RNA–Protein interactions for RNA: ENST00000464422.1

NR1I3-212, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 3

Gene NR1I3, Length 480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-212ENST00000464422 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
NR1I3-212ENST00000464422 CCDC180Q9P1Z9 1646 aa28.14■■■□□ 2.09
NR1I3-212ENST00000464422 ABCC9O60706 1549 aa27.77■■■□□ 2.04
NR1I3-212ENST00000464422 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
NR1I3-212ENST00000464422 NACADO15069 1562 aa26.45■■□□□ 1.82
NR1I3-212ENST00000464422 UNC13AQ9UPW8 1703 aa26.19■■□□□ 1.78
NR1I3-212ENST00000464422 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
NR1I3-212ENST00000464422 DCAF8L2P0C7V8 631 aa26.08■■□□□ 1.77
NR1I3-212ENST00000464422 ZCCHC6Q5VYS8 1495 aaKnown RBP26.05■■□□□ 1.76
NR1I3-212ENST00000464422 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
NR1I3-212ENST00000464422 BICRAQ9NZM4 1560 aa25.9■■□□□ 1.74
NR1I3-212ENST00000464422 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
NR1I3-212ENST00000464422 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
NR1I3-212ENST00000464422 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
NR1I3-212ENST00000464422 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
NR1I3-212ENST00000464422 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
NR1I3-212ENST00000464422 EIF4G1Q04637 1599 aaKnown RBP25.18■■□□□ 1.62
NR1I3-212ENST00000464422 CECR2Q9BXF3 1484 aa24.99■■□□□ 1.59
NR1I3-212ENST00000464422 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
NR1I3-212ENST00000464422 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
NR1I3-212ENST00000464422 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
NR1I3-212ENST00000464422 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
NR1I3-212ENST00000464422 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
NR1I3-212ENST00000464422 HMGXB3Q12766 1538 aa24.28■■□□□ 1.48
NR1I3-212ENST00000464422 PEG3Q9GZU2 1588 aa24.24■■□□□ 1.47
NR1I3-212ENST00000464422 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
NR1I3-212ENST00000464422 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
NR1I3-212ENST00000464422 NESP48681 1621 aa23.98■■□□□ 1.43
NR1I3-212ENST00000464422 WIZO95785 1651 aa23.93■■□□□ 1.42
NR1I3-212ENST00000464422 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
NR1I3-212ENST00000464422 CUX2O14529 1486 aa23.86■■□□□ 1.41
NR1I3-212ENST00000464422 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
NR1I3-212ENST00000464422 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
NR1I3-212ENST00000464422 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
NR1I3-212ENST00000464422 RSF1Q96T23 1441 aaPredicted RBP23.69■■□□□ 1.38
NR1I3-212ENST00000464422 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
NR1I3-212ENST00000464422 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
NR1I3-212ENST00000464422 PDS5BQ9NTI5 1447 aa23.58■■□□□ 1.36
NR1I3-212ENST00000464422 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
NR1I3-212ENST00000464422 WDR62O43379 1518 aa23.44■■□□□ 1.34
NR1I3-212ENST00000464422 CFTRP13569 1480 aa23.43■■□□□ 1.34
NR1I3-212ENST00000464422 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
NR1I3-212ENST00000464422 PRDM2Q13029 1718 aa23.41■■□□□ 1.34
NR1I3-212ENST00000464422 CEP164Q9UPV0 1460 aa23.37■■□□□ 1.33
NR1I3-212ENST00000464422 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
NR1I3-212ENST00000464422 CCDC88BA6NC98 1476 aa23.29■■□□□ 1.32
NR1I3-212ENST00000464422 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
NR1I3-212ENST00000464422 TOPBP1Q92547 1522 aa22.98■■□□□ 1.27
NR1I3-212ENST00000464422 DNMBPQ6XZF7 1577 aa22.94■■□□□ 1.26
NR1I3-212ENST00000464422 ZNF608Q9ULD9 1512 aaPredicted RBP22.89■■□□□ 1.26
NR1I3-212ENST00000464422 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
NR1I3-212ENST00000464422 ABCC8Q09428 1581 aa22.88■■□□□ 1.25
NR1I3-212ENST00000464422 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
NR1I3-212ENST00000464422 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
NR1I3-212ENST00000464422 POLA1P09884 1462 aaPredicted RBP22.77■■□□□ 1.24
NR1I3-212ENST00000464422 CUX1P39880 1505 aa22.7■■□□□ 1.22
NR1I3-212ENST00000464422 CHD1O14646 1710 aa22.67■■□□□ 1.22
NR1I3-212ENST00000464422 OSCARQ8IYS5 282 aa22.66■■□□□ 1.22
NR1I3-212ENST00000464422 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
NR1I3-212ENST00000464422 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
NR1I3-212ENST00000464422 FGD5Q6ZNL6 1462 aa22.65■■□□□ 1.22
NR1I3-212ENST00000464422 WDR97A6NE52 1622 aa22.64■■□□□ 1.22
NR1I3-212ENST00000464422 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
NR1I3-212ENST00000464422 SOGA1O94964 1423 aa22.57■■□□□ 1.2
NR1I3-212ENST00000464422 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
NR1I3-212ENST00000464422 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
NR1I3-212ENST00000464422 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
NR1I3-212ENST00000464422 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
NR1I3-212ENST00000464422 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
NR1I3-212ENST00000464422 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
NR1I3-212ENST00000464422 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
NR1I3-212ENST00000464422 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
NR1I3-212ENST00000464422 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
NR1I3-212ENST00000464422 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
NR1I3-212ENST00000464422 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
NR1I3-212ENST00000464422 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
NR1I3-212ENST00000464422 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
NR1I3-212ENST00000464422 MAGI1Q96QZ7 1491 aaPredicted RBP22.4■■□□□ 1.18
NR1I3-212ENST00000464422 GRIN2BQ13224 1484 aa22.39■■□□□ 1.17
NR1I3-212ENST00000464422 CLASP1Q7Z460 1538 aa22.37■■□□□ 1.17
NR1I3-212ENST00000464422 GAPVD1Q14C86 1478 aa22.34■■□□□ 1.17
NR1I3-212ENST00000464422 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
NR1I3-212ENST00000464422 WRNQ14191 1432 aaPredicted RBP eCLIP22.31■■□□□ 1.16
NR1I3-212ENST00000464422 FBLN2P98095 1184 aa22.3■■□□□ 1.16
NR1I3-212ENST00000464422 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
NR1I3-212ENST00000464422 ADAMTS12P58397 1594 aa22.24■■□□□ 1.15
NR1I3-212ENST00000464422 CHMP7Q8WUX9 453 aaPredicted RBP22.19■■□□□ 1.14
NR1I3-212ENST00000464422 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
NR1I3-212ENST00000464422 ERICH3Q5RHP9 1530 aa22.13■■□□□ 1.13
NR1I3-212ENST00000464422 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
NR1I3-212ENST00000464422 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
NR1I3-212ENST00000464422 NUP160Q12769 1436 aa22.07■■□□□ 1.12
NR1I3-212ENST00000464422 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
NR1I3-212ENST00000464422 SHROOM2Q13796 1616 aa22.05■■□□□ 1.12
NR1I3-212ENST00000464422 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
NR1I3-212ENST00000464422 RUSC2Q8N2Y8 1516 aa21.94■■□□□ 1.1
NR1I3-212ENST00000464422 CUL7Q14999 1698 aa21.89■■□□□ 1.1
NR1I3-212ENST00000464422 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
NR1I3-212ENST00000464422 IGF1RP08069 1367 aa21.82■■□□□ 1.08
NR1I3-212ENST00000464422 PRG4Q92954 1404 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms