RNA–Protein interactions for RNA: ENST00000464365.2

CSF3R-206, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 1,659 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-206ENST00000464365 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
CSF3R-206ENST00000464365 CCDC180Q9P1Z9 1646 aa26.37■■□□□ 1.81
CSF3R-206ENST00000464365 ABCC9O60706 1549 aa25.43■■□□□ 1.66
CSF3R-206ENST00000464365 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
CSF3R-206ENST00000464365 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
CSF3R-206ENST00000464365 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
CSF3R-206ENST00000464365 MYO15BQ96JP2 1530 aa24.72■■□□□ 1.55
CSF3R-206ENST00000464365 NACADO15069 1562 aa24.72■■□□□ 1.55
CSF3R-206ENST00000464365 RB1CC1Q8TDY2 1594 aa24.62■■□□□ 1.53
CSF3R-206ENST00000464365 SCRIBQ14160 1630 aa24.2■■□□□ 1.46
CSF3R-206ENST00000464365 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
CSF3R-206ENST00000464365 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
CSF3R-206ENST00000464365 PABPN1Q86U42 306 aaKnown RBP eCLIP23.92■■□□□ 1.424e-7■■□□□ 12.2
CSF3R-206ENST00000464365 BICRAQ9NZM4 1560 aa23.85■■□□□ 1.41
CSF3R-206ENST00000464365 CECR2Q9BXF3 1484 aa23.38■■□□□ 1.33
CSF3R-206ENST00000464365 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
CSF3R-206ENST00000464365 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
CSF3R-206ENST00000464365 EIF4G1Q04637 1599 aaKnown RBP23.19■■□□□ 1.3
CSF3R-206ENST00000464365 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
CSF3R-206ENST00000464365 SMARCA4P51532 1647 aa23.16■■□□□ 1.3
CSF3R-206ENST00000464365 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
CSF3R-206ENST00000464365 SUPT5HO00267 1087 aaKnown RBP23.07■■□□□ 1.28
CSF3R-206ENST00000464365 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
CSF3R-206ENST00000464365 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
CSF3R-206ENST00000464365 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
CSF3R-206ENST00000464365 WIZO95785 1651 aa22.93■■□□□ 1.26
CSF3R-206ENST00000464365 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
CSF3R-206ENST00000464365 PEG3Q9GZU2 1588 aa22.89■■□□□ 1.26
CSF3R-206ENST00000464365 NCAPD3P42695 1498 aa22.84■■□□□ 1.25
CSF3R-206ENST00000464365 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
CSF3R-206ENST00000464365 CHIC1Q5VXU3 224 aa22.76■■□□□ 1.23
CSF3R-206ENST00000464365 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
CSF3R-206ENST00000464365 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
CSF3R-206ENST00000464365 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
CSF3R-206ENST00000464365 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
CSF3R-206ENST00000464365 CFTRP13569 1480 aa22.19■■□□□ 1.14
CSF3R-206ENST00000464365 NESP48681 1621 aa22.16■■□□□ 1.14
CSF3R-206ENST00000464365 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
CSF3R-206ENST00000464365 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
CSF3R-206ENST00000464365 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
CSF3R-206ENST00000464365 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
CSF3R-206ENST00000464365 CEP164Q9UPV0 1460 aa21.88■■□□□ 1.09
CSF3R-206ENST00000464365 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
CSF3R-206ENST00000464365 KIF21AQ7Z4S6 1674 aa21.83■■□□□ 1.09
CSF3R-206ENST00000464365 ABCC8Q09428 1581 aa21.83■■□□□ 1.08
CSF3R-206ENST00000464365 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
CSF3R-206ENST00000464365 TRIM41Q8WV44 630 aa21.74■■□□□ 1.07
CSF3R-206ENST00000464365 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
CSF3R-206ENST00000464365 CUX1P39880 1505 aa21.7■■□□□ 1.06
CSF3R-206ENST00000464365 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
CSF3R-206ENST00000464365 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
CSF3R-206ENST00000464365 TOPBP1Q92547 1522 aa21.66■■□□□ 1.06
CSF3R-206ENST00000464365 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
CSF3R-206ENST00000464365 TOP2BQ02880 1626 aa21.63■■□□□ 1.05
CSF3R-206ENST00000464365 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
CSF3R-206ENST00000464365 WDR62O43379 1518 aa21.6■■□□□ 1.05
CSF3R-206ENST00000464365 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
CSF3R-206ENST00000464365 FGD5Q6ZNL6 1462 aa21.55■■□□□ 1.04
CSF3R-206ENST00000464365 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.03
CSF3R-206ENST00000464365 SOGA1O94964 1423 aa21.49■■□□□ 1.03
CSF3R-206ENST00000464365 RAD54L2Q9Y4B4 1467 aa21.46■■□□□ 1.03
CSF3R-206ENST00000464365 CUX2O14529 1486 aa21.44■■□□□ 1.02
CSF3R-206ENST00000464365 IFT140Q96RY7 1462 aa21.39■■□□□ 1.01
CSF3R-206ENST00000464365 ABCA10Q8WWZ4 1543 aa21.35■■□□□ 1.01
CSF3R-206ENST00000464365 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
CSF3R-206ENST00000464365 FAM9AQ8IZU1 332 aaPredicted RBP21.33■■□□□ 1
CSF3R-206ENST00000464365 TDRD9Q8NDG6 1382 aaKnown RBP21.32■■□□□ 1
CSF3R-206ENST00000464365 KIF27Q86VH2 1401 aa21.3■■□□□ 1
CSF3R-206ENST00000464365 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
CSF3R-206ENST00000464365 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
CSF3R-206ENST00000464365 AQRO60306 1485 aaKnown RBP eCLIP21.25■□□□□ 0.99
CSF3R-206ENST00000464365 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
CSF3R-206ENST00000464365 EEA1Q15075 1411 aa21.23■□□□□ 0.99
CSF3R-206ENST00000464365 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
CSF3R-206ENST00000464365 CSRNP3Q8WYN3 585 aa21.21■□□□□ 0.99
CSF3R-206ENST00000464365 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
CSF3R-206ENST00000464365 IGF1RP08069 1367 aa21.17■□□□□ 0.98
CSF3R-206ENST00000464365 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
CSF3R-206ENST00000464365 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
CSF3R-206ENST00000464365 ERICH3Q5RHP9 1530 aa21.09■□□□□ 0.97
CSF3R-206ENST00000464365 PBRM1Q86U86 1689 aa21.06■□□□□ 0.96
CSF3R-206ENST00000464365 CARMIL1Q5VZK9 1371 aa21.06■□□□□ 0.96
CSF3R-206ENST00000464365 EHMT2Q96KQ7 1210 aa21.04■□□□□ 0.96
CSF3R-206ENST00000464365 SNAPC4Q5SXM2 1469 aa21.03■□□□□ 0.96
CSF3R-206ENST00000464365 PRXQ9BXM0 1461 aa21■□□□□ 0.95
CSF3R-206ENST00000464365 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
CSF3R-206ENST00000464365 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
CSF3R-206ENST00000464365 CUL7Q14999 1698 aa20.98■□□□□ 0.95
CSF3R-206ENST00000464365 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
CSF3R-206ENST00000464365 FBLN2P98095 1184 aa20.96■□□□□ 0.95
CSF3R-206ENST00000464365 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
CSF3R-206ENST00000464365 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
CSF3R-206ENST00000464365 ADAMTS12P58397 1594 aa20.94■□□□□ 0.94
CSF3R-206ENST00000464365 KIF21BO75037 1637 aa20.93■□□□□ 0.94
CSF3R-206ENST00000464365 SYNJ2O15056 1496 aa20.92■□□□□ 0.94
CSF3R-206ENST00000464365 GOLGA3Q08378 1498 aa20.9■□□□□ 0.94
CSF3R-206ENST00000464365 UBTFP17480 764 aaKnown RBP20.9■□□□□ 0.94
CSF3R-206ENST00000464365 GRIN2AQ12879 1464 aa20.85■□□□□ 0.93
CSF3R-206ENST00000464365 CHD1O14646 1710 aa20.77■□□□□ 0.91
CSF3R-206ENST00000464365 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms