RNA–Protein interactions for RNA: ENST00000463714.2

LCN12-203, Transcript of lipocalin 12, humanhuman

TSL 5

Gene LCN12, Length 731 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN12-203ENST00000463714 NISCHQ9Y2I1 1504 aa38.09■■■■□ 3.69
LCN12-203ENST00000463714 CCDC180Q9P1Z9 1646 aa33.99■■■■□ 3.03
LCN12-203ENST00000463714 ABCC9O60706 1549 aa33.74■■■□□ 2.99
LCN12-203ENST00000463714 RB1CC1Q8TDY2 1594 aa32.23■■■□□ 2.75
LCN12-203ENST00000463714 NACADO15069 1562 aa31.98■■■□□ 2.71
LCN12-203ENST00000463714 DCAF8L2P0C7V8 631 aa31.89■■■□□ 2.7
LCN12-203ENST00000463714 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
LCN12-203ENST00000463714 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
LCN12-203ENST00000463714 DCAF1Q9Y4B6 1507 aa31.53■■■□□ 2.64
LCN12-203ENST00000463714 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
LCN12-203ENST00000463714 PABPN1Q86U42 306 aaKnown RBP eCLIP31.36■■■□□ 2.61
LCN12-203ENST00000463714 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
LCN12-203ENST00000463714 BICRAQ9NZM4 1560 aa31.11■■■□□ 2.57
LCN12-203ENST00000463714 SCRIBQ14160 1630 aa31■■■□□ 2.55
LCN12-203ENST00000463714 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
LCN12-203ENST00000463714 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
LCN12-203ENST00000463714 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.46
LCN12-203ENST00000463714 CECR2Q9BXF3 1484 aa30.38■■■□□ 2.45
LCN12-203ENST00000463714 SMARCA4P51532 1647 aa29.63■■■□□ 2.33
LCN12-203ENST00000463714 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
LCN12-203ENST00000463714 SMARCA2P51531 1590 aa29.44■■■□□ 2.3
LCN12-203ENST00000463714 NCAPD3P42695 1498 aa29.44■■■□□ 2.3
LCN12-203ENST00000463714 ATAD2BQ9ULI0 1458 aa29.44■■■□□ 2.3
LCN12-203ENST00000463714 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
LCN12-203ENST00000463714 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
LCN12-203ENST00000463714 PEG3Q9GZU2 1588 aa29.32■■■□□ 2.28
LCN12-203ENST00000463714 ERCC6Q03468 1493 aa29.24■■■□□ 2.27
LCN12-203ENST00000463714 BAZ1BQ9UIG0 1483 aaKnown RBP29.24■■■□□ 2.27
LCN12-203ENST00000463714 WIZO95785 1651 aa29.05■■■□□ 2.24
LCN12-203ENST00000463714 CUX2O14529 1486 aa29.04■■■□□ 2.24
LCN12-203ENST00000463714 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
LCN12-203ENST00000463714 NESP48681 1621 aa28.95■■■□□ 2.23
LCN12-203ENST00000463714 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
LCN12-203ENST00000463714 TOP2AP11388 1531 aaKnown RBP28.76■■■□□ 2.19
LCN12-203ENST00000463714 DNAJC5Q9H3Z4 198 aa28.73■■■□□ 2.19
LCN12-203ENST00000463714 PDS5BQ9NTI5 1447 aa28.7■■■□□ 2.19
LCN12-203ENST00000463714 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
LCN12-203ENST00000463714 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
LCN12-203ENST00000463714 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
LCN12-203ENST00000463714 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
LCN12-203ENST00000463714 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
LCN12-203ENST00000463714 CFTRP13569 1480 aa28.39■■■□□ 2.13
LCN12-203ENST00000463714 CCDC88BA6NC98 1476 aa28.36■■■□□ 2.13
LCN12-203ENST00000463714 WDR62O43379 1518 aa28.34■■■□□ 2.13
LCN12-203ENST00000463714 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
LCN12-203ENST00000463714 PRDM2Q13029 1718 aa28.28■■■□□ 2.12
LCN12-203ENST00000463714 SUPT5HO00267 1087 aaKnown RBP28.09■■■□□ 2.09
LCN12-203ENST00000463714 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
LCN12-203ENST00000463714 TOPBP1Q92547 1522 aa27.81■■■□□ 2.04
LCN12-203ENST00000463714 DNMBPQ6XZF7 1577 aa27.8■■■□□ 2.04
LCN12-203ENST00000463714 IFT140Q96RY7 1462 aa27.78■■■□□ 2.04
LCN12-203ENST00000463714 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
LCN12-203ENST00000463714 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
LCN12-203ENST00000463714 OSCARQ8IYS5 282 aa27.69■■■□□ 2.02
LCN12-203ENST00000463714 ZNF608Q9ULD9 1512 aaPredicted RBP27.65■■■□□ 2.02
LCN12-203ENST00000463714 EIF4G3O43432 1585 aaKnown RBP27.61■■■□□ 2.01
LCN12-203ENST00000463714 CUX1P39880 1505 aa27.57■■■□□ 2
LCN12-203ENST00000463714 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
LCN12-203ENST00000463714 TARBP1Q13395 1621 aaKnown RBP27.52■■■□□ 2
LCN12-203ENST00000463714 FGD5Q6ZNL6 1462 aa27.49■■□□□ 1.99
LCN12-203ENST00000463714 AQRO60306 1485 aaKnown RBP eCLIP27.42■■□□□ 1.98
LCN12-203ENST00000463714 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
LCN12-203ENST00000463714 SOGA1O94964 1423 aa27.4■■□□□ 1.98
LCN12-203ENST00000463714 CHD1O14646 1710 aa27.35■■□□□ 1.97
LCN12-203ENST00000463714 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
LCN12-203ENST00000463714 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
LCN12-203ENST00000463714 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
LCN12-203ENST00000463714 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
LCN12-203ENST00000463714 FBLN2P98095 1184 aa27.33■■□□□ 1.97
LCN12-203ENST00000463714 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
LCN12-203ENST00000463714 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.96
LCN12-203ENST00000463714 TOP2BQ02880 1626 aa27.31■■□□□ 1.96
LCN12-203ENST00000463714 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
LCN12-203ENST00000463714 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
LCN12-203ENST00000463714 ARHGEF11O15085 1522 aa27.28■■□□□ 1.96
LCN12-203ENST00000463714 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
LCN12-203ENST00000463714 ABCA10Q8WWZ4 1543 aa27.21■■□□□ 1.95
LCN12-203ENST00000463714 MAGI1Q96QZ7 1491 aaPredicted RBP27.17■■□□□ 1.94
LCN12-203ENST00000463714 GRIN2BQ13224 1484 aa27.16■■□□□ 1.94
LCN12-203ENST00000463714 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
LCN12-203ENST00000463714 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
LCN12-203ENST00000463714 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
LCN12-203ENST00000463714 GAPVD1Q14C86 1478 aa27.12■■□□□ 1.93
LCN12-203ENST00000463714 SYNJ2O15056 1496 aa27.06■■□□□ 1.92
LCN12-203ENST00000463714 CYB5RLQ6IPT4 315 aa27.04■■□□□ 1.92
LCN12-203ENST00000463714 CLASP1Q7Z460 1538 aa27■■□□□ 1.91
LCN12-203ENST00000463714 ARAP1Q96P48 1450 aa26.99■■□□□ 1.91
LCN12-203ENST00000463714 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
LCN12-203ENST00000463714 ERICH3Q5RHP9 1530 aa26.9■■□□□ 1.9
LCN12-203ENST00000463714 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
LCN12-203ENST00000463714 TRHP20396 242 aaPredicted RBP26.81■■□□□ 1.88
LCN12-203ENST00000463714 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
LCN12-203ENST00000463714 KIF27Q86VH2 1401 aa26.76■■□□□ 1.87
LCN12-203ENST00000463714 CEP170Q5SW79 1584 aa26.68■■□□□ 1.86
LCN12-203ENST00000463714 CUL7Q14999 1698 aa26.67■■□□□ 1.86
LCN12-203ENST00000463714 NUP160Q12769 1436 aa26.67■■□□□ 1.86
LCN12-203ENST00000463714 IGF1RP08069 1367 aa26.61■■□□□ 1.85
LCN12-203ENST00000463714 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
LCN12-203ENST00000463714 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
LCN12-203ENST00000463714 RUSC2Q8N2Y8 1516 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms