RNA–Protein interactions for RNA: ENST00000464556.1

GSDMB-206, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 710 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-206ENST00000464556 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
GSDMB-206ENST00000464556 CCDC180Q9P1Z9 1646 aa34.28■■■■□ 3.08
GSDMB-206ENST00000464556 ABCC9O60706 1549 aa34.13■■■■□ 3.05
GSDMB-206ENST00000464556 RB1CC1Q8TDY2 1594 aa32.55■■■□□ 2.8
GSDMB-206ENST00000464556 NACADO15069 1562 aa32.36■■■□□ 2.77
GSDMB-206ENST00000464556 DCAF8L2P0C7V8 631 aa32.34■■■□□ 2.77
GSDMB-206ENST00000464556 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
GSDMB-206ENST00000464556 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
GSDMB-206ENST00000464556 DNAJC5BQ9UF47 199 aa31.81■■■□□ 2.68
GSDMB-206ENST00000464556 UNC13AQ9UPW8 1703 aa31.8■■■□□ 2.68
GSDMB-206ENST00000464556 PABPN1Q86U42 306 aaKnown RBP eCLIP31.76■■■□□ 2.673e-7■□□□□ 11.2
GSDMB-206ENST00000464556 DCAF1Q9Y4B6 1507 aa31.63■■■□□ 2.65
GSDMB-206ENST00000464556 BICRAQ9NZM4 1560 aa31.6■■■□□ 2.65
GSDMB-206ENST00000464556 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
GSDMB-206ENST00000464556 SHROOM4Q9ULL8 1493 aa31.23■■■□□ 2.59
GSDMB-206ENST00000464556 CC2D2AQ9P2K1 1620 aa30.84■■■□□ 2.53
GSDMB-206ENST00000464556 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
GSDMB-206ENST00000464556 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
GSDMB-206ENST00000464556 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
GSDMB-206ENST00000464556 SMARCA4P51532 1647 aa29.83■■■□□ 2.37
GSDMB-206ENST00000464556 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
GSDMB-206ENST00000464556 SMARCA2P51531 1590 aa29.74■■■□□ 2.35
GSDMB-206ENST00000464556 BAZ1AQ9NRL2 1556 aaPredicted RBP29.73■■■□□ 2.35
GSDMB-206ENST00000464556 HMGXB3Q12766 1538 aa29.71■■■□□ 2.35
GSDMB-206ENST00000464556 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
GSDMB-206ENST00000464556 PEG3Q9GZU2 1588 aa29.55■■■□□ 2.32
GSDMB-206ENST00000464556 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
GSDMB-206ENST00000464556 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
GSDMB-206ENST00000464556 CUX2O14529 1486 aa29.36■■■□□ 2.29
GSDMB-206ENST00000464556 NESP48681 1621 aa29.36■■■□□ 2.29
GSDMB-206ENST00000464556 WIZO95785 1651 aa29.23■■■□□ 2.27
GSDMB-206ENST00000464556 LAMC3Q9Y6N6 1575 aa29.19■■■□□ 2.26
GSDMB-206ENST00000464556 RSF1Q96T23 1441 aaPredicted RBP29.13■■■□□ 2.25
GSDMB-206ENST00000464556 DNAJC5Q9H3Z4 198 aa29.09■■■□□ 2.25
GSDMB-206ENST00000464556 THOC2Q8NI27 1593 aaKnown RBP29.07■■■□□ 2.24
GSDMB-206ENST00000464556 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
GSDMB-206ENST00000464556 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
GSDMB-206ENST00000464556 CADPSQ9ULU8 1353 aa28.97■■■□□ 2.23
GSDMB-206ENST00000464556 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
GSDMB-206ENST00000464556 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
GSDMB-206ENST00000464556 WDR62O43379 1518 aa28.7■■■□□ 2.19
GSDMB-206ENST00000464556 CEP164Q9UPV0 1460 aa28.69■■■□□ 2.18
GSDMB-206ENST00000464556 CFTRP13569 1480 aa28.68■■■□□ 2.18
GSDMB-206ENST00000464556 FANCD2Q9BXW9 1451 aa28.66■■■□□ 2.18
GSDMB-206ENST00000464556 CCDC88BA6NC98 1476 aa28.57■■■□□ 2.16
GSDMB-206ENST00000464556 SUPT5HO00267 1087 aaKnown RBP28.49■■■□□ 2.15
GSDMB-206ENST00000464556 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
GSDMB-206ENST00000464556 PRDM2Q13029 1718 aa28.41■■■□□ 2.14
GSDMB-206ENST00000464556 TOPBP1Q92547 1522 aa28.13■■■□□ 2.09
GSDMB-206ENST00000464556 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
GSDMB-206ENST00000464556 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
GSDMB-206ENST00000464556 DNMBPQ6XZF7 1577 aa28.06■■■□□ 2.08
GSDMB-206ENST00000464556 ZNF608Q9ULD9 1512 aaPredicted RBP28.04■■■□□ 2.08
GSDMB-206ENST00000464556 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
GSDMB-206ENST00000464556 EIF4G3O43432 1585 aaKnown RBP27.93■■■□□ 2.06
GSDMB-206ENST00000464556 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
GSDMB-206ENST00000464556 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
GSDMB-206ENST00000464556 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
GSDMB-206ENST00000464556 AQRO60306 1485 aaKnown RBP eCLIP27.78■■■□□ 2.04
GSDMB-206ENST00000464556 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
GSDMB-206ENST00000464556 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
GSDMB-206ENST00000464556 CUX1P39880 1505 aa27.71■■■□□ 2.03
GSDMB-206ENST00000464556 SOGA1O94964 1423 aa27.69■■■□□ 2.02
GSDMB-206ENST00000464556 RIMBP3CA6NJZ7 1639 aa27.67■■■□□ 2.02
GSDMB-206ENST00000464556 RIMBP3BA6NNM3 1639 aa27.67■■■□□ 2.02
GSDMB-206ENST00000464556 RIMBP3Q9UFD9 1639 aa27.67■■■□□ 2.02
GSDMB-206ENST00000464556 CHD1O14646 1710 aa27.64■■■□□ 2.02
GSDMB-206ENST00000464556 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
GSDMB-206ENST00000464556 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
GSDMB-206ENST00000464556 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
GSDMB-206ENST00000464556 SNAPC4Q5SXM2 1469 aa27.55■■■□□ 2
GSDMB-206ENST00000464556 FBLN2P98095 1184 aa27.54■■■□□ 2
GSDMB-206ENST00000464556 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
GSDMB-206ENST00000464556 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
GSDMB-206ENST00000464556 MAGI1Q96QZ7 1491 aaPredicted RBP27.47■■□□□ 1.99
GSDMB-206ENST00000464556 TOP2BQ02880 1626 aa27.43■■□□□ 1.98
GSDMB-206ENST00000464556 BIVM-ERCC5R4GMW8 1640 aa27.41■■□□□ 1.98
GSDMB-206ENST00000464556 SYNJ1O43426 1573 aa27.41■■□□□ 1.98
GSDMB-206ENST00000464556 ABCA10Q8WWZ4 1543 aa27.41■■□□□ 1.98
GSDMB-206ENST00000464556 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
GSDMB-206ENST00000464556 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
GSDMB-206ENST00000464556 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
GSDMB-206ENST00000464556 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
GSDMB-206ENST00000464556 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
GSDMB-206ENST00000464556 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
GSDMB-206ENST00000464556 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
GSDMB-206ENST00000464556 CYB5RLQ6IPT4 315 aa27.32■■□□□ 1.96
GSDMB-206ENST00000464556 ADAMTS12P58397 1594 aa27.17■■□□□ 1.94
GSDMB-206ENST00000464556 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
GSDMB-206ENST00000464556 ERICH3Q5RHP9 1530 aa27.06■■□□□ 1.92
GSDMB-206ENST00000464556 FHAD1B1AJZ9 1412 aa27.05■■□□□ 1.92
GSDMB-206ENST00000464556 NUP160Q12769 1436 aa27.03■■□□□ 1.92
GSDMB-206ENST00000464556 CEP170Q5SW79 1584 aa27.03■■□□□ 1.92
GSDMB-206ENST00000464556 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
GSDMB-206ENST00000464556 TRHP20396 242 aaPredicted RBP26.98■■□□□ 1.91
GSDMB-206ENST00000464556 ERCC6L2Q5T890 1561 aa26.93■■□□□ 1.9
GSDMB-206ENST00000464556 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
GSDMB-206ENST00000464556 IGF1RP08069 1367 aa26.85■■□□□ 1.89
GSDMB-206ENST00000464556 CUL7Q14999 1698 aa26.79■■□□□ 1.88
GSDMB-206ENST00000464556 RUSC2Q8N2Y8 1516 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms