RNA–Protein interactions for RNA: ENST00000464271.1

LINC00877-202, long intergenic non-protein coding RNA 877, humanhuman

TSL 4 BASIC

Gene LINC00877, Length 552 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00877-202ENST00000464271 NISCHQ9Y2I1 1504 aa29.89■■■□□ 2.38
LINC00877-202ENST00000464271 CCDC180Q9P1Z9 1646 aa26.69■■□□□ 1.86
LINC00877-202ENST00000464271 ABCC9O60706 1549 aa26.12■■□□□ 1.77
LINC00877-202ENST00000464271 RB1CC1Q8TDY2 1594 aa25.14■■□□□ 1.62
LINC00877-202ENST00000464271 NACADO15069 1562 aa25.06■■□□□ 1.6
LINC00877-202ENST00000464271 DCAF8L2P0C7V8 631 aa25.06■■□□□ 1.6
LINC00877-202ENST00000464271 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
LINC00877-202ENST00000464271 MYO15BQ96JP2 1530 aa24.85■■□□□ 1.57
LINC00877-202ENST00000464271 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
LINC00877-202ENST00000464271 UNC13AQ9UPW8 1703 aa24.6■■□□□ 1.53
LINC00877-202ENST00000464271 PABPN1Q86U42 306 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC00877-202ENST00000464271 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
LINC00877-202ENST00000464271 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
LINC00877-202ENST00000464271 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
LINC00877-202ENST00000464271 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
LINC00877-202ENST00000464271 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
LINC00877-202ENST00000464271 CC2D2AQ9P2K1 1620 aa23.64■■□□□ 1.38
LINC00877-202ENST00000464271 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
LINC00877-202ENST00000464271 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
LINC00877-202ENST00000464271 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
LINC00877-202ENST00000464271 SMARCA2P51531 1590 aa23.13■■□□□ 1.29
LINC00877-202ENST00000464271 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
LINC00877-202ENST00000464271 NCAPD3P42695 1498 aa23.06■■□□□ 1.28
LINC00877-202ENST00000464271 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
LINC00877-202ENST00000464271 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
LINC00877-202ENST00000464271 PEG3Q9GZU2 1588 aa22.98■■□□□ 1.27
LINC00877-202ENST00000464271 BAZ1BQ9UIG0 1483 aaKnown RBP22.96■■□□□ 1.27
LINC00877-202ENST00000464271 WIZO95785 1651 aa22.83■■□□□ 1.24
LINC00877-202ENST00000464271 RSF1Q96T23 1441 aaPredicted RBP22.72■■□□□ 1.23
LINC00877-202ENST00000464271 ERCC6Q03468 1493 aa22.58■■□□□ 1.2
LINC00877-202ENST00000464271 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
LINC00877-202ENST00000464271 NESP48681 1621 aa22.56■■□□□ 1.2
LINC00877-202ENST00000464271 LAMC3Q9Y6N6 1575 aa22.55■■□□□ 1.2
LINC00877-202ENST00000464271 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
LINC00877-202ENST00000464271 KIF21AQ7Z4S6 1674 aa22.38■■□□□ 1.17
LINC00877-202ENST00000464271 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
LINC00877-202ENST00000464271 CUX2O14529 1486 aa22.31■■□□□ 1.16
LINC00877-202ENST00000464271 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.16
LINC00877-202ENST00000464271 THOC2Q8NI27 1593 aaKnown RBP22.26■■□□□ 1.15
LINC00877-202ENST00000464271 CFTRP13569 1480 aa22.26■■□□□ 1.15
LINC00877-202ENST00000464271 PRDM2Q13029 1718 aa22.25■■□□□ 1.15
LINC00877-202ENST00000464271 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
LINC00877-202ENST00000464271 FANCD2Q9BXW9 1451 aa22.19■■□□□ 1.14
LINC00877-202ENST00000464271 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
LINC00877-202ENST00000464271 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
LINC00877-202ENST00000464271 WDR62O43379 1518 aa22.07■■□□□ 1.12
LINC00877-202ENST00000464271 URB2Q14146 1524 aaKnown RBP21.94■■□□□ 1.1
LINC00877-202ENST00000464271 ABCC8Q09428 1581 aa21.85■■□□□ 1.09
LINC00877-202ENST00000464271 TOPBP1Q92547 1522 aa21.82■■□□□ 1.08
LINC00877-202ENST00000464271 DNMBPQ6XZF7 1577 aa21.82■■□□□ 1.08
LINC00877-202ENST00000464271 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
LINC00877-202ENST00000464271 DNAJC5Q9H3Z4 198 aa21.63■■□□□ 1.05
LINC00877-202ENST00000464271 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
LINC00877-202ENST00000464271 CUX1P39880 1505 aa21.61■■□□□ 1.05
LINC00877-202ENST00000464271 TARBP1Q13395 1621 aaKnown RBP21.58■■□□□ 1.05
LINC00877-202ENST00000464271 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.04
LINC00877-202ENST00000464271 FGD5Q6ZNL6 1462 aa21.58■■□□□ 1.04
LINC00877-202ENST00000464271 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
LINC00877-202ENST00000464271 SOGA1O94964 1423 aa21.54■■□□□ 1.04
LINC00877-202ENST00000464271 RAD54L2Q9Y4B4 1467 aa21.52■■□□□ 1.03
LINC00877-202ENST00000464271 WRNQ14191 1432 aaPredicted RBP eCLIP21.48■■□□□ 1.03
LINC00877-202ENST00000464271 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
LINC00877-202ENST00000464271 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.03
LINC00877-202ENST00000464271 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
LINC00877-202ENST00000464271 TOP2BQ02880 1626 aa21.45■■□□□ 1.02
LINC00877-202ENST00000464271 SYNJ1O43426 1573 aa21.43■■□□□ 1.02
LINC00877-202ENST00000464271 TDRD9Q8NDG6 1382 aaKnown RBP21.4■■□□□ 1.02
LINC00877-202ENST00000464271 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
LINC00877-202ENST00000464271 CHD1O14646 1710 aa21.35■■□□□ 1.01
LINC00877-202ENST00000464271 ABCA10Q8WWZ4 1543 aa21.34■■□□□ 1.01
LINC00877-202ENST00000464271 PBRM1Q86U86 1689 aa21.34■■□□□ 1.01
LINC00877-202ENST00000464271 GRIN2BQ13224 1484 aa21.31■■□□□ 1
LINC00877-202ENST00000464271 ABCA5Q8WWZ7 1642 aa21.3■■□□□ 1
LINC00877-202ENST00000464271 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
LINC00877-202ENST00000464271 SNAPC4Q5SXM2 1469 aa21.28■■□□□ 1
LINC00877-202ENST00000464271 FBLN2P98095 1184 aa21.28■■□□□ 1
LINC00877-202ENST00000464271 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
LINC00877-202ENST00000464271 CHMP7Q8WUX9 453 aaPredicted RBP21.19■□□□□ 0.98
LINC00877-202ENST00000464271 SYNJ2O15056 1496 aa21.18■□□□□ 0.98
LINC00877-202ENST00000464271 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
LINC00877-202ENST00000464271 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
LINC00877-202ENST00000464271 RIMBP3CA6NJZ7 1639 aa21.06■□□□□ 0.96
LINC00877-202ENST00000464271 RIMBP3BA6NNM3 1639 aa21.06■□□□□ 0.96
LINC00877-202ENST00000464271 RIMBP3Q9UFD9 1639 aa21.06■□□□□ 0.96
LINC00877-202ENST00000464271 FHAD1B1AJZ9 1412 aa21.04■□□□□ 0.96
LINC00877-202ENST00000464271 KIF27Q86VH2 1401 aa21.04■□□□□ 0.96
LINC00877-202ENST00000464271 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
LINC00877-202ENST00000464271 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
LINC00877-202ENST00000464271 CLASP1Q7Z460 1538 aa21.03■□□□□ 0.96
LINC00877-202ENST00000464271 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
LINC00877-202ENST00000464271 CUL7Q14999 1698 aa20.97■□□□□ 0.95
LINC00877-202ENST00000464271 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
LINC00877-202ENST00000464271 NUP160Q12769 1436 aa20.9■□□□□ 0.94
LINC00877-202ENST00000464271 IGF1RP08069 1367 aa20.89■□□□□ 0.93
LINC00877-202ENST00000464271 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
LINC00877-202ENST00000464271 CYB5RLQ6IPT4 315 aa20.82■□□□□ 0.92
LINC00877-202ENST00000464271 CARMIL1Q5VZK9 1371 aa20.81■□□□□ 0.92
LINC00877-202ENST00000464271 RUSC2Q8N2Y8 1516 aa20.8■□□□□ 0.92
LINC00877-202ENST00000464271 SHROOM2Q13796 1616 aa20.8■□□□□ 0.92
LINC00877-202ENST00000464271 KIAA0586Q9BVV6 1533 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms