RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
HMG20B-208ENST00000464304 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
HMG20B-208ENST00000464304 ABCC9O60706 1549 aa39.51■■■■□ 3.92
HMG20B-208ENST00000464304 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
HMG20B-208ENST00000464304 DNAJC5BQ9UF47 199 aa37.65■■■■□ 3.62
HMG20B-208ENST00000464304 NACADO15069 1562 aa37.62■■■■□ 3.61
HMG20B-208ENST00000464304 RB1CC1Q8TDY2 1594 aa37.62■■■■□ 3.61
HMG20B-208ENST00000464304 DCAF8L2P0C7V8 631 aa37.59■■■■□ 3.61
HMG20B-208ENST00000464304 MYO15BQ96JP2 1530 aa37.44■■■■□ 3.58
HMG20B-208ENST00000464304 DCAF1Q9Y4B6 1507 aa37.4■■■■□ 3.58
HMG20B-208ENST00000464304 UNC13AQ9UPW8 1703 aa36.96■■■■□ 3.51
HMG20B-208ENST00000464304 PABPN1Q86U42 306 aaKnown RBP eCLIP36.68■■■■□ 3.461e-8■■■□□ 17.2
HMG20B-208ENST00000464304 SCRIBQ14160 1630 aa36.67■■■■□ 3.46
HMG20B-208ENST00000464304 BICRAQ9NZM4 1560 aa36.52■■■■□ 3.44
HMG20B-208ENST00000464304 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
HMG20B-208ENST00000464304 CC2D2AQ9P2K1 1620 aa35.66■■■■□ 3.3
HMG20B-208ENST00000464304 CECR2Q9BXF3 1484 aa35.56■■■■□ 3.28
HMG20B-208ENST00000464304 EIF4G1Q04637 1599 aaKnown RBP35.51■■■■□ 3.27
HMG20B-208ENST00000464304 SMARCA4P51532 1647 aa35.08■■■■□ 3.21
HMG20B-208ENST00000464304 BAZ1AQ9NRL2 1556 aaPredicted RBP35.03■■■■□ 3.2
HMG20B-208ENST00000464304 MROH2BQ7Z745 1585 aa34.87■■■■□ 3.17
HMG20B-208ENST00000464304 DNAJC5Q9H3Z4 198 aa34.8■■■■□ 3.16
HMG20B-208ENST00000464304 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.15
HMG20B-208ENST00000464304 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
HMG20B-208ENST00000464304 PEG3Q9GZU2 1588 aa34.7■■■■□ 3.14
HMG20B-208ENST00000464304 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
HMG20B-208ENST00000464304 HMGXB3Q12766 1538 aa34.58■■■■□ 3.13
HMG20B-208ENST00000464304 WIZO95785 1651 aa34.57■■■■□ 3.13
HMG20B-208ENST00000464304 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.12
HMG20B-208ENST00000464304 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
HMG20B-208ENST00000464304 TOP2AP11388 1531 aaKnown RBP34.16■■■■□ 3.06
HMG20B-208ENST00000464304 CUX2O14529 1486 aa34.12■■■■□ 3.05
HMG20B-208ENST00000464304 ERCC6Q03468 1493 aa34.02■■■■□ 3.04
HMG20B-208ENST00000464304 NESP48681 1621 aa33.85■■■■□ 3.01
HMG20B-208ENST00000464304 SUPT5HO00267 1087 aaKnown RBP33.81■■■■□ 3
HMG20B-208ENST00000464304 LAMC3Q9Y6N6 1575 aa33.77■■■■□ 3
HMG20B-208ENST00000464304 CCDC88BA6NC98 1476 aa33.72■■■□□ 2.99
HMG20B-208ENST00000464304 CADPSQ9ULU8 1353 aa33.66■■■□□ 2.98
HMG20B-208ENST00000464304 THOC2Q8NI27 1593 aaKnown RBP33.59■■■□□ 2.97
HMG20B-208ENST00000464304 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
HMG20B-208ENST00000464304 CFTRP13569 1480 aa33.54■■■□□ 2.96
HMG20B-208ENST00000464304 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
HMG20B-208ENST00000464304 PDS5BQ9NTI5 1447 aa33.45■■■□□ 2.95
HMG20B-208ENST00000464304 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
HMG20B-208ENST00000464304 CEP164Q9UPV0 1460 aa33.25■■■□□ 2.91
HMG20B-208ENST00000464304 MRC2Q9UBG0 1479 aa33.16■■■□□ 2.9
HMG20B-208ENST00000464304 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
HMG20B-208ENST00000464304 WDR62O43379 1518 aa33.07■■■□□ 2.88
HMG20B-208ENST00000464304 URB2Q14146 1524 aaKnown RBP33■■■□□ 2.87
HMG20B-208ENST00000464304 DNMBPQ6XZF7 1577 aa32.84■■■□□ 2.85
HMG20B-208ENST00000464304 TOPBP1Q92547 1522 aa32.84■■■□□ 2.85
HMG20B-208ENST00000464304 ABCC8Q09428 1581 aa32.79■■■□□ 2.84
HMG20B-208ENST00000464304 CUX1P39880 1505 aa32.71■■■□□ 2.83
HMG20B-208ENST00000464304 POLA1P09884 1462 aaPredicted RBP32.57■■■□□ 2.8
HMG20B-208ENST00000464304 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
HMG20B-208ENST00000464304 WRNQ14191 1432 aaPredicted RBP eCLIP32.54■■■□□ 2.8
HMG20B-208ENST00000464304 BIVM-ERCC5R4GMW8 1640 aa32.54■■■□□ 2.8
HMG20B-208ENST00000464304 IFT140Q96RY7 1462 aa32.53■■■□□ 2.8
HMG20B-208ENST00000464304 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
HMG20B-208ENST00000464304 TOP2BQ02880 1626 aa32.5■■■□□ 2.79
HMG20B-208ENST00000464304 TARBP1Q13395 1621 aaKnown RBP32.5■■■□□ 2.79
HMG20B-208ENST00000464304 RAD54L2Q9Y4B4 1467 aa32.43■■■□□ 2.78
HMG20B-208ENST00000464304 OSCARQ8IYS5 282 aa32.42■■■□□ 2.78
HMG20B-208ENST00000464304 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
HMG20B-208ENST00000464304 SOGA1O94964 1423 aa32.39■■■□□ 2.78
HMG20B-208ENST00000464304 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
HMG20B-208ENST00000464304 EIF4G3O43432 1585 aaKnown RBP32.34■■■□□ 2.77
HMG20B-208ENST00000464304 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
HMG20B-208ENST00000464304 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
HMG20B-208ENST00000464304 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
HMG20B-208ENST00000464304 AQRO60306 1485 aaKnown RBP eCLIP32.22■■■□□ 2.756e-11■■■■■ 32.2
HMG20B-208ENST00000464304 ABCA10Q8WWZ4 1543 aa32.21■■■□□ 2.75
HMG20B-208ENST00000464304 TDRD9Q8NDG6 1382 aaKnown RBP32.19■■■□□ 2.74
HMG20B-208ENST00000464304 ABCA5Q8WWZ7 1642 aa32.14■■■□□ 2.74
HMG20B-208ENST00000464304 PBRM1Q86U86 1689 aa32.11■■■□□ 2.73
HMG20B-208ENST00000464304 ARHGEF11O15085 1522 aa32.07■■■□□ 2.72
HMG20B-208ENST00000464304 GAPVD1Q14C86 1478 aa32.05■■■□□ 2.72
HMG20B-208ENST00000464304 GRIN2BQ13224 1484 aa32■■■□□ 2.71
HMG20B-208ENST00000464304 CHD1O14646 1710 aa31.96■■■□□ 2.71
HMG20B-208ENST00000464304 SNAPC4Q5SXM2 1469 aa31.96■■■□□ 2.71
HMG20B-208ENST00000464304 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
HMG20B-208ENST00000464304 ERICH3Q5RHP9 1530 aa31.84■■■□□ 2.69
HMG20B-208ENST00000464304 KIF27Q86VH2 1401 aa31.82■■■□□ 2.68
HMG20B-208ENST00000464304 ADAMTS12P58397 1594 aa31.81■■■□□ 2.68
HMG20B-208ENST00000464304 CYB5RLQ6IPT4 315 aa31.8■■■□□ 2.68
HMG20B-208ENST00000464304 SYNJ2O15056 1496 aa31.77■■■□□ 2.68
HMG20B-208ENST00000464304 ARAP1Q96P48 1450 aa31.76■■■□□ 2.67
HMG20B-208ENST00000464304 FBLN2P98095 1184 aa31.74■■■□□ 2.67
HMG20B-208ENST00000464304 CHIC1Q5VXU3 224 aa31.7■■■□□ 2.67
HMG20B-208ENST00000464304 RUSC2Q8N2Y8 1516 aa31.69■■■□□ 2.66
HMG20B-208ENST00000464304 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
HMG20B-208ENST00000464304 FHAD1B1AJZ9 1412 aa31.66■■■□□ 2.66
HMG20B-208ENST00000464304 CUL7Q14999 1698 aa31.66■■■□□ 2.66
HMG20B-208ENST00000464304 IGF1RP08069 1367 aa31.64■■■□□ 2.66
HMG20B-208ENST00000464304 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
HMG20B-208ENST00000464304 TRHP20396 242 aaPredicted RBP31.6■■■□□ 2.65
HMG20B-208ENST00000464304 CLASP1Q7Z460 1538 aa31.51■■■□□ 2.63
HMG20B-208ENST00000464304 CEP170Q5SW79 1584 aa31.5■■■□□ 2.63
HMG20B-208ENST00000464304 CARMIL1Q5VZK9 1371 aa31.47■■■□□ 2.63
HMG20B-208ENST00000464304 NUP160Q12769 1436 aa31.45■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms