RNA–Protein interactions for RNA: ENST00000464050.5

COMMD6-207, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 790 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-207ENST00000464050 NISCHQ9Y2I1 1504 aa32.99■■■□□ 2.87
COMMD6-207ENST00000464050 CCDC180Q9P1Z9 1646 aa29.48■■■□□ 2.31
COMMD6-207ENST00000464050 ABCC9O60706 1549 aa29.13■■■□□ 2.25
COMMD6-207ENST00000464050 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
COMMD6-207ENST00000464050 DCAF8L2P0C7V8 631 aa27.85■■■□□ 2.05
COMMD6-207ENST00000464050 NACADO15069 1562 aa27.77■■■□□ 2.04
COMMD6-207ENST00000464050 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
COMMD6-207ENST00000464050 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
COMMD6-207ENST00000464050 DCAF1Q9Y4B6 1507 aa27.26■■□□□ 1.95
COMMD6-207ENST00000464050 UNC13AQ9UPW8 1703 aa27.2■■□□□ 1.94
COMMD6-207ENST00000464050 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
COMMD6-207ENST00000464050 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.9
COMMD6-207ENST00000464050 SCRIBQ14160 1630 aa26.93■■□□□ 1.9
COMMD6-207ENST00000464050 DNAJC5BQ9UF47 199 aa26.83■■□□□ 1.89
COMMD6-207ENST00000464050 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
COMMD6-207ENST00000464050 EIF4G1Q04637 1599 aaKnown RBP26.33■■□□□ 1.81
COMMD6-207ENST00000464050 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
COMMD6-207ENST00000464050 CECR2Q9BXF3 1484 aa26.2■■□□□ 1.78
COMMD6-207ENST00000464050 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
COMMD6-207ENST00000464050 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
COMMD6-207ENST00000464050 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
COMMD6-207ENST00000464050 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
COMMD6-207ENST00000464050 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
COMMD6-207ENST00000464050 HMGXB3Q12766 1538 aa25.47■■□□□ 1.67
COMMD6-207ENST00000464050 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
COMMD6-207ENST00000464050 MROH2BQ7Z745 1585 aa25.41■■□□□ 1.66
COMMD6-207ENST00000464050 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
COMMD6-207ENST00000464050 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
COMMD6-207ENST00000464050 WIZO95785 1651 aa25.15■■□□□ 1.62
COMMD6-207ENST00000464050 NESP48681 1621 aa25.08■■□□□ 1.6
COMMD6-207ENST00000464050 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
COMMD6-207ENST00000464050 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.59
COMMD6-207ENST00000464050 CUX2O14529 1486 aa24.95■■□□□ 1.58
COMMD6-207ENST00000464050 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
COMMD6-207ENST00000464050 TOP2AP11388 1531 aaKnown RBP24.89■■□□□ 1.57
COMMD6-207ENST00000464050 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
COMMD6-207ENST00000464050 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
COMMD6-207ENST00000464050 THOC2Q8NI27 1593 aaKnown RBP24.75■■□□□ 1.55
COMMD6-207ENST00000464050 CFTRP13569 1480 aa24.64■■□□□ 1.53
COMMD6-207ENST00000464050 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
COMMD6-207ENST00000464050 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
COMMD6-207ENST00000464050 FANCD2Q9BXW9 1451 aa24.61■■□□□ 1.53
COMMD6-207ENST00000464050 CCDC88BA6NC98 1476 aa24.57■■□□□ 1.52
COMMD6-207ENST00000464050 WDR62O43379 1518 aa24.51■■□□□ 1.51
COMMD6-207ENST00000464050 PRDM2Q13029 1718 aa24.49■■□□□ 1.51
COMMD6-207ENST00000464050 DNAJC5Q9H3Z4 198 aa24.44■■□□□ 1.5
COMMD6-207ENST00000464050 SUPT5HO00267 1087 aaKnown RBP24.35■■□□□ 1.49
COMMD6-207ENST00000464050 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
COMMD6-207ENST00000464050 ABCC8Q09428 1581 aa24.19■■□□□ 1.46
COMMD6-207ENST00000464050 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
COMMD6-207ENST00000464050 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
COMMD6-207ENST00000464050 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
COMMD6-207ENST00000464050 ZNF608Q9ULD9 1512 aaPredicted RBP23.97■■□□□ 1.43
COMMD6-207ENST00000464050 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
COMMD6-207ENST00000464050 EIF4G3O43432 1585 aaKnown RBP23.91■■□□□ 1.42
COMMD6-207ENST00000464050 OSCARQ8IYS5 282 aa23.9■■□□□ 1.42
COMMD6-207ENST00000464050 TARBP1Q13395 1621 aaKnown RBP23.88■■□□□ 1.41
COMMD6-207ENST00000464050 SOGA1O94964 1423 aa23.87■■□□□ 1.41
COMMD6-207ENST00000464050 CUX1P39880 1505 aa23.87■■□□□ 1.41
COMMD6-207ENST00000464050 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
COMMD6-207ENST00000464050 RAD54L2Q9Y4B4 1467 aa23.85■■□□□ 1.41
COMMD6-207ENST00000464050 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.41
COMMD6-207ENST00000464050 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
COMMD6-207ENST00000464050 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
COMMD6-207ENST00000464050 FBLN2P98095 1184 aa23.73■■□□□ 1.39
COMMD6-207ENST00000464050 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
COMMD6-207ENST00000464050 TRIM41Q8WV44 630 aa23.67■■□□□ 1.38
COMMD6-207ENST00000464050 CHD1O14646 1710 aa23.67■■□□□ 1.38
COMMD6-207ENST00000464050 GRIN2BQ13224 1484 aa23.63■■□□□ 1.37
COMMD6-207ENST00000464050 SNAPC4Q5SXM2 1469 aa23.63■■□□□ 1.37
COMMD6-207ENST00000464050 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
COMMD6-207ENST00000464050 ABCA10Q8WWZ4 1543 aa23.6■■□□□ 1.37
COMMD6-207ENST00000464050 BIVM-ERCC5R4GMW8 1640 aa23.6■■□□□ 1.37
COMMD6-207ENST00000464050 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
COMMD6-207ENST00000464050 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
COMMD6-207ENST00000464050 SYNJ1O43426 1573 aa23.58■■□□□ 1.37
COMMD6-207ENST00000464050 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
COMMD6-207ENST00000464050 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
COMMD6-207ENST00000464050 ABCA5Q8WWZ7 1642 aa23.51■■□□□ 1.35
COMMD6-207ENST00000464050 RIMBP3CA6NJZ7 1639 aa23.5■■□□□ 1.35
COMMD6-207ENST00000464050 RIMBP3BA6NNM3 1639 aa23.5■■□□□ 1.35
COMMD6-207ENST00000464050 RIMBP3Q9UFD9 1639 aa23.5■■□□□ 1.35
COMMD6-207ENST00000464050 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
COMMD6-207ENST00000464050 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
COMMD6-207ENST00000464050 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
COMMD6-207ENST00000464050 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
COMMD6-207ENST00000464050 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
COMMD6-207ENST00000464050 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
COMMD6-207ENST00000464050 FHAD1B1AJZ9 1412 aa23.31■■□□□ 1.32
COMMD6-207ENST00000464050 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
COMMD6-207ENST00000464050 ARAP1Q96P48 1450 aa23.25■■□□□ 1.31
COMMD6-207ENST00000464050 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
COMMD6-207ENST00000464050 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
COMMD6-207ENST00000464050 NUP160Q12769 1436 aa23.17■■□□□ 1.3
COMMD6-207ENST00000464050 CUL7Q14999 1698 aa23.1■■□□□ 1.29
COMMD6-207ENST00000464050 IGF1RP08069 1367 aa23.07■■□□□ 1.28
COMMD6-207ENST00000464050 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
COMMD6-207ENST00000464050 TRHP20396 242 aaPredicted RBP23.02■■□□□ 1.28
COMMD6-207ENST00000464050 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
COMMD6-207ENST00000464050 RUSC2Q8N2Y8 1516 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms