RNA–Protein interactions for RNA: ENST00000464538.1

SLC5A6-214, Transcript of solute carrier family 5 member 6, humanhuman

TSL 4

Gene SLC5A6, Length 664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A6-214ENST00000464538 NISCHQ9Y2I1 1504 aa49.32■■■■■ 5.49
SLC5A6-214ENST00000464538 CCDC180Q9P1Z9 1646 aa44.13■■■■■ 4.66
SLC5A6-214ENST00000464538 ABCC9O60706 1549 aa44.1■■■■■ 4.65
SLC5A6-214ENST00000464538 RB1CC1Q8TDY2 1594 aa42■■■■■ 4.31
SLC5A6-214ENST00000464538 NACADO15069 1562 aa41.76■■■■■ 4.27
SLC5A6-214ENST00000464538 DCAF8L2P0C7V8 631 aa41.65■■■■■ 4.26
SLC5A6-214ENST00000464538 DNAJC5BQ9UF47 199 aa41.31■■■■■ 4.2
SLC5A6-214ENST00000464538 MYO15BQ96JP2 1530 aa41.22■■■■■ 4.19
SLC5A6-214ENST00000464538 PABPN1Q86U42 306 aaKnown RBP eCLIP41.12■■■■■ 4.17
SLC5A6-214ENST00000464538 UNC13AQ9UPW8 1703 aa40.98■■■■■ 4.15
SLC5A6-214ENST00000464538 ZCCHC6Q5VYS8 1495 aaKnown RBP40.9■■■■■ 4.14
SLC5A6-214ENST00000464538 BICRAQ9NZM4 1560 aa40.78■■■■■ 4.12
SLC5A6-214ENST00000464538 DCAF1Q9Y4B6 1507 aa40.73■■■■■ 4.11
SLC5A6-214ENST00000464538 SCRIBQ14160 1630 aa40.26■■■■■ 4.04
SLC5A6-214ENST00000464538 SHROOM4Q9ULL8 1493 aa40.23■■■■■ 4.03
SLC5A6-214ENST00000464538 CC2D2AQ9P2K1 1620 aa39.82■■■■□ 3.96
SLC5A6-214ENST00000464538 EIF4G1Q04637 1599 aaKnown RBP39.76■■■■□ 3.96
SLC5A6-214ENST00000464538 CECR2Q9BXF3 1484 aa39.71■■■■□ 3.95
SLC5A6-214ENST00000464538 NCAPD3P42695 1498 aa38.58■■■■□ 3.77
SLC5A6-214ENST00000464538 DNAJC5Q9H3Z4 198 aa38.49■■■■□ 3.75
SLC5A6-214ENST00000464538 ATAD2BQ9ULI0 1458 aa38.47■■■■□ 3.75
SLC5A6-214ENST00000464538 SMARCA4P51532 1647 aa38.42■■■■□ 3.74
SLC5A6-214ENST00000464538 SMARCA2P51531 1590 aa38.34■■■■□ 3.73
SLC5A6-214ENST00000464538 BAZ1AQ9NRL2 1556 aaPredicted RBP38.27■■■■□ 3.72
SLC5A6-214ENST00000464538 HMGXB3Q12766 1538 aa38.26■■■■□ 3.72
SLC5A6-214ENST00000464538 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
SLC5A6-214ENST00000464538 PEG3Q9GZU2 1588 aa38.06■■■■□ 3.68
SLC5A6-214ENST00000464538 ERCC6Q03468 1493 aa38.05■■■■□ 3.68
SLC5A6-214ENST00000464538 MROH2BQ7Z745 1585 aa38.01■■■■□ 3.67
SLC5A6-214ENST00000464538 CUX2O14529 1486 aa37.94■■■■□ 3.66
SLC5A6-214ENST00000464538 NESP48681 1621 aa37.91■■■■□ 3.66
SLC5A6-214ENST00000464538 LAMC3Q9Y6N6 1575 aa37.64■■■■□ 3.62
SLC5A6-214ENST00000464538 WIZO95785 1651 aa37.53■■■■□ 3.6
SLC5A6-214ENST00000464538 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
SLC5A6-214ENST00000464538 PDS5BQ9NTI5 1447 aa37.46■■■■□ 3.59
SLC5A6-214ENST00000464538 CADPSQ9ULU8 1353 aa37.42■■■■□ 3.58
SLC5A6-214ENST00000464538 KIF21AQ7Z4S6 1674 aa37.37■■■■□ 3.57
SLC5A6-214ENST00000464538 RSF1Q96T23 1441 aaPredicted RBP37.28■■■■□ 3.56
SLC5A6-214ENST00000464538 MRC2Q9UBG0 1479 aa37.11■■■■□ 3.53
SLC5A6-214ENST00000464538 TOP2AP11388 1531 aaKnown RBP37.07■■■■□ 3.53
SLC5A6-214ENST00000464538 CFTRP13569 1480 aa37.01■■■■□ 3.51
SLC5A6-214ENST00000464538 WDR62O43379 1518 aa37■■■■□ 3.51
SLC5A6-214ENST00000464538 CEP164Q9UPV0 1460 aa36.99■■■■□ 3.51
SLC5A6-214ENST00000464538 FANCD2Q9BXW9 1451 aa36.97■■■■□ 3.51
SLC5A6-214ENST00000464538 CCDC88BA6NC98 1476 aa36.69■■■■□ 3.46
SLC5A6-214ENST00000464538 URB2Q14146 1524 aaKnown RBP36.65■■■■□ 3.46
SLC5A6-214ENST00000464538 PRDM2Q13029 1718 aa36.53■■■■□ 3.44
SLC5A6-214ENST00000464538 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
SLC5A6-214ENST00000464538 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
SLC5A6-214ENST00000464538 TRIM41Q8WV44 630 aa36.26■■■■□ 3.4
SLC5A6-214ENST00000464538 IFT140Q96RY7 1462 aa36.25■■■■□ 3.39
SLC5A6-214ENST00000464538 ABCC8Q09428 1581 aa36.21■■■■□ 3.39
SLC5A6-214ENST00000464538 ZNF608Q9ULD9 1512 aaPredicted RBP36.19■■■■□ 3.38
SLC5A6-214ENST00000464538 DNMBPQ6XZF7 1577 aa36.14■■■■□ 3.38
SLC5A6-214ENST00000464538 EIF4G3O43432 1585 aaKnown RBP35.95■■■■□ 3.35
SLC5A6-214ENST00000464538 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
SLC5A6-214ENST00000464538 POLA1P09884 1462 aaPredicted RBP35.92■■■■□ 3.34
SLC5A6-214ENST00000464538 AQRO60306 1485 aaKnown RBP eCLIP35.9■■■■□ 3.342e-10■■■□□ 16.2
SLC5A6-214ENST00000464538 RAD54L2Q9Y4B4 1467 aa35.8■■■■□ 3.32
SLC5A6-214ENST00000464538 SOGA1O94964 1423 aa35.79■■■■□ 3.32
SLC5A6-214ENST00000464538 SUPT5HO00267 1087 aaKnown RBP35.76■■■■□ 3.32
SLC5A6-214ENST00000464538 FGD5Q6ZNL6 1462 aa35.72■■■■□ 3.31
SLC5A6-214ENST00000464538 RIMBP3CA6NJZ7 1639 aa35.72■■■■□ 3.31
SLC5A6-214ENST00000464538 RIMBP3BA6NNM3 1639 aa35.72■■■■□ 3.31
SLC5A6-214ENST00000464538 RIMBP3Q9UFD9 1639 aa35.72■■■■□ 3.31
SLC5A6-214ENST00000464538 TDRD9Q8NDG6 1382 aaKnown RBP35.71■■■■□ 3.31
SLC5A6-214ENST00000464538 CUX1P39880 1505 aa35.7■■■■□ 3.31
SLC5A6-214ENST00000464538 FBLN2P98095 1184 aa35.65■■■■□ 3.3
SLC5A6-214ENST00000464538 ARHGEF11O15085 1522 aa35.65■■■■□ 3.3
SLC5A6-214ENST00000464538 CHD1O14646 1710 aa35.63■■■■□ 3.29
SLC5A6-214ENST00000464538 WDR97A6NE52 1622 aa35.55■■■■□ 3.28
SLC5A6-214ENST00000464538 SNAPC4Q5SXM2 1469 aa35.51■■■■□ 3.28
SLC5A6-214ENST00000464538 GRIN2BQ13224 1484 aa35.44■■■■□ 3.26
SLC5A6-214ENST00000464538 CYB5RLQ6IPT4 315 aa35.43■■■■□ 3.26
SLC5A6-214ENST00000464538 MAGI1Q96QZ7 1491 aaPredicted RBP35.41■■■■□ 3.26
SLC5A6-214ENST00000464538 CHMP7Q8WUX9 453 aaPredicted RBP35.41■■■■□ 3.26
SLC5A6-214ENST00000464538 GAPVD1Q14C86 1478 aa35.34■■■■□ 3.25
SLC5A6-214ENST00000464538 ABCA10Q8WWZ4 1543 aa35.32■■■■□ 3.24
SLC5A6-214ENST00000464538 ARAP1Q96P48 1450 aa35.31■■■■□ 3.24
SLC5A6-214ENST00000464538 SYNJ2O15056 1496 aa35.3■■■■□ 3.24
SLC5A6-214ENST00000464538 CLASP1Q7Z460 1538 aa35.27■■■■□ 3.24
SLC5A6-214ENST00000464538 SYNJ1O43426 1573 aa35.25■■■■□ 3.23
SLC5A6-214ENST00000464538 PBRM1Q86U86 1689 aa35.24■■■■□ 3.23
SLC5A6-214ENST00000464538 ABCA5Q8WWZ7 1642 aa35.22■■■■□ 3.23
SLC5A6-214ENST00000464538 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
SLC5A6-214ENST00000464538 TOP2BQ02880 1626 aa35.14■■■■□ 3.22
SLC5A6-214ENST00000464538 BIVM-ERCC5R4GMW8 1640 aa35.12■■■■□ 3.21
SLC5A6-214ENST00000464538 TRHP20396 242 aaPredicted RBP34.99■■■■□ 3.19
SLC5A6-214ENST00000464538 GRIN2AQ12879 1464 aa34.98■■■■□ 3.19
SLC5A6-214ENST00000464538 ADAMTS12P58397 1594 aa34.95■■■■□ 3.18
SLC5A6-214ENST00000464538 FHAD1B1AJZ9 1412 aa34.89■■■■□ 3.18
SLC5A6-214ENST00000464538 NUP160Q12769 1436 aa34.87■■■■□ 3.17
SLC5A6-214ENST00000464538 ERICH3Q5RHP9 1530 aa34.86■■■■□ 3.17
SLC5A6-214ENST00000464538 CEP170Q5SW79 1584 aa34.83■■■■□ 3.17
SLC5A6-214ENST00000464538 ERCC6L2Q5T890 1561 aa34.74■■■■□ 3.15
SLC5A6-214ENST00000464538 SHROOM2Q13796 1616 aa34.66■■■■□ 3.14
SLC5A6-214ENST00000464538 JPH4Q96JJ6 628 aa34.55■■■■□ 3.12
SLC5A6-214ENST00000464538 PRG4Q92954 1404 aaPredicted RBP34.53■■■■□ 3.12
SLC5A6-214ENST00000464538 IGF1RP08069 1367 aa34.5■■■■□ 3.11
SLC5A6-214ENST00000464538 KIF27Q86VH2 1401 aa34.5■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms