RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
TMEM54-203ENST00000463914 ABCC9O60706 1549 aa23.56■■□□□ 1.36
TMEM54-203ENST00000463914 CCDC180Q9P1Z9 1646 aa23.44■■□□□ 1.34
TMEM54-203ENST00000463914 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
TMEM54-203ENST00000463914 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
TMEM54-203ENST00000463914 NACADO15069 1562 aa22.15■■□□□ 1.14
TMEM54-203ENST00000463914 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
TMEM54-203ENST00000463914 UNC13AQ9UPW8 1703 aa21.93■■□□□ 1.1
TMEM54-203ENST00000463914 PABPN1Q86U42 306 aaKnown RBP eCLIP21.86■■□□□ 1.09
TMEM54-203ENST00000463914 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
TMEM54-203ENST00000463914 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
TMEM54-203ENST00000463914 ZCCHC6Q5VYS8 1495 aaKnown RBP21.58■■□□□ 1.04
TMEM54-203ENST00000463914 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
TMEM54-203ENST00000463914 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
TMEM54-203ENST00000463914 SHROOM4Q9ULL8 1493 aa21.37■■□□□ 1.01
TMEM54-203ENST00000463914 CC2D2AQ9P2K1 1620 aa21.28■■□□□ 1
TMEM54-203ENST00000463914 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
TMEM54-203ENST00000463914 EIF4G1Q04637 1599 aaKnown RBP21.19■□□□□ 0.98
TMEM54-203ENST00000463914 NCAPD3P42695 1498 aa20.43■□□□□ 0.86
TMEM54-203ENST00000463914 DNAJC5Q9H3Z4 198 aa20.39■□□□□ 0.85
TMEM54-203ENST00000463914 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
TMEM54-203ENST00000463914 SMARCA4P51532 1647 aa20.36■□□□□ 0.85
TMEM54-203ENST00000463914 ERCC6Q03468 1493 aa20.32■□□□□ 0.84
TMEM54-203ENST00000463914 CUX2O14529 1486 aa20.31■□□□□ 0.84
TMEM54-203ENST00000463914 SMARCA2P51531 1590 aa20.31■□□□□ 0.84
TMEM54-203ENST00000463914 HMGXB3Q12766 1538 aa20.31■□□□□ 0.84
TMEM54-203ENST00000463914 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
TMEM54-203ENST00000463914 NESP48681 1621 aa20.21■□□□□ 0.83
TMEM54-203ENST00000463914 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
TMEM54-203ENST00000463914 PEG3Q9GZU2 1588 aa20.14■□□□□ 0.81
TMEM54-203ENST00000463914 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
TMEM54-203ENST00000463914 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
TMEM54-203ENST00000463914 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
TMEM54-203ENST00000463914 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
TMEM54-203ENST00000463914 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
TMEM54-203ENST00000463914 WIZO95785 1651 aa19.85■□□□□ 0.77
TMEM54-203ENST00000463914 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
TMEM54-203ENST00000463914 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
TMEM54-203ENST00000463914 WDR62O43379 1518 aa19.72■□□□□ 0.75
TMEM54-203ENST00000463914 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
TMEM54-203ENST00000463914 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
TMEM54-203ENST00000463914 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.72
TMEM54-203ENST00000463914 TOP2AP11388 1531 aaKnown RBP19.57■□□□□ 0.72
TMEM54-203ENST00000463914 CFTRP13569 1480 aa19.56■□□□□ 0.72
TMEM54-203ENST00000463914 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
TMEM54-203ENST00000463914 TRIM41Q8WV44 630 aa19.48■□□□□ 0.71
TMEM54-203ENST00000463914 PRDM2Q13029 1718 aa19.45■□□□□ 0.7
TMEM54-203ENST00000463914 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
TMEM54-203ENST00000463914 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
TMEM54-203ENST00000463914 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
TMEM54-203ENST00000463914 TOPBP1Q92547 1522 aa19.25■□□□□ 0.67
TMEM54-203ENST00000463914 IFT140Q96RY7 1462 aa19.23■□□□□ 0.67
TMEM54-203ENST00000463914 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
TMEM54-203ENST00000463914 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
TMEM54-203ENST00000463914 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
TMEM54-203ENST00000463914 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
TMEM54-203ENST00000463914 DNMBPQ6XZF7 1577 aa19.16■□□□□ 0.66
TMEM54-203ENST00000463914 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
TMEM54-203ENST00000463914 ARHGEF11O15085 1522 aa19.1■□□□□ 0.65
TMEM54-203ENST00000463914 TARBP1Q13395 1621 aaKnown RBP19.09■□□□□ 0.65
TMEM54-203ENST00000463914 CHD1O14646 1710 aa19.08■□□□□ 0.64
TMEM54-203ENST00000463914 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.646e-9■■■■■ 41.4
TMEM54-203ENST00000463914 POLA1P09884 1462 aaPredicted RBP19.03■□□□□ 0.64
TMEM54-203ENST00000463914 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
TMEM54-203ENST00000463914 ARAP1Q96P48 1450 aa18.91■□□□□ 0.62
TMEM54-203ENST00000463914 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
TMEM54-203ENST00000463914 TDRD9Q8NDG6 1382 aaKnown RBP18.9■□□□□ 0.62
TMEM54-203ENST00000463914 FBLN2P98095 1184 aa18.89■□□□□ 0.61
TMEM54-203ENST00000463914 SOGA1O94964 1423 aa18.89■□□□□ 0.61
TMEM54-203ENST00000463914 CYB5RLQ6IPT4 315 aa18.88■□□□□ 0.61
TMEM54-203ENST00000463914 SNAPC4Q5SXM2 1469 aa18.88■□□□□ 0.61
TMEM54-203ENST00000463914 CUX1P39880 1505 aa18.88■□□□□ 0.61
TMEM54-203ENST00000463914 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
TMEM54-203ENST00000463914 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
TMEM54-203ENST00000463914 MAGI1Q96QZ7 1491 aaPredicted RBP18.78■□□□□ 0.6
TMEM54-203ENST00000463914 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
TMEM54-203ENST00000463914 GRIN2BQ13224 1484 aa18.77■□□□□ 0.59
TMEM54-203ENST00000463914 PBRM1Q86U86 1689 aa18.76■□□□□ 0.59
TMEM54-203ENST00000463914 SYNJ2O15056 1496 aa18.72■□□□□ 0.59
TMEM54-203ENST00000463914 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
TMEM54-203ENST00000463914 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
TMEM54-203ENST00000463914 ABCA5Q8WWZ7 1642 aa18.7■□□□□ 0.58
TMEM54-203ENST00000463914 GAPVD1Q14C86 1478 aa18.68■□□□□ 0.58
TMEM54-203ENST00000463914 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
TMEM54-203ENST00000463914 SUPT5HO00267 1087 aaKnown RBP18.59■□□□□ 0.57
TMEM54-203ENST00000463914 ADAMTS12P58397 1594 aa18.57■□□□□ 0.56
TMEM54-203ENST00000463914 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
TMEM54-203ENST00000463914 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
TMEM54-203ENST00000463914 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
TMEM54-203ENST00000463914 WRNQ14191 1432 aaPredicted RBP eCLIP18.53■□□□□ 0.56
TMEM54-203ENST00000463914 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
TMEM54-203ENST00000463914 CEP170Q5SW79 1584 aa18.52■□□□□ 0.56
TMEM54-203ENST00000463914 NUP160Q12769 1436 aa18.49■□□□□ 0.55
TMEM54-203ENST00000463914 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
TMEM54-203ENST00000463914 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
TMEM54-203ENST00000463914 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
TMEM54-203ENST00000463914 RUSC2Q8N2Y8 1516 aa18.31■□□□□ 0.52
TMEM54-203ENST00000463914 PRG4Q92954 1404 aaPredicted RBP18.3■□□□□ 0.52
TMEM54-203ENST00000463914 KIF13AQ9H1H9 1805 aa18.29■□□□□ 0.52
TMEM54-203ENST00000463914 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms