RNA–Protein interactions for RNA: ENST00000463609.1

DMD-217, Transcript of dystrophin, humanhuman

TSL 4

Gene DMD, Length 554 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-217ENST00000463609 NISCHQ9Y2I1 1504 aa28.77■■■□□ 2.2
DMD-217ENST00000463609 AEBP2Q6ZN18 517 aaPredicted RBP26.11■■□□□ 1.77
DMD-217ENST00000463609 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
DMD-217ENST00000463609 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
DMD-217ENST00000463609 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
DMD-217ENST00000463609 ABCC9O60706 1549 aa24.05■■□□□ 1.44
DMD-217ENST00000463609 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
DMD-217ENST00000463609 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.43
DMD-217ENST00000463609 NACADO15069 1562 aa23.77■■□□□ 1.4
DMD-217ENST00000463609 RB1CC1Q8TDY2 1594 aa23.6■■□□□ 1.37
DMD-217ENST00000463609 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
DMD-217ENST00000463609 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
DMD-217ENST00000463609 SCRIBQ14160 1630 aa22.97■■□□□ 1.27
DMD-217ENST00000463609 SHROOM4Q9ULL8 1493 aa22.86■■□□□ 1.25
DMD-217ENST00000463609 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
DMD-217ENST00000463609 PABPN1Q86U42 306 aaKnown RBP eCLIP22.5■■□□□ 1.19
DMD-217ENST00000463609 BAZ1AQ9NRL2 1556 aaPredicted RBP22.28■■□□□ 1.16
DMD-217ENST00000463609 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
DMD-217ENST00000463609 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
DMD-217ENST00000463609 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
DMD-217ENST00000463609 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
DMD-217ENST00000463609 PEG3Q9GZU2 1588 aa22.1■■□□□ 1.13
DMD-217ENST00000463609 MROH2BQ7Z745 1585 aa22.09■■□□□ 1.13
DMD-217ENST00000463609 RSF1Q96T23 1441 aaPredicted RBP22.07■■□□□ 1.12
DMD-217ENST00000463609 PHF23Q9BUL5 403 aaPredicted RBP22.07■■□□□ 1.12
DMD-217ENST00000463609 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
DMD-217ENST00000463609 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
DMD-217ENST00000463609 NCAPD3P42695 1498 aa21.91■■□□□ 1.1
DMD-217ENST00000463609 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
DMD-217ENST00000463609 WIZO95785 1651 aa21.86■■□□□ 1.09
DMD-217ENST00000463609 HMGXB3Q12766 1538 aa21.85■■□□□ 1.09
DMD-217ENST00000463609 TOP2AP11388 1531 aaKnown RBP21.75■■□□□ 1.07
DMD-217ENST00000463609 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
DMD-217ENST00000463609 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
DMD-217ENST00000463609 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
DMD-217ENST00000463609 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
DMD-217ENST00000463609 CFTRP13569 1480 aa21.26■□□□□ 0.99
DMD-217ENST00000463609 CADPSQ9ULU8 1353 aa21.23■□□□□ 0.99
DMD-217ENST00000463609 LAMC3Q9Y6N6 1575 aa21.23■□□□□ 0.99
DMD-217ENST00000463609 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
DMD-217ENST00000463609 PDS5BQ9NTI5 1447 aa21.03■□□□□ 0.96
DMD-217ENST00000463609 NESP48681 1621 aa20.99■□□□□ 0.95
DMD-217ENST00000463609 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
DMD-217ENST00000463609 ABCC8Q09428 1581 aa20.86■□□□□ 0.93
DMD-217ENST00000463609 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
DMD-217ENST00000463609 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
DMD-217ENST00000463609 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
DMD-217ENST00000463609 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.92
DMD-217ENST00000463609 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
DMD-217ENST00000463609 DNMBPQ6XZF7 1577 aa20.74■□□□□ 0.91
DMD-217ENST00000463609 MRC2Q9UBG0 1479 aa20.73■□□□□ 0.91
DMD-217ENST00000463609 ERCC6Q03468 1493 aa20.72■□□□□ 0.91
DMD-217ENST00000463609 WDR62O43379 1518 aa20.7■□□□□ 0.9
DMD-217ENST00000463609 CUX1P39880 1505 aa20.7■□□□□ 0.9
DMD-217ENST00000463609 THOC2Q8NI27 1593 aaKnown RBP20.69■□□□□ 0.9
DMD-217ENST00000463609 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
DMD-217ENST00000463609 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
DMD-217ENST00000463609 FOXD1Q16676 465 aa20.67■□□□□ 0.9
DMD-217ENST00000463609 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
DMD-217ENST00000463609 TRIM41Q8WV44 630 aa20.58■□□□□ 0.89
DMD-217ENST00000463609 POLA1P09884 1462 aaPredicted RBP20.53■□□□□ 0.88
DMD-217ENST00000463609 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
DMD-217ENST00000463609 CUX2O14529 1486 aa20.5■□□□□ 0.87
DMD-217ENST00000463609 WDR97A6NE52 1622 aa20.49■□□□□ 0.87
DMD-217ENST00000463609 TARBP1Q13395 1621 aaKnown RBP20.46■□□□□ 0.87
DMD-217ENST00000463609 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
DMD-217ENST00000463609 IFT140Q96RY7 1462 aa20.45■□□□□ 0.86
DMD-217ENST00000463609 SOGA1O94964 1423 aa20.44■□□□□ 0.86
DMD-217ENST00000463609 EEA1Q15075 1411 aa20.41■□□□□ 0.86
DMD-217ENST00000463609 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
DMD-217ENST00000463609 KIF27Q86VH2 1401 aa20.33■□□□□ 0.84
DMD-217ENST00000463609 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
DMD-217ENST00000463609 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
DMD-217ENST00000463609 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
DMD-217ENST00000463609 GAPVD1Q14C86 1478 aa20.23■□□□□ 0.83
DMD-217ENST00000463609 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
DMD-217ENST00000463609 IGF1RP08069 1367 aa20.19■□□□□ 0.82
DMD-217ENST00000463609 GRIN2BQ13224 1484 aa20.18■□□□□ 0.82
DMD-217ENST00000463609 RUSC2Q8N2Y8 1516 aa20.18■□□□□ 0.82
DMD-217ENST00000463609 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
DMD-217ENST00000463609 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
DMD-217ENST00000463609 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
DMD-217ENST00000463609 CUL7Q14999 1698 aa20.16■□□□□ 0.82
DMD-217ENST00000463609 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
DMD-217ENST00000463609 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
DMD-217ENST00000463609 PRXQ9BXM0 1461 aa20.12■□□□□ 0.81
DMD-217ENST00000463609 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
DMD-217ENST00000463609 KIF21BO75037 1637 aa20.1■□□□□ 0.81
DMD-217ENST00000463609 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
DMD-217ENST00000463609 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
DMD-217ENST00000463609 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
DMD-217ENST00000463609 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.8
DMD-217ENST00000463609 SYNJ2O15056 1496 aa19.99■□□□□ 0.79
DMD-217ENST00000463609 SNAPC4Q5SXM2 1469 aa19.98■□□□□ 0.79
DMD-217ENST00000463609 GOLGA3Q08378 1498 aa19.95■□□□□ 0.78
DMD-217ENST00000463609 FAM9AQ8IZU1 332 aaPredicted RBP19.93■□□□□ 0.78
DMD-217ENST00000463609 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
DMD-217ENST00000463609 TNIKQ9UKE5 1360 aa19.85■□□□□ 0.77
DMD-217ENST00000463609 NUP160Q12769 1436 aa19.85■□□□□ 0.77
DMD-217ENST00000463609 CHMP7Q8WUX9 453 aaPredicted RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms