RNA–Protein interactions for RNA: ENST00000463708.1

UQCRC1-205, Transcript of ubiquinol-cytochrome c reductase core protein 1, humanhuman

TSL 3

Gene UQCRC1, Length 739 nt, Biotype retained intron, Subcellular localisation Mitochondria, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UQCRC1-205ENST00000463708 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
UQCRC1-205ENST00000463708 CCDC180Q9P1Z9 1646 aa28.72■■■□□ 2.19
UQCRC1-205ENST00000463708 ABCC9O60706 1549 aa27.98■■■□□ 2.07
UQCRC1-205ENST00000463708 RB1CC1Q8TDY2 1594 aa27.04■■□□□ 1.92
UQCRC1-205ENST00000463708 NACADO15069 1562 aa26.96■■□□□ 1.91
UQCRC1-205ENST00000463708 MYO15BQ96JP2 1530 aa26.76■■□□□ 1.87
UQCRC1-205ENST00000463708 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
UQCRC1-205ENST00000463708 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
UQCRC1-205ENST00000463708 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
UQCRC1-205ENST00000463708 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
UQCRC1-205ENST00000463708 BICRAQ9NZM4 1560 aa26.08■■□□□ 1.77
UQCRC1-205ENST00000463708 SCRIBQ14160 1630 aa26.06■■□□□ 1.76
UQCRC1-205ENST00000463708 PABPN1Q86U42 306 aaKnown RBP eCLIP26.03■■□□□ 1.76
UQCRC1-205ENST00000463708 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
UQCRC1-205ENST00000463708 DNAJC5BQ9UF47 199 aa25.6■■□□□ 1.69
UQCRC1-205ENST00000463708 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
UQCRC1-205ENST00000463708 CC2D2AQ9P2K1 1620 aa25.38■■□□□ 1.65
UQCRC1-205ENST00000463708 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
UQCRC1-205ENST00000463708 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
UQCRC1-205ENST00000463708 BAZ1AQ9NRL2 1556 aaPredicted RBP24.93■■□□□ 1.58
UQCRC1-205ENST00000463708 SMARCA2P51531 1590 aa24.84■■□□□ 1.57
UQCRC1-205ENST00000463708 NCAPD3P42695 1498 aa24.77■■□□□ 1.56
UQCRC1-205ENST00000463708 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
UQCRC1-205ENST00000463708 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
UQCRC1-205ENST00000463708 PEG3Q9GZU2 1588 aa24.71■■□□□ 1.55
UQCRC1-205ENST00000463708 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
UQCRC1-205ENST00000463708 BAZ1BQ9UIG0 1483 aaKnown RBP24.62■■□□□ 1.53
UQCRC1-205ENST00000463708 WIZO95785 1651 aa24.43■■□□□ 1.5
UQCRC1-205ENST00000463708 RSF1Q96T23 1441 aaPredicted RBP24.29■■□□□ 1.48
UQCRC1-205ENST00000463708 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
UQCRC1-205ENST00000463708 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
UQCRC1-205ENST00000463708 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.47
UQCRC1-205ENST00000463708 NESP48681 1621 aa24.14■■□□□ 1.46
UQCRC1-205ENST00000463708 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
UQCRC1-205ENST00000463708 CUX2O14529 1486 aa24.04■■□□□ 1.44
UQCRC1-205ENST00000463708 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
UQCRC1-205ENST00000463708 KIF21AQ7Z4S6 1674 aa24.02■■□□□ 1.44
UQCRC1-205ENST00000463708 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
UQCRC1-205ENST00000463708 THOC2Q8NI27 1593 aaKnown RBP23.94■■□□□ 1.42
UQCRC1-205ENST00000463708 CFTRP13569 1480 aa23.88■■□□□ 1.41
UQCRC1-205ENST00000463708 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
UQCRC1-205ENST00000463708 CEP164Q9UPV0 1460 aa23.82■■□□□ 1.4
UQCRC1-205ENST00000463708 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
UQCRC1-205ENST00000463708 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
UQCRC1-205ENST00000463708 WDR62O43379 1518 aa23.72■■□□□ 1.39
UQCRC1-205ENST00000463708 SUPT5HO00267 1087 aaKnown RBP23.57■■□□□ 1.36
UQCRC1-205ENST00000463708 URB2Q14146 1524 aaKnown RBP23.51■■□□□ 1.35
UQCRC1-205ENST00000463708 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
UQCRC1-205ENST00000463708 DNMBPQ6XZF7 1577 aa23.43■■□□□ 1.34
UQCRC1-205ENST00000463708 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
UQCRC1-205ENST00000463708 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
UQCRC1-205ENST00000463708 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
UQCRC1-205ENST00000463708 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
UQCRC1-205ENST00000463708 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
UQCRC1-205ENST00000463708 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
UQCRC1-205ENST00000463708 CUX1P39880 1505 aa23.14■■□□□ 1.3
UQCRC1-205ENST00000463708 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
UQCRC1-205ENST00000463708 FGD5Q6ZNL6 1462 aa23.11■■□□□ 1.29
UQCRC1-205ENST00000463708 ZNF608Q9ULD9 1512 aaPredicted RBP23.1■■□□□ 1.29
UQCRC1-205ENST00000463708 SOGA1O94964 1423 aa23.08■■□□□ 1.28
UQCRC1-205ENST00000463708 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
UQCRC1-205ENST00000463708 RAD54L2Q9Y4B4 1467 aa23.01■■□□□ 1.27
UQCRC1-205ENST00000463708 TOP2BQ02880 1626 aa23■■□□□ 1.27
UQCRC1-205ENST00000463708 WRNQ14191 1432 aaPredicted RBP eCLIP22.99■■□□□ 1.27
UQCRC1-205ENST00000463708 AQRO60306 1485 aaKnown RBP eCLIP22.96■■□□□ 1.271e-7■■■■■ 31.6
UQCRC1-205ENST00000463708 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
UQCRC1-205ENST00000463708 CHD1O14646 1710 aa22.93■■□□□ 1.26
UQCRC1-205ENST00000463708 SYNJ1O43426 1573 aa22.93■■□□□ 1.26
UQCRC1-205ENST00000463708 PBRM1Q86U86 1689 aa22.92■■□□□ 1.26
UQCRC1-205ENST00000463708 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
UQCRC1-205ENST00000463708 TDRD9Q8NDG6 1382 aaKnown RBP22.89■■□□□ 1.26
UQCRC1-205ENST00000463708 ABCA5Q8WWZ7 1642 aa22.86■■□□□ 1.25
UQCRC1-205ENST00000463708 GRIN2BQ13224 1484 aa22.86■■□□□ 1.25
UQCRC1-205ENST00000463708 MAGI1Q96QZ7 1491 aaPredicted RBP22.85■■□□□ 1.25
UQCRC1-205ENST00000463708 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
UQCRC1-205ENST00000463708 SNAPC4Q5SXM2 1469 aa22.82■■□□□ 1.24
UQCRC1-205ENST00000463708 FBLN2P98095 1184 aa22.74■■□□□ 1.23
UQCRC1-205ENST00000463708 SYNJ2O15056 1496 aa22.73■■□□□ 1.23
UQCRC1-205ENST00000463708 CHMP7Q8WUX9 453 aaPredicted RBP22.69■■□□□ 1.22
UQCRC1-205ENST00000463708 ERICH3Q5RHP9 1530 aa22.68■■□□□ 1.22
UQCRC1-205ENST00000463708 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
UQCRC1-205ENST00000463708 RIMBP3CA6NJZ7 1639 aa22.64■■□□□ 1.21
UQCRC1-205ENST00000463708 RIMBP3BA6NNM3 1639 aa22.64■■□□□ 1.21
UQCRC1-205ENST00000463708 RIMBP3Q9UFD9 1639 aa22.64■■□□□ 1.21
UQCRC1-205ENST00000463708 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
UQCRC1-205ENST00000463708 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
UQCRC1-205ENST00000463708 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
UQCRC1-205ENST00000463708 GRIN2AQ12879 1464 aa22.56■■□□□ 1.2
UQCRC1-205ENST00000463708 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
UQCRC1-205ENST00000463708 CUL7Q14999 1698 aa22.53■■□□□ 1.2
UQCRC1-205ENST00000463708 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
UQCRC1-205ENST00000463708 NUP160Q12769 1436 aa22.44■■□□□ 1.18
UQCRC1-205ENST00000463708 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
UQCRC1-205ENST00000463708 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
UQCRC1-205ENST00000463708 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
UQCRC1-205ENST00000463708 IGF1RP08069 1367 aa22.35■■□□□ 1.17
UQCRC1-205ENST00000463708 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
UQCRC1-205ENST00000463708 CYB5RLQ6IPT4 315 aa22.3■■□□□ 1.16
UQCRC1-205ENST00000463708 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
UQCRC1-205ENST00000463708 KIAA0586Q9BVV6 1533 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms