RNA–Protein interactions for RNA: ENST00000464465.6

CSF3R-207, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 1,440 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-207ENST00000464465 NISCHQ9Y2I1 1504 aa30.57■■■□□ 2.48
CSF3R-207ENST00000464465 ABCC9O60706 1549 aa27.75■■■□□ 2.03
CSF3R-207ENST00000464465 CCDC180Q9P1Z9 1646 aa27.51■■□□□ 1.99
CSF3R-207ENST00000464465 RB1CC1Q8TDY2 1594 aa26.31■■□□□ 1.8
CSF3R-207ENST00000464465 DNAJC5BQ9UF47 199 aa26.26■■□□□ 1.79
CSF3R-207ENST00000464465 NACADO15069 1562 aa26.08■■□□□ 1.77
CSF3R-207ENST00000464465 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
CSF3R-207ENST00000464465 PABPN1Q86U42 306 aaKnown RBP eCLIP25.83■■□□□ 1.73
CSF3R-207ENST00000464465 UNC13AQ9UPW8 1703 aa25.69■■□□□ 1.7
CSF3R-207ENST00000464465 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
CSF3R-207ENST00000464465 BICRAQ9NZM4 1560 aa25.54■■□□□ 1.68
CSF3R-207ENST00000464465 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
CSF3R-207ENST00000464465 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
CSF3R-207ENST00000464465 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
CSF3R-207ENST00000464465 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
CSF3R-207ENST00000464465 CC2D2AQ9P2K1 1620 aa25.03■■□□□ 1.6
CSF3R-207ENST00000464465 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
CSF3R-207ENST00000464465 EIF4G1Q04637 1599 aaKnown RBP24.93■■□□□ 1.58
CSF3R-207ENST00000464465 DNAJC5Q9H3Z4 198 aa24.3■■□□□ 1.48
CSF3R-207ENST00000464465 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
CSF3R-207ENST00000464465 CUX2O14529 1486 aa24.01■■□□□ 1.43
CSF3R-207ENST00000464465 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
CSF3R-207ENST00000464465 ATAD2BQ9ULI0 1458 aa23.98■■□□□ 1.43
CSF3R-207ENST00000464465 SMARCA2P51531 1590 aa23.9■■□□□ 1.42
CSF3R-207ENST00000464465 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
CSF3R-207ENST00000464465 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
CSF3R-207ENST00000464465 NESP48681 1621 aa23.76■■□□□ 1.39
CSF3R-207ENST00000464465 BAZ1BQ9UIG0 1483 aaKnown RBP23.74■■□□□ 1.39
CSF3R-207ENST00000464465 BAZ1AQ9NRL2 1556 aaPredicted RBP23.74■■□□□ 1.39
CSF3R-207ENST00000464465 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.38
CSF3R-207ENST00000464465 LAMC3Q9Y6N6 1575 aa23.56■■□□□ 1.36
CSF3R-207ENST00000464465 MROH2BQ7Z745 1585 aa23.55■■□□□ 1.36
CSF3R-207ENST00000464465 THOC2Q8NI27 1593 aaKnown RBP23.54■■□□□ 1.36
CSF3R-207ENST00000464465 PDS5BQ9NTI5 1447 aa23.47■■□□□ 1.35
CSF3R-207ENST00000464465 KIF21AQ7Z4S6 1674 aa23.43■■□□□ 1.34
CSF3R-207ENST00000464465 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
CSF3R-207ENST00000464465 MRC2Q9UBG0 1479 aa23.25■■□□□ 1.31
CSF3R-207ENST00000464465 WIZO95785 1651 aa23.24■■□□□ 1.31
CSF3R-207ENST00000464465 WDR62O43379 1518 aa23.18■■□□□ 1.3
CSF3R-207ENST00000464465 TRIM41Q8WV44 630 aa23.13■■□□□ 1.29
CSF3R-207ENST00000464465 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
CSF3R-207ENST00000464465 FANCD2Q9BXW9 1451 aa23.08■■□□□ 1.29
CSF3R-207ENST00000464465 CFTRP13569 1480 aa23.02■■□□□ 1.28
CSF3R-207ENST00000464465 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
CSF3R-207ENST00000464465 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
CSF3R-207ENST00000464465 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
CSF3R-207ENST00000464465 URB2Q14146 1524 aaKnown RBP22.89■■□□□ 1.25
CSF3R-207ENST00000464465 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
CSF3R-207ENST00000464465 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
CSF3R-207ENST00000464465 IFT140Q96RY7 1462 aa22.67■■□□□ 1.22
CSF3R-207ENST00000464465 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.22
CSF3R-207ENST00000464465 TOPBP1Q92547 1522 aa22.61■■□□□ 1.21
CSF3R-207ENST00000464465 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
CSF3R-207ENST00000464465 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
CSF3R-207ENST00000464465 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
CSF3R-207ENST00000464465 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
CSF3R-207ENST00000464465 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
CSF3R-207ENST00000464465 ARHGEF11O15085 1522 aa22.49■■□□□ 1.19
CSF3R-207ENST00000464465 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
CSF3R-207ENST00000464465 AQRO60306 1485 aaKnown RBP eCLIP22.43■■□□□ 1.18
CSF3R-207ENST00000464465 TARBP1Q13395 1621 aaKnown RBP22.41■■□□□ 1.18
CSF3R-207ENST00000464465 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
CSF3R-207ENST00000464465 CHD1O14646 1710 aa22.37■■□□□ 1.17
CSF3R-207ENST00000464465 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
CSF3R-207ENST00000464465 FBLN2P98095 1184 aa22.36■■□□□ 1.17
CSF3R-207ENST00000464465 RAD54L2Q9Y4B4 1467 aa22.29■■□□□ 1.16
CSF3R-207ENST00000464465 SOGA1O94964 1423 aa22.29■■□□□ 1.16
CSF3R-207ENST00000464465 TDRD9Q8NDG6 1382 aaKnown RBP22.27■■□□□ 1.16
CSF3R-207ENST00000464465 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
CSF3R-207ENST00000464465 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
CSF3R-207ENST00000464465 FGD5Q6ZNL6 1462 aa22.19■■□□□ 1.14
CSF3R-207ENST00000464465 SNAPC4Q5SXM2 1469 aa22.18■■□□□ 1.14
CSF3R-207ENST00000464465 CHMP7Q8WUX9 453 aaPredicted RBP22.17■■□□□ 1.14
CSF3R-207ENST00000464465 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
CSF3R-207ENST00000464465 CUX1P39880 1505 aa22.14■■□□□ 1.13
CSF3R-207ENST00000464465 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
CSF3R-207ENST00000464465 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
CSF3R-207ENST00000464465 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
CSF3R-207ENST00000464465 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
CSF3R-207ENST00000464465 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
CSF3R-207ENST00000464465 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
CSF3R-207ENST00000464465 PBRM1Q86U86 1689 aa21.96■■□□□ 1.11
CSF3R-207ENST00000464465 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
CSF3R-207ENST00000464465 SUPT5HO00267 1087 aaKnown RBP21.89■■□□□ 1.1
CSF3R-207ENST00000464465 ABCA5Q8WWZ7 1642 aa21.89■■□□□ 1.09
CSF3R-207ENST00000464465 WRNQ14191 1432 aaPredicted RBP eCLIP21.82■■□□□ 1.08
CSF3R-207ENST00000464465 GRIN2AQ12879 1464 aa21.81■■□□□ 1.08
CSF3R-207ENST00000464465 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
CSF3R-207ENST00000464465 NUP160Q12769 1436 aa21.75■■□□□ 1.07
CSF3R-207ENST00000464465 ERCC6L2Q5T890 1561 aa21.75■■□□□ 1.07
CSF3R-207ENST00000464465 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
CSF3R-207ENST00000464465 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
CSF3R-207ENST00000464465 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
CSF3R-207ENST00000464465 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
CSF3R-207ENST00000464465 BIVM-ERCC5R4GMW8 1640 aa21.71■■□□□ 1.07
CSF3R-207ENST00000464465 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
CSF3R-207ENST00000464465 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
CSF3R-207ENST00000464465 JPH4Q96JJ6 628 aa21.57■■□□□ 1.04
CSF3R-207ENST00000464465 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
CSF3R-207ENST00000464465 KIF13AQ9H1H9 1805 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms