RNA–Protein interactions for RNA: ENST00000464239.5

SH2D3C-208, Transcript of SH2 domain containing 3C, humanhuman

TSL 5

Gene SH2D3C, Length 888 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-208ENST00000464239 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
SH2D3C-208ENST00000464239 ABCC9O60706 1549 aa28.86■■■□□ 2.21
SH2D3C-208ENST00000464239 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.19
SH2D3C-208ENST00000464239 RB1CC1Q8TDY2 1594 aa27.38■■□□□ 1.97
SH2D3C-208ENST00000464239 NACADO15069 1562 aa27.22■■□□□ 1.95
SH2D3C-208ENST00000464239 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
SH2D3C-208ENST00000464239 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
SH2D3C-208ENST00000464239 PABPN1Q86U42 306 aaKnown RBP eCLIP26.95■■□□□ 1.9
SH2D3C-208ENST00000464239 MYO15BQ96JP2 1530 aa26.87■■□□□ 1.89
SH2D3C-208ENST00000464239 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.88
SH2D3C-208ENST00000464239 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
SH2D3C-208ENST00000464239 BICRAQ9NZM4 1560 aa26.69■■□□□ 1.86
SH2D3C-208ENST00000464239 DCAF1Q9Y4B6 1507 aa26.56■■□□□ 1.84
SH2D3C-208ENST00000464239 SCRIBQ14160 1630 aa26.31■■□□□ 1.8
SH2D3C-208ENST00000464239 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
SH2D3C-208ENST00000464239 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
SH2D3C-208ENST00000464239 EIF4G1Q04637 1599 aaKnown RBP25.98■■□□□ 1.75
SH2D3C-208ENST00000464239 CECR2Q9BXF3 1484 aa25.97■■□□□ 1.75
SH2D3C-208ENST00000464239 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
SH2D3C-208ENST00000464239 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
SH2D3C-208ENST00000464239 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
SH2D3C-208ENST00000464239 SMARCA2P51531 1590 aa24.99■■□□□ 1.59
SH2D3C-208ENST00000464239 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
SH2D3C-208ENST00000464239 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
SH2D3C-208ENST00000464239 MROH2BQ7Z745 1585 aa24.87■■□□□ 1.57
SH2D3C-208ENST00000464239 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
SH2D3C-208ENST00000464239 NESP48681 1621 aa24.84■■□□□ 1.57
SH2D3C-208ENST00000464239 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
SH2D3C-208ENST00000464239 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
SH2D3C-208ENST00000464239 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
SH2D3C-208ENST00000464239 CUX2O14529 1486 aa24.77■■□□□ 1.56
SH2D3C-208ENST00000464239 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
SH2D3C-208ENST00000464239 WIZO95785 1651 aa24.53■■□□□ 1.52
SH2D3C-208ENST00000464239 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
SH2D3C-208ENST00000464239 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
SH2D3C-208ENST00000464239 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
SH2D3C-208ENST00000464239 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
SH2D3C-208ENST00000464239 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
SH2D3C-208ENST00000464239 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
SH2D3C-208ENST00000464239 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
SH2D3C-208ENST00000464239 CFTRP13569 1480 aa24.18■■□□□ 1.46
SH2D3C-208ENST00000464239 WDR62O43379 1518 aa24.17■■□□□ 1.46
SH2D3C-208ENST00000464239 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
SH2D3C-208ENST00000464239 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
SH2D3C-208ENST00000464239 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
SH2D3C-208ENST00000464239 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
SH2D3C-208ENST00000464239 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
SH2D3C-208ENST00000464239 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
SH2D3C-208ENST00000464239 TOPBP1Q92547 1522 aa23.71■■□□□ 1.39
SH2D3C-208ENST00000464239 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
SH2D3C-208ENST00000464239 OSCARQ8IYS5 282 aa23.7■■□□□ 1.38
SH2D3C-208ENST00000464239 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
SH2D3C-208ENST00000464239 DNMBPQ6XZF7 1577 aa23.57■■□□□ 1.36
SH2D3C-208ENST00000464239 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
SH2D3C-208ENST00000464239 AQRO60306 1485 aaKnown RBP eCLIP23.5■■□□□ 1.35
SH2D3C-208ENST00000464239 POLA1P09884 1462 aaPredicted RBP23.48■■□□□ 1.35
SH2D3C-208ENST00000464239 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
SH2D3C-208ENST00000464239 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
SH2D3C-208ENST00000464239 RAD54L2Q9Y4B4 1467 aa23.43■■□□□ 1.34
SH2D3C-208ENST00000464239 SOGA1O94964 1423 aa23.37■■□□□ 1.33
SH2D3C-208ENST00000464239 SUPT5HO00267 1087 aaKnown RBP23.37■■□□□ 1.33
SH2D3C-208ENST00000464239 TDRD9Q8NDG6 1382 aaKnown RBP23.37■■□□□ 1.33
SH2D3C-208ENST00000464239 CUX1P39880 1505 aa23.35■■□□□ 1.33
SH2D3C-208ENST00000464239 RIMBP3CA6NJZ7 1639 aa23.35■■□□□ 1.33
SH2D3C-208ENST00000464239 RIMBP3BA6NNM3 1639 aa23.35■■□□□ 1.33
SH2D3C-208ENST00000464239 RIMBP3Q9UFD9 1639 aa23.35■■□□□ 1.33
SH2D3C-208ENST00000464239 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.33
SH2D3C-208ENST00000464239 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
SH2D3C-208ENST00000464239 FBLN2P98095 1184 aa23.3■■□□□ 1.32
SH2D3C-208ENST00000464239 CHD1O14646 1710 aa23.26■■□□□ 1.31
SH2D3C-208ENST00000464239 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
SH2D3C-208ENST00000464239 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
SH2D3C-208ENST00000464239 GRIN2BQ13224 1484 aa23.13■■□□□ 1.29
SH2D3C-208ENST00000464239 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
SH2D3C-208ENST00000464239 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
SH2D3C-208ENST00000464239 CHMP7Q8WUX9 453 aaPredicted RBP23.11■■□□□ 1.29
SH2D3C-208ENST00000464239 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
SH2D3C-208ENST00000464239 GAPVD1Q14C86 1478 aa23.07■■□□□ 1.28
SH2D3C-208ENST00000464239 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
SH2D3C-208ENST00000464239 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
SH2D3C-208ENST00000464239 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
SH2D3C-208ENST00000464239 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
SH2D3C-208ENST00000464239 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
SH2D3C-208ENST00000464239 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
SH2D3C-208ENST00000464239 PBRM1Q86U86 1689 aa22.97■■□□□ 1.27
SH2D3C-208ENST00000464239 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
SH2D3C-208ENST00000464239 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
SH2D3C-208ENST00000464239 TRHP20396 242 aaPredicted RBP22.85■■□□□ 1.25
SH2D3C-208ENST00000464239 GRIN2AQ12879 1464 aa22.84■■□□□ 1.25
SH2D3C-208ENST00000464239 ADAMTS12P58397 1594 aa22.81■■□□□ 1.24
SH2D3C-208ENST00000464239 NUP160Q12769 1436 aa22.79■■□□□ 1.24
SH2D3C-208ENST00000464239 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
SH2D3C-208ENST00000464239 CEP170Q5SW79 1584 aa22.77■■□□□ 1.24
SH2D3C-208ENST00000464239 FHAD1B1AJZ9 1412 aa22.77■■□□□ 1.24
SH2D3C-208ENST00000464239 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
SH2D3C-208ENST00000464239 SHROOM2Q13796 1616 aa22.63■■□□□ 1.21
SH2D3C-208ENST00000464239 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
SH2D3C-208ENST00000464239 IGF1RP08069 1367 aa22.57■■□□□ 1.2
SH2D3C-208ENST00000464239 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
SH2D3C-208ENST00000464239 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms