RNA–Protein interactions for RNA: ENST00000463888.1

KRBOX1-204, Transcript of KRAB box domain containing 1, humanhuman

TSL 2

Gene KRBOX1, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX1-204ENST00000463888 NISCHQ9Y2I1 1504 aa35.62■■■■□ 3.29
KRBOX1-204ENST00000463888 CCDC180Q9P1Z9 1646 aa31.84■■■□□ 2.69
KRBOX1-204ENST00000463888 ABCC9O60706 1549 aa31.16■■■□□ 2.58
KRBOX1-204ENST00000463888 RB1CC1Q8TDY2 1594 aa29.97■■■□□ 2.39
KRBOX1-204ENST00000463888 NACADO15069 1562 aa29.9■■■□□ 2.38
KRBOX1-204ENST00000463888 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
KRBOX1-204ENST00000463888 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
KRBOX1-204ENST00000463888 DCAF8L2P0C7V8 631 aa29.55■■■□□ 2.32
KRBOX1-204ENST00000463888 DCAF1Q9Y4B6 1507 aa29.51■■■□□ 2.32
KRBOX1-204ENST00000463888 UNC13AQ9UPW8 1703 aa29.38■■■□□ 2.29
KRBOX1-204ENST00000463888 BICRAQ9NZM4 1560 aa29.12■■■□□ 2.25
KRBOX1-204ENST00000463888 PABPN1Q86U42 306 aaKnown RBP eCLIP28.99■■■□□ 2.23
KRBOX1-204ENST00000463888 SCRIBQ14160 1630 aa28.96■■■□□ 2.23
KRBOX1-204ENST00000463888 SHROOM4Q9ULL8 1493 aa28.81■■■□□ 2.2
KRBOX1-204ENST00000463888 DNAJC5BQ9UF47 199 aa28.7■■■□□ 2.18
KRBOX1-204ENST00000463888 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
KRBOX1-204ENST00000463888 CC2D2AQ9P2K1 1620 aa28.25■■■□□ 2.11
KRBOX1-204ENST00000463888 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
KRBOX1-204ENST00000463888 SMARCA4P51532 1647 aa27.71■■■□□ 2.03
KRBOX1-204ENST00000463888 BAZ1AQ9NRL2 1556 aaPredicted RBP27.63■■■□□ 2.01
KRBOX1-204ENST00000463888 NCAPD3P42695 1498 aa27.56■■■□□ 2
KRBOX1-204ENST00000463888 ATAD2BQ9ULI0 1458 aa27.56■■■□□ 2
KRBOX1-204ENST00000463888 SMARCA2P51531 1590 aa27.53■■■□□ 2
KRBOX1-204ENST00000463888 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
KRBOX1-204ENST00000463888 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
KRBOX1-204ENST00000463888 MROH2BQ7Z745 1585 aa27.44■■□□□ 1.98
KRBOX1-204ENST00000463888 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
KRBOX1-204ENST00000463888 WIZO95785 1651 aa27.15■■□□□ 1.94
KRBOX1-204ENST00000463888 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
KRBOX1-204ENST00000463888 NESP48681 1621 aa26.94■■□□□ 1.9
KRBOX1-204ENST00000463888 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
KRBOX1-204ENST00000463888 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
KRBOX1-204ENST00000463888 ERCC6Q03468 1493 aa26.86■■□□□ 1.89
KRBOX1-204ENST00000463888 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.87
KRBOX1-204ENST00000463888 CUX2O14529 1486 aa26.7■■□□□ 1.87
KRBOX1-204ENST00000463888 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
KRBOX1-204ENST00000463888 THOC2Q8NI27 1593 aaKnown RBP26.69■■□□□ 1.86
KRBOX1-204ENST00000463888 PDS5BQ9NTI5 1447 aa26.64■■□□□ 1.85
KRBOX1-204ENST00000463888 CFTRP13569 1480 aa26.56■■□□□ 1.84
KRBOX1-204ENST00000463888 CCDC88BA6NC98 1476 aa26.49■■□□□ 1.83
KRBOX1-204ENST00000463888 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
KRBOX1-204ENST00000463888 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
KRBOX1-204ENST00000463888 MRC2Q9UBG0 1479 aa26.43■■□□□ 1.82
KRBOX1-204ENST00000463888 CEP164Q9UPV0 1460 aa26.42■■□□□ 1.82
KRBOX1-204ENST00000463888 WDR62O43379 1518 aa26.41■■□□□ 1.82
KRBOX1-204ENST00000463888 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
KRBOX1-204ENST00000463888 SUPT5HO00267 1087 aaKnown RBP26.05■■□□□ 1.76
KRBOX1-204ENST00000463888 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
KRBOX1-204ENST00000463888 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
KRBOX1-204ENST00000463888 ABCC8Q09428 1581 aa25.96■■□□□ 1.75
KRBOX1-204ENST00000463888 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
KRBOX1-204ENST00000463888 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
KRBOX1-204ENST00000463888 TARBP1Q13395 1621 aaKnown RBP25.8■■□□□ 1.72
KRBOX1-204ENST00000463888 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
KRBOX1-204ENST00000463888 ZNF608Q9ULD9 1512 aaPredicted RBP25.78■■□□□ 1.72
KRBOX1-204ENST00000463888 CUX1P39880 1505 aa25.77■■□□□ 1.72
KRBOX1-204ENST00000463888 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
KRBOX1-204ENST00000463888 FGD5Q6ZNL6 1462 aa25.69■■□□□ 1.7
KRBOX1-204ENST00000463888 RAD54L2Q9Y4B4 1467 aa25.63■■□□□ 1.69
KRBOX1-204ENST00000463888 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
KRBOX1-204ENST00000463888 SOGA1O94964 1423 aa25.58■■□□□ 1.69
KRBOX1-204ENST00000463888 AQRO60306 1485 aaKnown RBP eCLIP25.56■■□□□ 1.68
KRBOX1-204ENST00000463888 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
KRBOX1-204ENST00000463888 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
KRBOX1-204ENST00000463888 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
KRBOX1-204ENST00000463888 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
KRBOX1-204ENST00000463888 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
KRBOX1-204ENST00000463888 ABCA10Q8WWZ4 1543 aa25.45■■□□□ 1.66
KRBOX1-204ENST00000463888 CHD1O14646 1710 aa25.44■■□□□ 1.66
KRBOX1-204ENST00000463888 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
KRBOX1-204ENST00000463888 PBRM1Q86U86 1689 aa25.4■■□□□ 1.66
KRBOX1-204ENST00000463888 OSCARQ8IYS5 282 aa25.4■■□□□ 1.66
KRBOX1-204ENST00000463888 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
KRBOX1-204ENST00000463888 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
KRBOX1-204ENST00000463888 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
KRBOX1-204ENST00000463888 GAPVD1Q14C86 1478 aa25.33■■□□□ 1.65
KRBOX1-204ENST00000463888 SYNJ2O15056 1496 aa25.23■■□□□ 1.63
KRBOX1-204ENST00000463888 RIMBP3CA6NJZ7 1639 aa25.19■■□□□ 1.62
KRBOX1-204ENST00000463888 RIMBP3BA6NNM3 1639 aa25.19■■□□□ 1.62
KRBOX1-204ENST00000463888 RIMBP3Q9UFD9 1639 aa25.19■■□□□ 1.62
KRBOX1-204ENST00000463888 ADAMTS12P58397 1594 aa25.19■■□□□ 1.62
KRBOX1-204ENST00000463888 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
KRBOX1-204ENST00000463888 FBLN2P98095 1184 aa25.16■■□□□ 1.62
KRBOX1-204ENST00000463888 ARHGEF11O15085 1522 aa25.16■■□□□ 1.62
KRBOX1-204ENST00000463888 ERICH3Q5RHP9 1530 aa25.15■■□□□ 1.62
KRBOX1-204ENST00000463888 CHMP7Q8WUX9 453 aaPredicted RBP25.09■■□□□ 1.61
KRBOX1-204ENST00000463888 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
KRBOX1-204ENST00000463888 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
KRBOX1-204ENST00000463888 CEP170Q5SW79 1584 aa24.98■■□□□ 1.59
KRBOX1-204ENST00000463888 NUP160Q12769 1436 aa24.97■■□□□ 1.59
KRBOX1-204ENST00000463888 TRIM41Q8WV44 630 aa24.97■■□□□ 1.59
KRBOX1-204ENST00000463888 ARAP1Q96P48 1450 aa24.95■■□□□ 1.58
KRBOX1-204ENST00000463888 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
KRBOX1-204ENST00000463888 CUL7Q14999 1698 aa24.91■■□□□ 1.58
KRBOX1-204ENST00000463888 SHROOM2Q13796 1616 aa24.86■■□□□ 1.57
KRBOX1-204ENST00000463888 IGF1RP08069 1367 aa24.85■■□□□ 1.57
KRBOX1-204ENST00000463888 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
KRBOX1-204ENST00000463888 ERCC6L2Q5T890 1561 aa24.78■■□□□ 1.56
KRBOX1-204ENST00000463888 CYB5RLQ6IPT4 315 aa24.76■■□□□ 1.55
KRBOX1-204ENST00000463888 CARMIL1Q5VZK9 1371 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms