RNA–Protein interactions for RNA: ENST00000464308.1

POLR2M-204, Transcript of RNA polymerase II subunit M, humanhuman

TSL 3

Gene POLR2M, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-204ENST00000464308 NISCHQ9Y2I1 1504 aa40.87■■■■■ 4.13
POLR2M-204ENST00000464308 ABCC9O60706 1549 aa37.3■■■■□ 3.56
POLR2M-204ENST00000464308 CCDC180Q9P1Z9 1646 aa36.87■■■■□ 3.49
POLR2M-204ENST00000464308 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
POLR2M-204ENST00000464308 RB1CC1Q8TDY2 1594 aa35.3■■■■□ 3.24
POLR2M-204ENST00000464308 NACADO15069 1562 aa34.93■■■■□ 3.18
POLR2M-204ENST00000464308 DCAF8L2P0C7V8 631 aa34.77■■■■□ 3.16
POLR2M-204ENST00000464308 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
POLR2M-204ENST00000464308 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
POLR2M-204ENST00000464308 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
POLR2M-204ENST00000464308 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
POLR2M-204ENST00000464308 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■■□ 3
POLR2M-204ENST00000464308 SHROOM4Q9ULL8 1493 aa33.7■■■□□ 2.99
POLR2M-204ENST00000464308 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
POLR2M-204ENST00000464308 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
POLR2M-204ENST00000464308 CECR2Q9BXF3 1484 aa33.62■■■□□ 2.97
POLR2M-204ENST00000464308 SCRIBQ14160 1630 aa33.61■■■□□ 2.97
POLR2M-204ENST00000464308 EIF4G1Q04637 1599 aaKnown RBP33.47■■■□□ 2.95
POLR2M-204ENST00000464308 DNAJC5Q9H3Z4 198 aa32.72■■■□□ 2.83
POLR2M-204ENST00000464308 CUX2O14529 1486 aa32.26■■■□□ 2.75
POLR2M-204ENST00000464308 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
POLR2M-204ENST00000464308 ERCC6Q03468 1493 aa32.23■■■□□ 2.75
POLR2M-204ENST00000464308 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
POLR2M-204ENST00000464308 SMARCA2P51531 1590 aa31.99■■■□□ 2.71
POLR2M-204ENST00000464308 SMARCA4P51532 1647 aa31.99■■■□□ 2.71
POLR2M-204ENST00000464308 HMGXB3Q12766 1538 aa31.96■■■□□ 2.71
POLR2M-204ENST00000464308 NESP48681 1621 aa31.93■■■□□ 2.7
POLR2M-204ENST00000464308 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
POLR2M-204ENST00000464308 BAZ1AQ9NRL2 1556 aaPredicted RBP31.75■■■□□ 2.67
POLR2M-204ENST00000464308 THOC2Q8NI27 1593 aaKnown RBP31.67■■■□□ 2.66
POLR2M-204ENST00000464308 PEG3Q9GZU2 1588 aa31.64■■■□□ 2.65
POLR2M-204ENST00000464308 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
POLR2M-204ENST00000464308 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
POLR2M-204ENST00000464308 MROH2BQ7Z745 1585 aa31.51■■■□□ 2.63
POLR2M-204ENST00000464308 PDS5BQ9NTI5 1447 aa31.42■■■□□ 2.62
POLR2M-204ENST00000464308 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
POLR2M-204ENST00000464308 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
POLR2M-204ENST00000464308 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
POLR2M-204ENST00000464308 WIZO95785 1651 aa31.16■■■□□ 2.58
POLR2M-204ENST00000464308 WDR62O43379 1518 aa31.12■■■□□ 2.57
POLR2M-204ENST00000464308 CEP164Q9UPV0 1460 aa30.99■■■□□ 2.55
POLR2M-204ENST00000464308 FANCD2Q9BXW9 1451 aa30.92■■■□□ 2.54
POLR2M-204ENST00000464308 CFTRP13569 1480 aa30.8■■■□□ 2.52
POLR2M-204ENST00000464308 OSCARQ8IYS5 282 aa30.75■■■□□ 2.51
POLR2M-204ENST00000464308 URB2Q14146 1524 aaKnown RBP30.69■■■□□ 2.5
POLR2M-204ENST00000464308 RSF1Q96T23 1441 aaPredicted RBP30.68■■■□□ 2.5
POLR2M-204ENST00000464308 TOP2AP11388 1531 aaKnown RBP30.68■■■□□ 2.5
POLR2M-204ENST00000464308 PRDM2Q13029 1718 aa30.56■■■□□ 2.48
POLR2M-204ENST00000464308 RIMBP3CA6NJZ7 1639 aa30.43■■■□□ 2.46
POLR2M-204ENST00000464308 RIMBP3BA6NNM3 1639 aa30.43■■■□□ 2.46
POLR2M-204ENST00000464308 RIMBP3Q9UFD9 1639 aa30.43■■■□□ 2.46
POLR2M-204ENST00000464308 ZNF608Q9ULD9 1512 aaPredicted RBP30.39■■■□□ 2.46
POLR2M-204ENST00000464308 IFT140Q96RY7 1462 aa30.38■■■□□ 2.45
POLR2M-204ENST00000464308 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
POLR2M-204ENST00000464308 TOPBP1Q92547 1522 aa30.3■■■□□ 2.44
POLR2M-204ENST00000464308 ARHGEF11O15085 1522 aa30.26■■■□□ 2.43
POLR2M-204ENST00000464308 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
POLR2M-204ENST00000464308 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
POLR2M-204ENST00000464308 DNMBPQ6XZF7 1577 aa30.14■■■□□ 2.42
POLR2M-204ENST00000464308 CHD1O14646 1710 aa30.12■■■□□ 2.41
POLR2M-204ENST00000464308 CYB5RLQ6IPT4 315 aa30.09■■■□□ 2.41
POLR2M-204ENST00000464308 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.4
POLR2M-204ENST00000464308 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
POLR2M-204ENST00000464308 FBLN2P98095 1184 aa30■■■□□ 2.39
POLR2M-204ENST00000464308 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.39
POLR2M-204ENST00000464308 ARAP1Q96P48 1450 aa29.93■■■□□ 2.38
POLR2M-204ENST00000464308 TRHP20396 242 aaPredicted RBP29.91■■■□□ 2.38
POLR2M-204ENST00000464308 RAD54L2Q9Y4B4 1467 aa29.87■■■□□ 2.37
POLR2M-204ENST00000464308 SOGA1O94964 1423 aa29.82■■■□□ 2.36
POLR2M-204ENST00000464308 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
POLR2M-204ENST00000464308 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
POLR2M-204ENST00000464308 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
POLR2M-204ENST00000464308 WDR97A6NE52 1622 aa29.68■■■□□ 2.34
POLR2M-204ENST00000464308 CLASP1Q7Z460 1538 aa29.68■■■□□ 2.34
POLR2M-204ENST00000464308 CHMP7Q8WUX9 453 aaPredicted RBP29.67■■■□□ 2.34
POLR2M-204ENST00000464308 SYNJ1O43426 1573 aa29.65■■■□□ 2.34
POLR2M-204ENST00000464308 MAGI1Q96QZ7 1491 aaPredicted RBP29.62■■■□□ 2.33
POLR2M-204ENST00000464308 CUX1P39880 1505 aa29.62■■■□□ 2.33
POLR2M-204ENST00000464308 GRIN2BQ13224 1484 aa29.59■■■□□ 2.33
POLR2M-204ENST00000464308 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
POLR2M-204ENST00000464308 PBRM1Q86U86 1689 aa29.51■■■□□ 2.31
POLR2M-204ENST00000464308 GAPVD1Q14C86 1478 aa29.44■■■□□ 2.3
POLR2M-204ENST00000464308 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
POLR2M-204ENST00000464308 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
POLR2M-204ENST00000464308 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
POLR2M-204ENST00000464308 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
POLR2M-204ENST00000464308 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
POLR2M-204ENST00000464308 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
POLR2M-204ENST00000464308 CEP170Q5SW79 1584 aa29.15■■■□□ 2.26
POLR2M-204ENST00000464308 WRNQ14191 1432 aaPredicted RBP eCLIP29.14■■■□□ 2.26
POLR2M-204ENST00000464308 SUPT5HO00267 1087 aaKnown RBP29.11■■■□□ 2.25
POLR2M-204ENST00000464308 NUP160Q12769 1436 aa29.11■■■□□ 2.25
POLR2M-204ENST00000464308 SHROOM2Q13796 1616 aa29.05■■■□□ 2.24
POLR2M-204ENST00000464308 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
POLR2M-204ENST00000464308 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
POLR2M-204ENST00000464308 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
POLR2M-204ENST00000464308 ERICH3Q5RHP9 1530 aa28.95■■■□□ 2.23
POLR2M-204ENST00000464308 KIF13AQ9H1H9 1805 aa28.95■■■□□ 2.23
POLR2M-204ENST00000464308 PRG4Q92954 1404 aaPredicted RBP28.9■■■□□ 2.22
POLR2M-204ENST00000464308 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms