD5Q6ZNL6 1462 aa21.43■■□□□ 1.02
SUPT20H-204ENST00000464572 POLA1P09884 1462 aaPredicted RBP21.4■■□□□ 1.02
SUPT20H-204ENST00000464572 SOGA1O94964 1423 aa21.34■■□□□ 1.01
SUPT20H-204ENST00000464572 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
SUPT20H-204ENST00000464572 CUX2O14529 1486 aa21.32■■□□□ 1
SUPT20H-204ENST00000464572 IFT140Q96RY7 1462 aa21.24■□□□□ 0.99
SUPT20H-204ENST00000464572 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
SUPT20H-204ENST00000464572 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
SUPT20H-204ENST00000464572 FAM9AQ8IZU1 332 aaPredicted RBP21.2■□□□□ 0.98
SUPT20H-204ENST00000464572 RUSC2Q8N2Y8 1516 aa21.2■□□□□ 0.98
SUPT20H-204ENST00000464572 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
SUPT20H-204ENST00000464572 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
SUPT20H-204ENST00000464572 KIF27Q86VH2 1401 aa21.17■□□□□ 0.98
SUPT20H-204ENST00000464572 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
SUPT20H-204ENST00000464572 AQRO60306 1485 aaKnown RBP eCLIP21.12■□□□□ 0.978e-6■■■■□ 23.2
SUPT20H-204ENST00000464572 EEA1Q15075 1411 aa21.1■□□□□ 0.97
SUPT20H-204ENST00000464572 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
SUPT20H-204ENST00000464572 ABCA5Q8WWZ7 1642 aa21.08■□□□□ 0.96
SUPT20H-204ENST00000464572 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
SUPT20H-204ENST00000464572 EIF4G3O43432 1585 aaKnown RBP21.05■□□□□ 0.96
SUPT20H-204ENST00000464572 IGF1RP08069 1367 aa21.03■□□□□ 0.96
SUPT20H-204ENST00000464572 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
SUPT20H-204ENST00000464572 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
SUPT20H-204ENST00000464572 PBRM1Q86U86 1689 aa20.97■□□□□ 0.95
SUPT20H-204ENST00000464572 EHMT2Q96KQ7 1210 aa20.93■□□□□ 0.94
SUPT20H-204ENST00000464572 CARMIL1Q5VZK9 1371 aa20.92■□□□□ 0.94
SUPT20H-204ENST00000464572 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
SUPT20H-204ENST00000464572 PRXQ9BXM0 1461 aa20.89■□□□□ 0.94
SUPT20H-204ENST00000464572 CUL7Q14999 1698 aa20.88■□□□□ 0.93
SUPT20H-204ENST00000464572 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
SUPT20H-204ENST00000464572 MAGI1Q96QZ7 1491 aaPredicted RBP20.86■□□□□ 0.93
SUPT20H-204ENST00000464572 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
SUPT20H-204ENST00000464572 ADAMTS12P58397 1594 aa20.84■□□□□ 0.93
SUPT20H-204ENST00000464572 KIF21BO75037 1637 aa20.84■□□□□ 0.93
SUPT20H-204ENST00000464572 RAPGEF2Q9Y4G8 1499 aa20.84■□□□□ 0.93
SUPT20H-204ENST00000464572 FBLN2P98095 1184 aa20.8■□□□□ 0.92
SUPT20H-204ENST00000464572 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
SUPT20H-204ENST00000464572 GOLGA3Q08378 1498 aa20.79■□□□□ 0.92
SUPT20H-204ENST00000464572 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
SUPT20H-204ENST00000464572 UBTFP17480 764 aaKnown RBP20.77■□□□□ 0.91
SUPT20H-204ENST00000464572 GRIN2AQ12879 1464 aa20.73■□□□□ 0.91
SUPT20H-204ENST00000464572 CHD1O14646 1710 aa20.68■□□□□ 0.9
SUPT20H-204ENST00000464572 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.9
SUPT20H-204ENST00000464572 NUP160Q12769 1436 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms