RNA–Protein interactions for RNA: ENST00000464421.2

GAPDHP50-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 50, humanhuman

BASIC

Gene GAPDHP50, Length 993 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP50-201ENST00000464421 NISCHQ9Y2I1 1504 aa20.57■□□□□ 0.88
GAPDHP50-201ENST00000464421 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
GAPDHP50-201ENST00000464421 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
GAPDHP50-201ENST00000464421 DCAF1Q9Y4B6 1507 aa17.09■□□□□ 0.33
GAPDHP50-201ENST00000464421 DCAF8L2P0C7V8 631 aa16.9■□□□□ 0.3
GAPDHP50-201ENST00000464421 MYO15BQ96JP2 1530 aa16.88■□□□□ 0.29
GAPDHP50-201ENST00000464421 ABCC9O60706 1549 aa16.76■□□□□ 0.27
GAPDHP50-201ENST00000464421 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
GAPDHP50-201ENST00000464421 NACADO15069 1562 aa16.68■□□□□ 0.26
GAPDHP50-201ENST00000464421 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
GAPDHP50-201ENST00000464421 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
GAPDHP50-201ENST00000464421 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
GAPDHP50-201ENST00000464421 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
GAPDHP50-201ENST00000464421 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
GAPDHP50-201ENST00000464421 RSF1Q96T23 1441 aaPredicted RBP15.99■□□□□ 0.15
GAPDHP50-201ENST00000464421 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
GAPDHP50-201ENST00000464421 CECR2Q9BXF3 1484 aa15.92■□□□□ 0.14
GAPDHP50-201ENST00000464421 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
GAPDHP50-201ENST00000464421 MROH2BQ7Z745 1585 aa15.85■□□□□ 0.13
GAPDHP50-201ENST00000464421 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
GAPDHP50-201ENST00000464421 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
GAPDHP50-201ENST00000464421 WIZO95785 1651 aa15.69■□□□□ 0.1
GAPDHP50-201ENST00000464421 AEBP2Q6ZN18 517 aaPredicted RBP15.68■□□□□ 0.1
GAPDHP50-201ENST00000464421 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
GAPDHP50-201ENST00000464421 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
GAPDHP50-201ENST00000464421 SMARCA2P51531 1590 aa15.52■□□□□ 0.07
GAPDHP50-201ENST00000464421 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
GAPDHP50-201ENST00000464421 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
GAPDHP50-201ENST00000464421 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
GAPDHP50-201ENST00000464421 NCAPD3P42695 1498 aa15.42■□□□□ 0.06
GAPDHP50-201ENST00000464421 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
GAPDHP50-201ENST00000464421 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
GAPDHP50-201ENST00000464421 TRIM41Q8WV44 630 aa15.29■□□□□ 0.04
GAPDHP50-201ENST00000464421 CC2D2AQ9P2K1 1620 aa15.19■□□□□ 0.02
GAPDHP50-201ENST00000464421 CFTRP13569 1480 aa15.07■□□□□ 0
GAPDHP50-201ENST00000464421 ABCC8Q09428 1581 aa15.04■□□□□ -0
GAPDHP50-201ENST00000464421 WRNQ14191 1432 aaPredicted RBP eCLIP15.04■□□□□ -0
GAPDHP50-201ENST00000464421 CADPSQ9ULU8 1353 aa15.01□□□□□ -0.01
GAPDHP50-201ENST00000464421 LOC105371045A0A1W2PR82 267 aa14.96□□□□□ -0.01
GAPDHP50-201ENST00000464421 EEA1Q15075 1411 aa14.96□□□□□ -0.01
GAPDHP50-201ENST00000464421 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
GAPDHP50-201ENST00000464421 PRDM2Q13029 1718 aa14.91□□□□□ -0.02
GAPDHP50-201ENST00000464421 FAM9AQ8IZU1 332 aaPredicted RBP14.9□□□□□ -0.02
GAPDHP50-201ENST00000464421 TOP2BQ02880 1626 aa14.9□□□□□ -0.02
GAPDHP50-201ENST00000464421 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
GAPDHP50-201ENST00000464421 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
GAPDHP50-201ENST00000464421 LAMC3Q9Y6N6 1575 aa14.84□□□□□ -0.03
GAPDHP50-201ENST00000464421 SOGA1O94964 1423 aa14.83□□□□□ -0.03
GAPDHP50-201ENST00000464421 CUX1P39880 1505 aa14.82□□□□□ -0.04
GAPDHP50-201ENST00000464421 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
GAPDHP50-201ENST00000464421 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
GAPDHP50-201ENST00000464421 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
GAPDHP50-201ENST00000464421 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
GAPDHP50-201ENST00000464421 NESP48681 1621 aa14.73□□□□□ -0.05
GAPDHP50-201ENST00000464421 TNIKQ9UKE5 1360 aa14.7□□□□□ -0.06
GAPDHP50-201ENST00000464421 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
GAPDHP50-201ENST00000464421 CEP164Q9UPV0 1460 aa14.69□□□□□ -0.06
GAPDHP50-201ENST00000464421 KIF21BO75037 1637 aa14.68□□□□□ -0.06
GAPDHP50-201ENST00000464421 GOLGA3Q08378 1498 aa14.68□□□□□ -0.06
GAPDHP50-201ENST00000464421 DNMBPQ6XZF7 1577 aa14.68□□□□□ -0.06
GAPDHP50-201ENST00000464421 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
GAPDHP50-201ENST00000464421 FGD5Q6ZNL6 1462 aa14.64□□□□□ -0.07
GAPDHP50-201ENST00000464421 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
GAPDHP50-201ENST00000464421 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
GAPDHP50-201ENST00000464421 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
GAPDHP50-201ENST00000464421 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
GAPDHP50-201ENST00000464421 ERICH3Q5RHP9 1530 aa14.59□□□□□ -0.07
GAPDHP50-201ENST00000464421 CUX2O14529 1486 aa14.57□□□□□ -0.08
GAPDHP50-201ENST00000464421 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
GAPDHP50-201ENST00000464421 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
GAPDHP50-201ENST00000464421 IGF1RP08069 1367 aa14.56□□□□□ -0.08
GAPDHP50-201ENST00000464421 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
GAPDHP50-201ENST00000464421 RAPGEF2Q9Y4G8 1499 aa14.53□□□□□ -0.08
GAPDHP50-201ENST00000464421 KIF21AQ7Z4S6 1674 aa14.52□□□□□ -0.08
GAPDHP50-201ENST00000464421 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
GAPDHP50-201ENST00000464421 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
GAPDHP50-201ENST00000464421 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
GAPDHP50-201ENST00000464421 TRIM26Q12899 539 aaPredicted RBP14.44□□□□□ -0.1
GAPDHP50-201ENST00000464421 CLIP1P30622 1438 aa14.43□□□□□ -0.1
GAPDHP50-201ENST00000464421 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
GAPDHP50-201ENST00000464421 WDR62O43379 1518 aa14.42□□□□□ -0.1
GAPDHP50-201ENST00000464421 TARBP1Q13395 1621 aaKnown RBP14.4□□□□□ -0.1
GAPDHP50-201ENST00000464421 CUL7Q14999 1698 aa14.39□□□□□ -0.11
GAPDHP50-201ENST00000464421 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
GAPDHP50-201ENST00000464421 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
GAPDHP50-201ENST00000464421 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
GAPDHP50-201ENST00000464421 IFT140Q96RY7 1462 aa14.38□□□□□ -0.11
GAPDHP50-201ENST00000464421 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
GAPDHP50-201ENST00000464421 PCGF6Q9BYE7 350 aa14.35□□□□□ -0.11
GAPDHP50-201ENST00000464421 VPS8Q8N3P4 1428 aa14.33□□□□□ -0.11
GAPDHP50-201ENST00000464421 THOC2Q8NI27 1593 aaKnown RBP14.3□□□□□ -0.12
GAPDHP50-201ENST00000464421 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
GAPDHP50-201ENST00000464421 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.12
GAPDHP50-201ENST00000464421 AQRO60306 1485 aaKnown RBP eCLIP14.25□□□□□ -0.13
GAPDHP50-201ENST00000464421 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
GAPDHP50-201ENST00000464421 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
GAPDHP50-201ENST00000464421 APLP2Q06481 763 aa14.24□□□□□ -0.13
GAPDHP50-201ENST00000464421 RANGAP1P46060 587 aaPredicted RBP14.22□□□□□ -0.13
GAPDHP50-201ENST00000464421 PBRM1Q86U86 1689 aa14.22□□□□□ -0.13
GAPDHP50-201ENST00000464421 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms