RNA–Protein interactions for RNA: ENST00000463764.2

TRANK1-202, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

TSL 2

Gene TRANK1, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-202ENST00000463764 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
TRANK1-202ENST00000463764 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
TRANK1-202ENST00000463764 ABCC9O60706 1549 aa23.77■■□□□ 1.4
TRANK1-202ENST00000463764 NACADO15069 1562 aa23.08■■□□□ 1.29
TRANK1-202ENST00000463764 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
TRANK1-202ENST00000463764 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
TRANK1-202ENST00000463764 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
TRANK1-202ENST00000463764 DCAF1Q9Y4B6 1507 aa22.93■■□□□ 1.26
TRANK1-202ENST00000463764 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
TRANK1-202ENST00000463764 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
TRANK1-202ENST00000463764 SCRIBQ14160 1630 aa22.31■■□□□ 1.16
TRANK1-202ENST00000463764 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
TRANK1-202ENST00000463764 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
TRANK1-202ENST00000463764 PABPN1Q86U42 306 aaKnown RBP eCLIP22.13■■□□□ 1.13
TRANK1-202ENST00000463764 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
TRANK1-202ENST00000463764 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
TRANK1-202ENST00000463764 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
TRANK1-202ENST00000463764 BAZ1AQ9NRL2 1556 aaPredicted RBP21.44■■□□□ 1.02
TRANK1-202ENST00000463764 SMARCA4P51532 1647 aa21.41■■□□□ 1.02
TRANK1-202ENST00000463764 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
TRANK1-202ENST00000463764 SMARCA2P51531 1590 aa21.31■■□□□ 1
TRANK1-202ENST00000463764 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
TRANK1-202ENST00000463764 NCAPD3P42695 1498 aa21.22■□□□□ 0.99
TRANK1-202ENST00000463764 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
TRANK1-202ENST00000463764 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
TRANK1-202ENST00000463764 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
TRANK1-202ENST00000463764 BAZ1BQ9UIG0 1483 aaKnown RBP21.11■□□□□ 0.97
TRANK1-202ENST00000463764 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
TRANK1-202ENST00000463764 WIZO95785 1651 aa20.98■□□□□ 0.95
TRANK1-202ENST00000463764 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
TRANK1-202ENST00000463764 LAMC3Q9Y6N6 1575 aa20.72■□□□□ 0.91
TRANK1-202ENST00000463764 ERCC6Q03468 1493 aa20.59■□□□□ 0.89
TRANK1-202ENST00000463764 CADPSQ9ULU8 1353 aa20.59■□□□□ 0.89
TRANK1-202ENST00000463764 NESP48681 1621 aa20.56■□□□□ 0.88
TRANK1-202ENST00000463764 PDS5BQ9NTI5 1447 aa20.55■□□□□ 0.88
TRANK1-202ENST00000463764 CCDC88BA6NC98 1476 aa20.51■□□□□ 0.87
TRANK1-202ENST00000463764 CFTRP13569 1480 aa20.5■□□□□ 0.87
TRANK1-202ENST00000463764 PRDM2Q13029 1718 aa20.5■□□□□ 0.87
TRANK1-202ENST00000463764 SUPT5HO00267 1087 aaKnown RBP20.45■□□□□ 0.86
TRANK1-202ENST00000463764 KIF21AQ7Z4S6 1674 aa20.44■□□□□ 0.86
TRANK1-202ENST00000463764 CUX2O14529 1486 aa20.38■□□□□ 0.85
TRANK1-202ENST00000463764 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
TRANK1-202ENST00000463764 FANCD2Q9BXW9 1451 aa20.37■□□□□ 0.85
TRANK1-202ENST00000463764 THOC2Q8NI27 1593 aaKnown RBP20.36■□□□□ 0.85
TRANK1-202ENST00000463764 MRC2Q9UBG0 1479 aa20.31■□□□□ 0.84
TRANK1-202ENST00000463764 WDR62O43379 1518 aa20.25■□□□□ 0.83
TRANK1-202ENST00000463764 ABCC8Q09428 1581 aa20.18■□□□□ 0.82
TRANK1-202ENST00000463764 URB2Q14146 1524 aaKnown RBP20.11■□□□□ 0.81
TRANK1-202ENST00000463764 DNMBPQ6XZF7 1577 aa20.09■□□□□ 0.81
TRANK1-202ENST00000463764 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
TRANK1-202ENST00000463764 IFT140Q96RY7 1462 aa19.95■□□□□ 0.78
TRANK1-202ENST00000463764 CUX1P39880 1505 aa19.9■□□□□ 0.78
TRANK1-202ENST00000463764 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
TRANK1-202ENST00000463764 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
TRANK1-202ENST00000463764 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
TRANK1-202ENST00000463764 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
TRANK1-202ENST00000463764 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
TRANK1-202ENST00000463764 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
TRANK1-202ENST00000463764 TARBP1Q13395 1621 aaKnown RBP19.82■□□□□ 0.76
TRANK1-202ENST00000463764 SOGA1O94964 1423 aa19.78■□□□□ 0.76
TRANK1-202ENST00000463764 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
TRANK1-202ENST00000463764 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
TRANK1-202ENST00000463764 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
TRANK1-202ENST00000463764 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
TRANK1-202ENST00000463764 ABCA10Q8WWZ4 1543 aa19.7■□□□□ 0.74
TRANK1-202ENST00000463764 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
TRANK1-202ENST00000463764 AQRO60306 1485 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRANK1-202ENST00000463764 GRIN2BQ13224 1484 aa19.6■□□□□ 0.73
TRANK1-202ENST00000463764 TDRD9Q8NDG6 1382 aaKnown RBP19.59■□□□□ 0.73
TRANK1-202ENST00000463764 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
TRANK1-202ENST00000463764 GAPVD1Q14C86 1478 aa19.59■□□□□ 0.73
TRANK1-202ENST00000463764 MAGI1Q96QZ7 1491 aaPredicted RBP19.58■□□□□ 0.72
TRANK1-202ENST00000463764 SNAPC4Q5SXM2 1469 aa19.51■□□□□ 0.71
TRANK1-202ENST00000463764 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
TRANK1-202ENST00000463764 CHD1O14646 1710 aa19.48■□□□□ 0.71
TRANK1-202ENST00000463764 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
TRANK1-202ENST00000463764 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
TRANK1-202ENST00000463764 SYNJ2O15056 1496 aa19.47■□□□□ 0.71
TRANK1-202ENST00000463764 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
TRANK1-202ENST00000463764 ADAMTS12P58397 1594 aa19.43■□□□□ 0.7
TRANK1-202ENST00000463764 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
TRANK1-202ENST00000463764 CUL7Q14999 1698 aa19.4■□□□□ 0.7
TRANK1-202ENST00000463764 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
TRANK1-202ENST00000463764 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
TRANK1-202ENST00000463764 FBLN2P98095 1184 aa19.37■□□□□ 0.69
TRANK1-202ENST00000463764 GRIN2AQ12879 1464 aa19.33■□□□□ 0.68
TRANK1-202ENST00000463764 CLASP1Q7Z460 1538 aa19.26■□□□□ 0.67
TRANK1-202ENST00000463764 IGF1RP08069 1367 aa19.26■□□□□ 0.67
TRANK1-202ENST00000463764 NUP160Q12769 1436 aa19.24■□□□□ 0.67
TRANK1-202ENST00000463764 EEA1Q15075 1411 aa19.24■□□□□ 0.67
TRANK1-202ENST00000463764 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
TRANK1-202ENST00000463764 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
TRANK1-202ENST00000463764 ARHGEF11O15085 1522 aa19.15■□□□□ 0.66
TRANK1-202ENST00000463764 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
TRANK1-202ENST00000463764 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.66
TRANK1-202ENST00000463764 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.66
TRANK1-202ENST00000463764 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.66
TRANK1-202ENST00000463764 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
TRANK1-202ENST00000463764 RUSC2Q8N2Y8 1516 aa19.14■□□□□ 0.65
TRANK1-202ENST00000463764 SHROOM2Q13796 1616 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms