RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
UFM1-204ENST00000464423 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
UFM1-204ENST00000464423 ABCC9O60706 1549 aa37.27■■■■□ 3.56
UFM1-204ENST00000464423 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
UFM1-204ENST00000464423 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
UFM1-204ENST00000464423 NACADO15069 1562 aa35.68■■■■□ 3.3
UFM1-204ENST00000464423 ZCCHC6Q5VYS8 1495 aaKnown RBP35.65■■■■□ 3.3
UFM1-204ENST00000464423 MYO15BQ96JP2 1530 aa35.44■■■■□ 3.26
UFM1-204ENST00000464423 DCAF1Q9Y4B6 1507 aa35.32■■■■□ 3.25
UFM1-204ENST00000464423 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
UFM1-204ENST00000464423 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
UFM1-204ENST00000464423 SCRIBQ14160 1630 aa34.75■■■■□ 3.15
UFM1-204ENST00000464423 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
UFM1-204ENST00000464423 DNAJC5BQ9UF47 199 aa34.28■■■■□ 3.08
UFM1-204ENST00000464423 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.07
UFM1-204ENST00000464423 EIF4G1Q04637 1599 aaKnown RBP33.78■■■■□ 3
UFM1-204ENST00000464423 CC2D2AQ9P2K1 1620 aa33.65■■■□□ 2.98
UFM1-204ENST00000464423 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
UFM1-204ENST00000464423 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
UFM1-204ENST00000464423 BAZ1AQ9NRL2 1556 aaPredicted RBP33.13■■■□□ 2.89
UFM1-204ENST00000464423 MROH2BQ7Z745 1585 aa33.04■■■□□ 2.88
UFM1-204ENST00000464423 ATAD2BQ9ULI0 1458 aa33.03■■■□□ 2.88
UFM1-204ENST00000464423 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
UFM1-204ENST00000464423 SMARCA2P51531 1590 aa32.92■■■□□ 2.86
UFM1-204ENST00000464423 PEG3Q9GZU2 1588 aa32.82■■■□□ 2.84
UFM1-204ENST00000464423 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
UFM1-204ENST00000464423 BAZ1BQ9UIG0 1483 aaKnown RBP32.74■■■□□ 2.83
UFM1-204ENST00000464423 WIZO95785 1651 aa32.67■■■□□ 2.82
UFM1-204ENST00000464423 RSF1Q96T23 1441 aaPredicted RBP32.66■■■□□ 2.82
UFM1-204ENST00000464423 NESP48681 1621 aa32.28■■■□□ 2.76
UFM1-204ENST00000464423 TOP2AP11388 1531 aaKnown RBP32.27■■■□□ 2.76
UFM1-204ENST00000464423 ERCC6Q03468 1493 aa32.06■■■□□ 2.72
UFM1-204ENST00000464423 LAMC3Q9Y6N6 1575 aa32.06■■■□□ 2.72
UFM1-204ENST00000464423 CADPSQ9ULU8 1353 aa32.04■■■□□ 2.72
UFM1-204ENST00000464423 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
UFM1-204ENST00000464423 SUPT5HO00267 1087 aaKnown RBP31.92■■■□□ 2.7
UFM1-204ENST00000464423 PDS5BQ9NTI5 1447 aa31.86■■■□□ 2.69
UFM1-204ENST00000464423 CFTRP13569 1480 aa31.84■■■□□ 2.69
UFM1-204ENST00000464423 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
UFM1-204ENST00000464423 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
UFM1-204ENST00000464423 FANCD2Q9BXW9 1451 aa31.68■■■□□ 2.66
UFM1-204ENST00000464423 CUX2O14529 1486 aa31.65■■■□□ 2.66
UFM1-204ENST00000464423 CEP164Q9UPV0 1460 aa31.61■■■□□ 2.65
UFM1-204ENST00000464423 MRC2Q9UBG0 1479 aa31.57■■■□□ 2.64
UFM1-204ENST00000464423 PRDM2Q13029 1718 aa31.49■■■□□ 2.63
UFM1-204ENST00000464423 WDR62O43379 1518 aa31.45■■■□□ 2.63
UFM1-204ENST00000464423 URB2Q14146 1524 aaKnown RBP31.39■■■□□ 2.62
UFM1-204ENST00000464423 TOPBP1Q92547 1522 aa31.18■■■□□ 2.58
UFM1-204ENST00000464423 DNMBPQ6XZF7 1577 aa31.1■■■□□ 2.57
UFM1-204ENST00000464423 ABCC8Q09428 1581 aa31.07■■■□□ 2.56
UFM1-204ENST00000464423 CUX1P39880 1505 aa30.98■■■□□ 2.55
UFM1-204ENST00000464423 IFT140Q96RY7 1462 aa30.94■■■□□ 2.54
UFM1-204ENST00000464423 POLA1P09884 1462 aaPredicted RBP30.92■■■□□ 2.54
UFM1-204ENST00000464423 ZNF608Q9ULD9 1512 aaPredicted RBP30.89■■■□□ 2.54
UFM1-204ENST00000464423 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
UFM1-204ENST00000464423 RAD54L2Q9Y4B4 1467 aa30.84■■■□□ 2.53
UFM1-204ENST00000464423 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
UFM1-204ENST00000464423 SOGA1O94964 1423 aa30.8■■■□□ 2.52
UFM1-204ENST00000464423 WRNQ14191 1432 aaPredicted RBP eCLIP30.75■■■□□ 2.51
UFM1-204ENST00000464423 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
UFM1-204ENST00000464423 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
UFM1-204ENST00000464423 AQRO60306 1485 aaKnown RBP eCLIP30.71■■■□□ 2.511e-6■■■■■ 26.9
UFM1-204ENST00000464423 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.5
UFM1-204ENST00000464423 TDRD9Q8NDG6 1382 aaKnown RBP30.67■■■□□ 2.5
UFM1-204ENST00000464423 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
UFM1-204ENST00000464423 BIVM-ERCC5R4GMW8 1640 aa30.64■■■□□ 2.5
UFM1-204ENST00000464423 WDR97A6NE52 1622 aa30.54■■■□□ 2.48
UFM1-204ENST00000464423 ABCA10Q8WWZ4 1543 aa30.52■■■□□ 2.48
UFM1-204ENST00000464423 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
UFM1-204ENST00000464423 OSCARQ8IYS5 282 aa30.41■■■□□ 2.46
UFM1-204ENST00000464423 GRIN2BQ13224 1484 aa30.4■■■□□ 2.46
UFM1-204ENST00000464423 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
UFM1-204ENST00000464423 ABCA5Q8WWZ7 1642 aa30.4■■■□□ 2.46
UFM1-204ENST00000464423 FBLN2P98095 1184 aa30.35■■■□□ 2.45
UFM1-204ENST00000464423 PBRM1Q86U86 1689 aa30.32■■■□□ 2.44
UFM1-204ENST00000464423 CHD1O14646 1710 aa30.29■■■□□ 2.44
UFM1-204ENST00000464423 MAGI1Q96QZ7 1491 aaPredicted RBP30.29■■■□□ 2.44
UFM1-204ENST00000464423 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
UFM1-204ENST00000464423 SYNJ2O15056 1496 aa30.2■■■□□ 2.43
UFM1-204ENST00000464423 ERICH3Q5RHP9 1530 aa30.12■■■□□ 2.41
UFM1-204ENST00000464423 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
UFM1-204ENST00000464423 KIF27Q86VH2 1401 aa30.09■■■□□ 2.41
UFM1-204ENST00000464423 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
UFM1-204ENST00000464423 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
UFM1-204ENST00000464423 IGF1RP08069 1367 aa30.03■■■□□ 2.4
UFM1-204ENST00000464423 GRIN2AQ12879 1464 aa30.02■■■□□ 2.4
UFM1-204ENST00000464423 CLASP1Q7Z460 1538 aa29.98■■■□□ 2.39
UFM1-204ENST00000464423 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
UFM1-204ENST00000464423 ARHGEF11O15085 1522 aa29.92■■■□□ 2.38
UFM1-204ENST00000464423 RIMBP3CA6NJZ7 1639 aa29.92■■■□□ 2.38
UFM1-204ENST00000464423 RIMBP3BA6NNM3 1639 aa29.92■■■□□ 2.38
UFM1-204ENST00000464423 RIMBP3Q9UFD9 1639 aa29.92■■■□□ 2.38
UFM1-204ENST00000464423 CEP170Q5SW79 1584 aa29.9■■■□□ 2.38
UFM1-204ENST00000464423 NUP160Q12769 1436 aa29.88■■■□□ 2.37
UFM1-204ENST00000464423 CUL7Q14999 1698 aa29.83■■■□□ 2.37
UFM1-204ENST00000464423 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
UFM1-204ENST00000464423 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
UFM1-204ENST00000464423 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
UFM1-204ENST00000464423 CYB5RLQ6IPT4 315 aa29.7■■■□□ 2.35
UFM1-204ENST00000464423 ERCC6L2Q5T890 1561 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms