RNA–Protein interactions for RNA: ENST00000464290.5

CRAT-208, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 867 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-208ENST00000464290 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
CRAT-208ENST00000464290 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
CRAT-208ENST00000464290 ABCC9O60706 1549 aa30.14■■■□□ 2.42
CRAT-208ENST00000464290 ZCCHC6Q5VYS8 1495 aaKnown RBP29.9■■■□□ 2.38
CRAT-208ENST00000464290 DCAF8L2P0C7V8 631 aa29.64■■■□□ 2.34
CRAT-208ENST00000464290 DCAF1Q9Y4B6 1507 aa29.55■■■□□ 2.32
CRAT-208ENST00000464290 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
CRAT-208ENST00000464290 NACADO15069 1562 aa29.36■■■□□ 2.29
CRAT-208ENST00000464290 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
CRAT-208ENST00000464290 SCRIBQ14160 1630 aa28.76■■■□□ 2.2
CRAT-208ENST00000464290 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
CRAT-208ENST00000464290 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
CRAT-208ENST00000464290 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
CRAT-208ENST00000464290 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
CRAT-208ENST00000464290 CECR2Q9BXF3 1484 aa27.81■■■□□ 2.04
CRAT-208ENST00000464290 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
CRAT-208ENST00000464290 MROH2BQ7Z745 1585 aa27.58■■■□□ 2.01
CRAT-208ENST00000464290 SMARCA4P51532 1647 aa27.56■■■□□ 2
CRAT-208ENST00000464290 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
CRAT-208ENST00000464290 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
CRAT-208ENST00000464290 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
CRAT-208ENST00000464290 WIZO95785 1651 aa27.3■■□□□ 1.96
CRAT-208ENST00000464290 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
CRAT-208ENST00000464290 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.95
CRAT-208ENST00000464290 PEG3Q9GZU2 1588 aa27.26■■□□□ 1.95
CRAT-208ENST00000464290 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
CRAT-208ENST00000464290 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
CRAT-208ENST00000464290 DNAJC5BQ9UF47 199 aa27.12■■□□□ 1.93
CRAT-208ENST00000464290 BAZ1BQ9UIG0 1483 aaKnown RBP27.05■■□□□ 1.92
CRAT-208ENST00000464290 TOP2AP11388 1531 aaKnown RBP27.01■■□□□ 1.91
CRAT-208ENST00000464290 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
CRAT-208ENST00000464290 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
CRAT-208ENST00000464290 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.82
CRAT-208ENST00000464290 CFTRP13569 1480 aa26.36■■□□□ 1.81
CRAT-208ENST00000464290 NESP48681 1621 aa26.31■■□□□ 1.8
CRAT-208ENST00000464290 LAMC3Q9Y6N6 1575 aa26.25■■□□□ 1.79
CRAT-208ENST00000464290 PRDM2Q13029 1718 aa26.14■■□□□ 1.78
CRAT-208ENST00000464290 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
CRAT-208ENST00000464290 FANCD2Q9BXW9 1451 aa26.07■■□□□ 1.76
CRAT-208ENST00000464290 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
CRAT-208ENST00000464290 ABCC8Q09428 1581 aa25.99■■□□□ 1.75
CRAT-208ENST00000464290 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
CRAT-208ENST00000464290 CEP164Q9UPV0 1460 aa25.94■■□□□ 1.74
CRAT-208ENST00000464290 WRNQ14191 1432 aaPredicted RBP eCLIP25.89■■□□□ 1.74
CRAT-208ENST00000464290 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
CRAT-208ENST00000464290 CUX1P39880 1505 aa25.83■■□□□ 1.72
CRAT-208ENST00000464290 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
CRAT-208ENST00000464290 SYNJ1O43426 1573 aa25.81■■□□□ 1.72
CRAT-208ENST00000464290 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
CRAT-208ENST00000464290 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
CRAT-208ENST00000464290 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
CRAT-208ENST00000464290 DNMBPQ6XZF7 1577 aa25.74■■□□□ 1.71
CRAT-208ENST00000464290 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
CRAT-208ENST00000464290 BIVM-ERCC5R4GMW8 1640 aa25.72■■□□□ 1.71
CRAT-208ENST00000464290 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
CRAT-208ENST00000464290 WDR62O43379 1518 aa25.66■■□□□ 1.7
CRAT-208ENST00000464290 FGD5Q6ZNL6 1462 aa25.6■■□□□ 1.69
CRAT-208ENST00000464290 POLA1P09884 1462 aaPredicted RBP25.57■■□□□ 1.68
CRAT-208ENST00000464290 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
CRAT-208ENST00000464290 SOGA1O94964 1423 aa25.49■■□□□ 1.67
CRAT-208ENST00000464290 CUX2O14529 1486 aa25.48■■□□□ 1.67
CRAT-208ENST00000464290 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
CRAT-208ENST00000464290 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
CRAT-208ENST00000464290 IFT140Q96RY7 1462 aa25.38■■□□□ 1.65
CRAT-208ENST00000464290 RUSC2Q8N2Y8 1516 aa25.37■■□□□ 1.65
CRAT-208ENST00000464290 WDR97A6NE52 1622 aa25.33■■□□□ 1.65
CRAT-208ENST00000464290 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
CRAT-208ENST00000464290 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
CRAT-208ENST00000464290 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
CRAT-208ENST00000464290 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
CRAT-208ENST00000464290 EEA1Q15075 1411 aa25.25■■□□□ 1.63
CRAT-208ENST00000464290 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.63
CRAT-208ENST00000464290 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
CRAT-208ENST00000464290 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
CRAT-208ENST00000464290 CSRNP3Q8WYN3 585 aa25.19■■□□□ 1.62
CRAT-208ENST00000464290 IGF1RP08069 1367 aa25.17■■□□□ 1.62
CRAT-208ENST00000464290 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
CRAT-208ENST00000464290 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
CRAT-208ENST00000464290 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
CRAT-208ENST00000464290 PBRM1Q86U86 1689 aa25.05■■□□□ 1.6
CRAT-208ENST00000464290 PRXQ9BXM0 1461 aa25.02■■□□□ 1.6
CRAT-208ENST00000464290 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
CRAT-208ENST00000464290 LOC105371045A0A1W2PR82 267 aa24.97■■□□□ 1.59
CRAT-208ENST00000464290 SNAPC4Q5SXM2 1469 aa24.96■■□□□ 1.59
CRAT-208ENST00000464290 EHMT2Q96KQ7 1210 aa24.95■■□□□ 1.58
CRAT-208ENST00000464290 CUL7Q14999 1698 aa24.94■■□□□ 1.58
CRAT-208ENST00000464290 KIF21BO75037 1637 aa24.94■■□□□ 1.58
CRAT-208ENST00000464290 MAGI1Q96QZ7 1491 aaPredicted RBP24.92■■□□□ 1.58
CRAT-208ENST00000464290 FHAD1B1AJZ9 1412 aa24.92■■□□□ 1.58
CRAT-208ENST00000464290 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
CRAT-208ENST00000464290 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
CRAT-208ENST00000464290 GOLGA3Q08378 1498 aa24.87■■□□□ 1.57
CRAT-208ENST00000464290 SYNJ2O15056 1496 aa24.83■■□□□ 1.56
CRAT-208ENST00000464290 CHMP7Q8WUX9 453 aaPredicted RBP24.8■■□□□ 1.56
CRAT-208ENST00000464290 UBTFP17480 764 aaKnown RBP24.79■■□□□ 1.56
CRAT-208ENST00000464290 FBLN2P98095 1184 aa24.77■■□□□ 1.56
CRAT-208ENST00000464290 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
CRAT-208ENST00000464290 TNIKQ9UKE5 1360 aa24.72■■□□□ 1.55
CRAT-208ENST00000464290 CHD1O14646 1710 aa24.68■■□□□ 1.54
CRAT-208ENST00000464290 NUP160Q12769 1436 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms