RNA–Protein interactions for RNA: ENST00000463752.1

PRKCB-203, Transcript of protein kinase C beta, humanhuman

TSL 5

Gene PRKCB, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-203ENST00000463752 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.08
PRKCB-203ENST00000463752 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
PRKCB-203ENST00000463752 ABCC9O60706 1549 aa12.8□□□□□ -0.36
PRKCB-203ENST00000463752 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
PRKCB-203ENST00000463752 NACADO15069 1562 aa12.31□□□□□ -0.44
PRKCB-203ENST00000463752 MYO15BQ96JP2 1530 aa12.21□□□□□ -0.45
PRKCB-203ENST00000463752 DCAF8L2P0C7V8 631 aa12.18□□□□□ -0.46
PRKCB-203ENST00000463752 DCAF1Q9Y4B6 1507 aa12.07□□□□□ -0.48
PRKCB-203ENST00000463752 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
PRKCB-203ENST00000463752 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
PRKCB-203ENST00000463752 SHROOM4Q9ULL8 1493 aa11.92□□□□□ -0.5
PRKCB-203ENST00000463752 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
PRKCB-203ENST00000463752 BICRAQ9NZM4 1560 aa11.88□□□□□ -0.51
PRKCB-203ENST00000463752 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
PRKCB-203ENST00000463752 SCRIBQ14160 1630 aa11.78□□□□□ -0.52
PRKCB-203ENST00000463752 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
PRKCB-203ENST00000463752 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
PRKCB-203ENST00000463752 CECR2Q9BXF3 1484 aa11.57□□□□□ -0.56
PRKCB-203ENST00000463752 SMARCA2P51531 1590 aa11.33□□□□□ -0.6
PRKCB-203ENST00000463752 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
PRKCB-203ENST00000463752 BAZ1AQ9NRL2 1556 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-203ENST00000463752 SMARCA4P51532 1647 aa11.31□□□□□ -0.6
PRKCB-203ENST00000463752 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
PRKCB-203ENST00000463752 ATAD2BQ9ULI0 1458 aa11.26□□□□□ -0.61
PRKCB-203ENST00000463752 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
PRKCB-203ENST00000463752 BAZ1BQ9UIG0 1483 aaKnown RBP11.2□□□□□ -0.62
PRKCB-203ENST00000463752 ERCC6Q03468 1493 aa11.13□□□□□ -0.63
PRKCB-203ENST00000463752 MROH2BQ7Z745 1585 aa11.13□□□□□ -0.63
PRKCB-203ENST00000463752 CUX2O14529 1486 aa11.11□□□□□ -0.63
PRKCB-203ENST00000463752 LAMC3Q9Y6N6 1575 aa11.1□□□□□ -0.63
PRKCB-203ENST00000463752 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
PRKCB-203ENST00000463752 WIZO95785 1651 aa11.01□□□□□ -0.65
PRKCB-203ENST00000463752 NESP48681 1621 aa10.99□□□□□ -0.65
PRKCB-203ENST00000463752 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
PRKCB-203ENST00000463752 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
PRKCB-203ENST00000463752 TOP2AP11388 1531 aaKnown RBP10.94□□□□□ -0.66
PRKCB-203ENST00000463752 THOC2Q8NI27 1593 aaKnown RBP10.93□□□□□ -0.66
PRKCB-203ENST00000463752 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
PRKCB-203ENST00000463752 DNAJC5Q9H3Z4 198 aa10.9□□□□□ -0.66
PRKCB-203ENST00000463752 CFTRP13569 1480 aa10.87□□□□□ -0.67
PRKCB-203ENST00000463752 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
PRKCB-203ENST00000463752 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
PRKCB-203ENST00000463752 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
PRKCB-203ENST00000463752 FANCD2Q9BXW9 1451 aa10.84□□□□□ -0.67
PRKCB-203ENST00000463752 WDR62O43379 1518 aa10.84□□□□□ -0.67
PRKCB-203ENST00000463752 CCDC88BA6NC98 1476 aa10.77□□□□□ -0.69
PRKCB-203ENST00000463752 ABCC8Q09428 1581 aa10.76□□□□□ -0.69
PRKCB-203ENST00000463752 URB2Q14146 1524 aaKnown RBP10.69□□□□□ -0.7
PRKCB-203ENST00000463752 IFT140Q96RY7 1462 aa10.66□□□□□ -0.7
PRKCB-203ENST00000463752 DNMBPQ6XZF7 1577 aa10.65□□□□□ -0.71
PRKCB-203ENST00000463752 TOPBP1Q92547 1522 aa10.63□□□□□ -0.71
PRKCB-203ENST00000463752 OSCARQ8IYS5 282 aa10.62□□□□□ -0.71
PRKCB-203ENST00000463752 WDR97A6NE52 1622 aa10.57□□□□□ -0.72
PRKCB-203ENST00000463752 SUPT5HO00267 1087 aaKnown RBP10.55□□□□□ -0.72
PRKCB-203ENST00000463752 TARBP1Q13395 1621 aaKnown RBP10.54□□□□□ -0.72
PRKCB-203ENST00000463752 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
PRKCB-203ENST00000463752 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
PRKCB-203ENST00000463752 ZNF608Q9ULD9 1512 aaPredicted RBP10.52□□□□□ -0.73
PRKCB-203ENST00000463752 SOGA1O94964 1423 aa10.51□□□□□ -0.73
PRKCB-203ENST00000463752 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
PRKCB-203ENST00000463752 AQRO60306 1485 aaKnown RBP eCLIP10.46□□□□□ -0.746e-8■■■■■ 36.8
PRKCB-203ENST00000463752 CUX1P39880 1505 aa10.46□□□□□ -0.74
PRKCB-203ENST00000463752 MAGI1Q96QZ7 1491 aaPredicted RBP10.44□□□□□ -0.74
PRKCB-203ENST00000463752 GRIN2BQ13224 1484 aa10.43□□□□□ -0.74
PRKCB-203ENST00000463752 RAD54L2Q9Y4B4 1467 aa10.43□□□□□ -0.74
PRKCB-203ENST00000463752 CHD1O14646 1710 aa10.43□□□□□ -0.74
PRKCB-203ENST00000463752 FBLN2P98095 1184 aa10.42□□□□□ -0.74
PRKCB-203ENST00000463752 TRIM41Q8WV44 630 aa10.42□□□□□ -0.74
PRKCB-203ENST00000463752 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
PRKCB-203ENST00000463752 TDRD9Q8NDG6 1382 aaKnown RBP10.41□□□□□ -0.74
PRKCB-203ENST00000463752 ABCA10Q8WWZ4 1543 aa10.4□□□□□ -0.74
PRKCB-203ENST00000463752 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
PRKCB-203ENST00000463752 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
PRKCB-203ENST00000463752 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.75
PRKCB-203ENST00000463752 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
PRKCB-203ENST00000463752 RIMBP3CA6NJZ7 1639 aa10.39□□□□□ -0.75
PRKCB-203ENST00000463752 RIMBP3BA6NNM3 1639 aa10.39□□□□□ -0.75
PRKCB-203ENST00000463752 RIMBP3Q9UFD9 1639 aa10.39□□□□□ -0.75
PRKCB-203ENST00000463752 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
PRKCB-203ENST00000463752 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
PRKCB-203ENST00000463752 SYNJ2O15056 1496 aa10.38□□□□□ -0.75
PRKCB-203ENST00000463752 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
PRKCB-203ENST00000463752 SNAPC4Q5SXM2 1469 aa10.37□□□□□ -0.75
PRKCB-203ENST00000463752 ABCA5Q8WWZ7 1642 aa10.36□□□□□ -0.75
PRKCB-203ENST00000463752 ERICH3Q5RHP9 1530 aa10.31□□□□□ -0.76
PRKCB-203ENST00000463752 CLASP1Q7Z460 1538 aa10.31□□□□□ -0.76
PRKCB-203ENST00000463752 CYB5RLQ6IPT4 315 aa10.29□□□□□ -0.76
PRKCB-203ENST00000463752 FHAD1B1AJZ9 1412 aa10.28□□□□□ -0.76
PRKCB-203ENST00000463752 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
PRKCB-203ENST00000463752 ADAMTS12P58397 1594 aa10.26□□□□□ -0.77
PRKCB-203ENST00000463752 ARAP1Q96P48 1450 aa10.23□□□□□ -0.77
PRKCB-203ENST00000463752 NUP160Q12769 1436 aa10.22□□□□□ -0.77
PRKCB-203ENST00000463752 KIF27Q86VH2 1401 aa10.22□□□□□ -0.77
PRKCB-203ENST00000463752 CUL7Q14999 1698 aa10.21□□□□□ -0.78
PRKCB-203ENST00000463752 SHROOM2Q13796 1616 aa10.18□□□□□ -0.78
PRKCB-203ENST00000463752 CEP170Q5SW79 1584 aa10.18□□□□□ -0.78
PRKCB-203ENST00000463752 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
PRKCB-203ENST00000463752 JPH4Q96JJ6 628 aa10.13□□□□□ -0.79
PRKCB-203ENST00000463752 IGF1RP08069 1367 aa10.13□□□□□ -0.79
PRKCB-203ENST00000463752 KIAA0586Q9BVV6 1533 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms