RNA–Protein interactions for RNA: ENST00000464323.1

TFAP2A-206, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 2

Gene TFAP2A, Length 1,387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-206ENST00000464323 NISCHQ9Y2I1 1504 aa36.62■■■■□ 3.45
TFAP2A-206ENST00000464323 CCDC180Q9P1Z9 1646 aa32.78■■■□□ 2.84
TFAP2A-206ENST00000464323 ABCC9O60706 1549 aa32.38■■■□□ 2.77
TFAP2A-206ENST00000464323 RB1CC1Q8TDY2 1594 aa30.99■■■□□ 2.55
TFAP2A-206ENST00000464323 NACADO15069 1562 aa30.87■■■□□ 2.53
TFAP2A-206ENST00000464323 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
TFAP2A-206ENST00000464323 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
TFAP2A-206ENST00000464323 ZCCHC6Q5VYS8 1495 aaKnown RBP30.45■■■□□ 2.47
TFAP2A-206ENST00000464323 UNC13AQ9UPW8 1703 aa30.38■■■□□ 2.45
TFAP2A-206ENST00000464323 DCAF1Q9Y4B6 1507 aa30.31■■■□□ 2.44
TFAP2A-206ENST00000464323 BICRAQ9NZM4 1560 aa30.15■■■□□ 2.42
TFAP2A-206ENST00000464323 PABPN1Q86U42 306 aaKnown RBP eCLIP30.15■■■□□ 2.42
TFAP2A-206ENST00000464323 DNAJC5BQ9UF47 199 aa30.13■■■□□ 2.41
TFAP2A-206ENST00000464323 SCRIBQ14160 1630 aa29.82■■■□□ 2.36
TFAP2A-206ENST00000464323 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
TFAP2A-206ENST00000464323 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
TFAP2A-206ENST00000464323 CC2D2AQ9P2K1 1620 aa29.32■■■□□ 2.28
TFAP2A-206ENST00000464323 CECR2Q9BXF3 1484 aa29.15■■■□□ 2.26
TFAP2A-206ENST00000464323 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
TFAP2A-206ENST00000464323 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
TFAP2A-206ENST00000464323 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
TFAP2A-206ENST00000464323 BAZ1AQ9NRL2 1556 aaPredicted RBP28.4■■■□□ 2.14
TFAP2A-206ENST00000464323 SMARCA2P51531 1590 aa28.37■■■□□ 2.13
TFAP2A-206ENST00000464323 HMGXB3Q12766 1538 aa28.34■■■□□ 2.13
TFAP2A-206ENST00000464323 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
TFAP2A-206ENST00000464323 MROH2BQ7Z745 1585 aa28.22■■■□□ 2.11
TFAP2A-206ENST00000464323 BAZ1BQ9UIG0 1483 aaKnown RBP28.16■■■□□ 2.1
TFAP2A-206ENST00000464323 NESP48681 1621 aa27.94■■■□□ 2.06
TFAP2A-206ENST00000464323 ERCC6Q03468 1493 aa27.9■■■□□ 2.06
TFAP2A-206ENST00000464323 WIZO95785 1651 aa27.89■■■□□ 2.06
TFAP2A-206ENST00000464323 CUX2O14529 1486 aa27.82■■■□□ 2.04
TFAP2A-206ENST00000464323 LAMC3Q9Y6N6 1575 aa27.81■■■□□ 2.04
TFAP2A-206ENST00000464323 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
TFAP2A-206ENST00000464323 THOC2Q8NI27 1593 aaKnown RBP27.66■■■□□ 2.02
TFAP2A-206ENST00000464323 KIF21AQ7Z4S6 1674 aa27.63■■■□□ 2.01
TFAP2A-206ENST00000464323 CADPSQ9ULU8 1353 aa27.61■■■□□ 2.01
TFAP2A-206ENST00000464323 PDS5BQ9NTI5 1447 aa27.58■■■□□ 2.01
TFAP2A-206ENST00000464323 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
TFAP2A-206ENST00000464323 DNAJC5Q9H3Z4 198 aa27.41■■□□□ 1.98
TFAP2A-206ENST00000464323 CFTRP13569 1480 aa27.4■■□□□ 1.98
TFAP2A-206ENST00000464323 MRC2Q9UBG0 1479 aa27.36■■□□□ 1.97
TFAP2A-206ENST00000464323 WDR62O43379 1518 aa27.33■■□□□ 1.97
TFAP2A-206ENST00000464323 FANCD2Q9BXW9 1451 aa27.3■■□□□ 1.96
TFAP2A-206ENST00000464323 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
TFAP2A-206ENST00000464323 CCDC88BA6NC98 1476 aa27.23■■□□□ 1.95
TFAP2A-206ENST00000464323 PRDM2Q13029 1718 aa27.2■■□□□ 1.95
TFAP2A-206ENST00000464323 URB2Q14146 1524 aaKnown RBP27.09■■□□□ 1.93
TFAP2A-206ENST00000464323 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
TFAP2A-206ENST00000464323 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
TFAP2A-206ENST00000464323 DNMBPQ6XZF7 1577 aa26.78■■□□□ 1.88
TFAP2A-206ENST00000464323 ABCC8Q09428 1581 aa26.77■■□□□ 1.88
TFAP2A-206ENST00000464323 IFT140Q96RY7 1462 aa26.75■■□□□ 1.87
TFAP2A-206ENST00000464323 ZNF608Q9ULD9 1512 aaPredicted RBP26.69■■□□□ 1.86
TFAP2A-206ENST00000464323 TARBP1Q13395 1621 aaKnown RBP26.62■■□□□ 1.85
TFAP2A-206ENST00000464323 EIF4G3O43432 1585 aaKnown RBP26.59■■□□□ 1.85
TFAP2A-206ENST00000464323 POLA1P09884 1462 aaPredicted RBP26.59■■□□□ 1.85
TFAP2A-206ENST00000464323 OSCARQ8IYS5 282 aa26.5■■□□□ 1.83
TFAP2A-206ENST00000464323 CUX1P39880 1505 aa26.5■■□□□ 1.83
TFAP2A-206ENST00000464323 AQRO60306 1485 aaKnown RBP eCLIP26.46■■□□□ 1.83
TFAP2A-206ENST00000464323 RAD54L2Q9Y4B4 1467 aa26.46■■□□□ 1.83
TFAP2A-206ENST00000464323 FGD5Q6ZNL6 1462 aa26.45■■□□□ 1.82
TFAP2A-206ENST00000464323 SOGA1O94964 1423 aa26.41■■□□□ 1.82
TFAP2A-206ENST00000464323 WDR97A6NE52 1622 aa26.37■■□□□ 1.81
TFAP2A-206ENST00000464323 CHD1O14646 1710 aa26.33■■□□□ 1.81
TFAP2A-206ENST00000464323 TDRD9Q8NDG6 1382 aaKnown RBP26.32■■□□□ 1.8
TFAP2A-206ENST00000464323 TRIM41Q8WV44 630 aa26.25■■□□□ 1.79
TFAP2A-206ENST00000464323 RIMBP3CA6NJZ7 1639 aa26.24■■□□□ 1.79
TFAP2A-206ENST00000464323 RIMBP3BA6NNM3 1639 aa26.24■■□□□ 1.79
TFAP2A-206ENST00000464323 RIMBP3Q9UFD9 1639 aa26.24■■□□□ 1.79
TFAP2A-206ENST00000464323 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
TFAP2A-206ENST00000464323 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
TFAP2A-206ENST00000464323 BIVM-ERCC5R4GMW8 1640 aa26.18■■□□□ 1.78
TFAP2A-206ENST00000464323 ARHGEF11O15085 1522 aa26.18■■□□□ 1.78
TFAP2A-206ENST00000464323 GRIN2BQ13224 1484 aa26.18■■□□□ 1.78
TFAP2A-206ENST00000464323 MAGI1Q96QZ7 1491 aaPredicted RBP26.17■■□□□ 1.78
TFAP2A-206ENST00000464323 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
TFAP2A-206ENST00000464323 ABCA5Q8WWZ7 1642 aa26.16■■□□□ 1.78
TFAP2A-206ENST00000464323 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
TFAP2A-206ENST00000464323 SYNJ1O43426 1573 aa26.15■■□□□ 1.78
TFAP2A-206ENST00000464323 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.77
TFAP2A-206ENST00000464323 GAPVD1Q14C86 1478 aa26.12■■□□□ 1.77
TFAP2A-206ENST00000464323 FBLN2P98095 1184 aa26.1■■□□□ 1.77
TFAP2A-206ENST00000464323 SYNJ2O15056 1496 aa26.07■■□□□ 1.76
TFAP2A-206ENST00000464323 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
TFAP2A-206ENST00000464323 CHMP7Q8WUX9 453 aaPredicted RBP26■■□□□ 1.75
TFAP2A-206ENST00000464323 ARAP1Q96P48 1450 aa25.95■■□□□ 1.74
TFAP2A-206ENST00000464323 ADAMTS12P58397 1594 aa25.92■■□□□ 1.74
TFAP2A-206ENST00000464323 GRIN2AQ12879 1464 aa25.87■■□□□ 1.73
TFAP2A-206ENST00000464323 ERICH3Q5RHP9 1530 aa25.86■■□□□ 1.73
TFAP2A-206ENST00000464323 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
TFAP2A-206ENST00000464323 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
TFAP2A-206ENST00000464323 NUP160Q12769 1436 aa25.79■■□□□ 1.72
TFAP2A-206ENST00000464323 CEP170Q5SW79 1584 aa25.78■■□□□ 1.72
TFAP2A-206ENST00000464323 SHROOM2Q13796 1616 aa25.68■■□□□ 1.7
TFAP2A-206ENST00000464323 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
TFAP2A-206ENST00000464323 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
TFAP2A-206ENST00000464323 IGF1RP08069 1367 aa25.57■■□□□ 1.68
TFAP2A-206ENST00000464323 RUSC2Q8N2Y8 1516 aa25.56■■□□□ 1.68
TFAP2A-206ENST00000464323 CUL7Q14999 1698 aa25.55■■□□□ 1.68
TFAP2A-206ENST00000464323 PRG4Q92954 1404 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms