RNA–Protein interactions for RNA: ENST00000464221.1

DDX43-202, Transcript of DEAD-box helicase 43, humanhuman

TSL 4

Gene DDX43, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43-202ENST00000464221 NISCHQ9Y2I1 1504 aa41.93■■■■■ 4.3
DDX43-202ENST00000464221 CCDC180Q9P1Z9 1646 aa37.53■■■■□ 3.6
DDX43-202ENST00000464221 ABCC9O60706 1549 aa36.87■■■■□ 3.49
DDX43-202ENST00000464221 RB1CC1Q8TDY2 1594 aa35.36■■■■□ 3.25
DDX43-202ENST00000464221 NACADO15069 1562 aa35.22■■■■□ 3.23
DDX43-202ENST00000464221 DCAF8L2P0C7V8 631 aa35■■■■□ 3.19
DDX43-202ENST00000464221 ZCCHC6Q5VYS8 1495 aaKnown RBP34.9■■■■□ 3.18
DDX43-202ENST00000464221 MYO15BQ96JP2 1530 aa34.88■■■■□ 3.17
DDX43-202ENST00000464221 UNC13AQ9UPW8 1703 aa34.8■■■■□ 3.16
DDX43-202ENST00000464221 DCAF1Q9Y4B6 1507 aa34.65■■■■□ 3.14
DDX43-202ENST00000464221 BICRAQ9NZM4 1560 aa34.36■■■■□ 3.09
DDX43-202ENST00000464221 PABPN1Q86U42 306 aaKnown RBP eCLIP34.31■■■■□ 3.08
DDX43-202ENST00000464221 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
DDX43-202ENST00000464221 DNAJC5BQ9UF47 199 aa33.99■■■■□ 3.03
DDX43-202ENST00000464221 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
DDX43-202ENST00000464221 EIF4G1Q04637 1599 aaKnown RBP33.44■■■□□ 2.94
DDX43-202ENST00000464221 CC2D2AQ9P2K1 1620 aa33.39■■■□□ 2.94
DDX43-202ENST00000464221 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
DDX43-202ENST00000464221 SMARCA4P51532 1647 aa32.68■■■□□ 2.82
DDX43-202ENST00000464221 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
DDX43-202ENST00000464221 ATAD2BQ9ULI0 1458 aa32.46■■■□□ 2.79
DDX43-202ENST00000464221 SMARCA2P51531 1590 aa32.44■■■□□ 2.78
DDX43-202ENST00000464221 NCAPD3P42695 1498 aa32.43■■■□□ 2.78
DDX43-202ENST00000464221 HMGXB3Q12766 1538 aa32.36■■■□□ 2.77
DDX43-202ENST00000464221 MROH2BQ7Z745 1585 aa32.35■■■□□ 2.77
DDX43-202ENST00000464221 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
DDX43-202ENST00000464221 BAZ1BQ9UIG0 1483 aaKnown RBP32.21■■■□□ 2.75
DDX43-202ENST00000464221 WIZO95785 1651 aa32.07■■■□□ 2.72
DDX43-202ENST00000464221 NESP48681 1621 aa31.86■■■□□ 2.69
DDX43-202ENST00000464221 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
DDX43-202ENST00000464221 ERCC6Q03468 1493 aa31.77■■■□□ 2.68
DDX43-202ENST00000464221 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
DDX43-202ENST00000464221 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
DDX43-202ENST00000464221 KIF21AQ7Z4S6 1674 aa31.61■■■□□ 2.65
DDX43-202ENST00000464221 CUX2O14529 1486 aa31.52■■■□□ 2.64
DDX43-202ENST00000464221 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
DDX43-202ENST00000464221 CADPSQ9ULU8 1353 aa31.45■■■□□ 2.63
DDX43-202ENST00000464221 PDS5BQ9NTI5 1447 aa31.4■■■□□ 2.62
DDX43-202ENST00000464221 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
DDX43-202ENST00000464221 CFTRP13569 1480 aa31.27■■■□□ 2.6
DDX43-202ENST00000464221 CCDC88BA6NC98 1476 aa31.21■■■□□ 2.59
DDX43-202ENST00000464221 FANCD2Q9BXW9 1451 aa31.18■■■□□ 2.58
DDX43-202ENST00000464221 MRC2Q9UBG0 1479 aa31.18■■■□□ 2.58
DDX43-202ENST00000464221 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
DDX43-202ENST00000464221 WDR62O43379 1518 aa31.14■■■□□ 2.57
DDX43-202ENST00000464221 URB2Q14146 1524 aaKnown RBP30.93■■■□□ 2.54
DDX43-202ENST00000464221 DNAJC5Q9H3Z4 198 aa30.75■■■□□ 2.51
DDX43-202ENST00000464221 SUPT5HO00267 1087 aaKnown RBP30.74■■■□□ 2.51
DDX43-202ENST00000464221 TOPBP1Q92547 1522 aa30.68■■■□□ 2.5
DDX43-202ENST00000464221 DNMBPQ6XZF7 1577 aa30.65■■■□□ 2.5
DDX43-202ENST00000464221 ABCC8Q09428 1581 aa30.57■■■□□ 2.48
DDX43-202ENST00000464221 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
DDX43-202ENST00000464221 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
DDX43-202ENST00000464221 TARBP1Q13395 1621 aaKnown RBP30.43■■■□□ 2.46
DDX43-202ENST00000464221 EIF4G3O43432 1585 aaKnown RBP30.41■■■□□ 2.46
DDX43-202ENST00000464221 POLA1P09884 1462 aaPredicted RBP30.39■■■□□ 2.46
DDX43-202ENST00000464221 CUX1P39880 1505 aa30.37■■■□□ 2.45
DDX43-202ENST00000464221 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
DDX43-202ENST00000464221 RAD54L2Q9Y4B4 1467 aa30.25■■■□□ 2.43
DDX43-202ENST00000464221 WDR97A6NE52 1622 aa30.21■■■□□ 2.43
DDX43-202ENST00000464221 SOGA1O94964 1423 aa30.18■■■□□ 2.42
DDX43-202ENST00000464221 AQRO60306 1485 aaKnown RBP eCLIP30.18■■■□□ 2.42
DDX43-202ENST00000464221 CHD1O14646 1710 aa30.14■■■□□ 2.42
DDX43-202ENST00000464221 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
DDX43-202ENST00000464221 SYNJ1O43426 1573 aa30.07■■■□□ 2.4
DDX43-202ENST00000464221 TDRD9Q8NDG6 1382 aaKnown RBP30.06■■■□□ 2.4
DDX43-202ENST00000464221 TOP2BQ02880 1626 aa30.05■■■□□ 2.4
DDX43-202ENST00000464221 PBRM1Q86U86 1689 aa30.04■■■□□ 2.4
DDX43-202ENST00000464221 OSCARQ8IYS5 282 aa30.03■■■□□ 2.4
DDX43-202ENST00000464221 WRNQ14191 1432 aaPredicted RBP eCLIP30■■■□□ 2.39
DDX43-202ENST00000464221 ABCA5Q8WWZ7 1642 aa29.97■■■□□ 2.39
DDX43-202ENST00000464221 SNAPC4Q5SXM2 1469 aa29.95■■■□□ 2.39
DDX43-202ENST00000464221 ABCA10Q8WWZ4 1543 aa29.95■■■□□ 2.38
DDX43-202ENST00000464221 GRIN2BQ13224 1484 aa29.89■■■□□ 2.38
DDX43-202ENST00000464221 GAPVD1Q14C86 1478 aa29.87■■■□□ 2.37
DDX43-202ENST00000464221 MAGI1Q96QZ7 1491 aaPredicted RBP29.87■■■□□ 2.37
DDX43-202ENST00000464221 RIMBP3CA6NJZ7 1639 aa29.83■■■□□ 2.37
DDX43-202ENST00000464221 RIMBP3BA6NNM3 1639 aa29.83■■■□□ 2.37
DDX43-202ENST00000464221 RIMBP3Q9UFD9 1639 aa29.83■■■□□ 2.37
DDX43-202ENST00000464221 FBLN2P98095 1184 aa29.8■■■□□ 2.36
DDX43-202ENST00000464221 SYNJ2O15056 1496 aa29.74■■■□□ 2.35
DDX43-202ENST00000464221 ARHGEF11O15085 1522 aa29.73■■■□□ 2.35
DDX43-202ENST00000464221 ADAMTS12P58397 1594 aa29.7■■■□□ 2.35
DDX43-202ENST00000464221 CLASP1Q7Z460 1538 aa29.69■■■□□ 2.34
DDX43-202ENST00000464221 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
DDX43-202ENST00000464221 CHMP7Q8WUX9 453 aaPredicted RBP29.64■■■□□ 2.34
DDX43-202ENST00000464221 ERICH3Q5RHP9 1530 aa29.6■■■□□ 2.33
DDX43-202ENST00000464221 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
DDX43-202ENST00000464221 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
DDX43-202ENST00000464221 CEP170Q5SW79 1584 aa29.48■■■□□ 2.31
DDX43-202ENST00000464221 ARAP1Q96P48 1450 aa29.48■■■□□ 2.31
DDX43-202ENST00000464221 NUP160Q12769 1436 aa29.4■■■□□ 2.3
DDX43-202ENST00000464221 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
DDX43-202ENST00000464221 CUL7Q14999 1698 aa29.36■■■□□ 2.29
DDX43-202ENST00000464221 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
DDX43-202ENST00000464221 SHROOM2Q13796 1616 aa29.32■■■□□ 2.28
DDX43-202ENST00000464221 ERCC6L2Q5T890 1561 aa29.29■■■□□ 2.28
DDX43-202ENST00000464221 RUSC2Q8N2Y8 1516 aa29.29■■■□□ 2.28
DDX43-202ENST00000464221 IGF1RP08069 1367 aa29.25■■■□□ 2.27
DDX43-202ENST00000464221 CARMIL1Q5VZK9 1371 aa29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms