RNA–Protein interactions for RNA: ENST00000463601.1

TSC2-209, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-209ENST00000463601 NISCHQ9Y2I1 1504 aa48.01■■■■■ 5.28
TSC2-209ENST00000463601 CCDC180Q9P1Z9 1646 aa42.95■■■■■ 4.47
TSC2-209ENST00000463601 ABCC9O60706 1549 aa42.79■■■■■ 4.44
TSC2-209ENST00000463601 RB1CC1Q8TDY2 1594 aa40.76■■■■■ 4.12
TSC2-209ENST00000463601 NACADO15069 1562 aa40.53■■■■■ 4.08
TSC2-209ENST00000463601 DCAF8L2P0C7V8 631 aa40.45■■■■■ 4.07
TSC2-209ENST00000463601 MYO15BQ96JP2 1530 aa40.01■■■■■ 4
TSC2-209ENST00000463601 DNAJC5BQ9UF47 199 aa39.98■■■■□ 3.99
TSC2-209ENST00000463601 UNC13AQ9UPW8 1703 aa39.97■■■■□ 3.99
TSC2-209ENST00000463601 PABPN1Q86U42 306 aaKnown RBP eCLIP39.89■■■■□ 3.98
TSC2-209ENST00000463601 ZCCHC6Q5VYS8 1495 aaKnown RBP39.83■■■■□ 3.97
TSC2-209ENST00000463601 BICRAQ9NZM4 1560 aa39.65■■■■□ 3.94
TSC2-209ENST00000463601 DCAF1Q9Y4B6 1507 aa39.61■■■■□ 3.93
TSC2-209ENST00000463601 SCRIBQ14160 1630 aa39.23■■■■□ 3.87
TSC2-209ENST00000463601 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
TSC2-209ENST00000463601 CC2D2AQ9P2K1 1620 aa38.66■■■■□ 3.78
TSC2-209ENST00000463601 EIF4G1Q04637 1599 aaKnown RBP38.61■■■■□ 3.77
TSC2-209ENST00000463601 CECR2Q9BXF3 1484 aa38.48■■■■□ 3.75
TSC2-209ENST00000463601 NCAPD3P42695 1498 aa37.42■■■■□ 3.58
TSC2-209ENST00000463601 SMARCA4P51532 1647 aa37.42■■■■□ 3.58
TSC2-209ENST00000463601 ATAD2BQ9ULI0 1458 aa37.38■■■■□ 3.57
TSC2-209ENST00000463601 SMARCA2P51531 1590 aa37.25■■■■□ 3.55
TSC2-209ENST00000463601 BAZ1AQ9NRL2 1556 aaPredicted RBP37.21■■■■□ 3.55
TSC2-209ENST00000463601 HMGXB3Q12766 1538 aa37.16■■■■□ 3.54
TSC2-209ENST00000463601 MROH2BQ7Z745 1585 aa37.04■■■■□ 3.52
TSC2-209ENST00000463601 BAZ1BQ9UIG0 1483 aaKnown RBP37.01■■■■□ 3.52
TSC2-209ENST00000463601 PEG3Q9GZU2 1588 aa37.01■■■■□ 3.52
TSC2-209ENST00000463601 ERCC6Q03468 1493 aa36.87■■■■□ 3.49
TSC2-209ENST00000463601 NESP48681 1621 aa36.85■■■■□ 3.49
TSC2-209ENST00000463601 CUX2O14529 1486 aa36.69■■■■□ 3.46
TSC2-209ENST00000463601 WIZO95785 1651 aa36.63■■■■□ 3.45
TSC2-209ENST00000463601 LAMC3Q9Y6N6 1575 aa36.54■■■■□ 3.44
TSC2-209ENST00000463601 DNAJC5Q9H3Z4 198 aa36.44■■■■□ 3.42
TSC2-209ENST00000463601 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
TSC2-209ENST00000463601 KIF21AQ7Z4S6 1674 aa36.39■■■■□ 3.42
TSC2-209ENST00000463601 RSF1Q96T23 1441 aaPredicted RBP36.34■■■■□ 3.41
TSC2-209ENST00000463601 CADPSQ9ULU8 1353 aa36.3■■■■□ 3.4
TSC2-209ENST00000463601 PDS5BQ9NTI5 1447 aa36.3■■■■□ 3.4
TSC2-209ENST00000463601 TOP2AP11388 1531 aaKnown RBP36.12■■■■□ 3.37
TSC2-209ENST00000463601 MRC2Q9UBG0 1479 aa36.01■■■■□ 3.36
TSC2-209ENST00000463601 CFTRP13569 1480 aa35.94■■■■□ 3.34
TSC2-209ENST00000463601 WDR62O43379 1518 aa35.93■■■■□ 3.34
TSC2-209ENST00000463601 FANCD2Q9BXW9 1451 aa35.91■■■■□ 3.34
TSC2-209ENST00000463601 CEP164Q9UPV0 1460 aa35.91■■■■□ 3.34
TSC2-209ENST00000463601 CCDC88BA6NC98 1476 aa35.73■■■■□ 3.31
TSC2-209ENST00000463601 PRDM2Q13029 1718 aa35.66■■■■□ 3.3
TSC2-209ENST00000463601 URB2Q14146 1524 aaKnown RBP35.64■■■■□ 3.3
TSC2-209ENST00000463601 TOPBP1Q92547 1522 aa35.27■■■■□ 3.24
TSC2-209ENST00000463601 ZNF608Q9ULD9 1512 aaPredicted RBP35.17■■■■□ 3.22
TSC2-209ENST00000463601 IFT140Q96RY7 1462 aa35.17■■■■□ 3.22
TSC2-209ENST00000463601 DNMBPQ6XZF7 1577 aa35.15■■■■□ 3.22
TSC2-209ENST00000463601 ABCC8Q09428 1581 aa35.13■■■■□ 3.21
TSC2-209ENST00000463601 OSCARQ8IYS5 282 aa35.07■■■■□ 3.2
TSC2-209ENST00000463601 TRIM41Q8WV44 630 aa34.99■■■■□ 3.19
TSC2-209ENST00000463601 EIF4G3O43432 1585 aaKnown RBP34.97■■■■□ 3.19
TSC2-209ENST00000463601 TARBP1Q13395 1621 aaKnown RBP34.96■■■■□ 3.19
TSC2-209ENST00000463601 POLA1P09884 1462 aaPredicted RBP34.93■■■■□ 3.18
TSC2-209ENST00000463601 SUPT5HO00267 1087 aaKnown RBP34.93■■■■□ 3.18
TSC2-209ENST00000463601 AQRO60306 1485 aaKnown RBP eCLIP34.87■■■■□ 3.17
TSC2-209ENST00000463601 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
TSC2-209ENST00000463601 CUX1P39880 1505 aa34.78■■■■□ 3.16
TSC2-209ENST00000463601 SOGA1O94964 1423 aa34.75■■■■□ 3.15
TSC2-209ENST00000463601 FGD5Q6ZNL6 1462 aa34.75■■■■□ 3.15
TSC2-209ENST00000463601 CHD1O14646 1710 aa34.7■■■■□ 3.15
TSC2-209ENST00000463601 TDRD9Q8NDG6 1382 aaKnown RBP34.69■■■■□ 3.14
TSC2-209ENST00000463601 RIMBP3CA6NJZ7 1639 aa34.66■■■■□ 3.14
TSC2-209ENST00000463601 RIMBP3BA6NNM3 1639 aa34.66■■■■□ 3.14
TSC2-209ENST00000463601 RIMBP3Q9UFD9 1639 aa34.66■■■■□ 3.14
TSC2-209ENST00000463601 FBLN2P98095 1184 aa34.57■■■■□ 3.12
TSC2-209ENST00000463601 ARHGEF11O15085 1522 aa34.55■■■■□ 3.12
TSC2-209ENST00000463601 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
TSC2-209ENST00000463601 SNAPC4Q5SXM2 1469 aa34.51■■■■□ 3.11
TSC2-209ENST00000463601 GRIN2BQ13224 1484 aa34.4■■■■□ 3.1
TSC2-209ENST00000463601 MAGI1Q96QZ7 1491 aaPredicted RBP34.37■■■■□ 3.09
TSC2-209ENST00000463601 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
TSC2-209ENST00000463601 ABCA10Q8WWZ4 1543 aa34.34■■■■□ 3.09
TSC2-209ENST00000463601 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
TSC2-209ENST00000463601 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.08
TSC2-209ENST00000463601 ABCA5Q8WWZ7 1642 aa34.3■■■■□ 3.08
TSC2-209ENST00000463601 CYB5RLQ6IPT4 315 aa34.29■■■■□ 3.08
TSC2-209ENST00000463601 SYNJ1O43426 1573 aa34.27■■■■□ 3.08
TSC2-209ENST00000463601 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
TSC2-209ENST00000463601 BIVM-ERCC5R4GMW8 1640 aa34.26■■■■□ 3.08
TSC2-209ENST00000463601 CLASP1Q7Z460 1538 aa34.26■■■■□ 3.08
TSC2-209ENST00000463601 TOP2BQ02880 1626 aa34.25■■■■□ 3.07
TSC2-209ENST00000463601 WRNQ14191 1432 aaPredicted RBP eCLIP34.24■■■■□ 3.07
TSC2-209ENST00000463601 ARAP1Q96P48 1450 aa34.24■■■■□ 3.07
TSC2-209ENST00000463601 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
TSC2-209ENST00000463601 GRIN2AQ12879 1464 aa33.99■■■■□ 3.03
TSC2-209ENST00000463601 CEP170Q5SW79 1584 aa33.89■■■■□ 3.02
TSC2-209ENST00000463601 ERICH3Q5RHP9 1530 aa33.89■■■■□ 3.02
TSC2-209ENST00000463601 FHAD1B1AJZ9 1412 aa33.89■■■■□ 3.02
TSC2-209ENST00000463601 NUP160Q12769 1436 aa33.86■■■■□ 3.01
TSC2-209ENST00000463601 ERCC6L2Q5T890 1561 aa33.82■■■■□ 3
TSC2-209ENST00000463601 TRHP20396 242 aaPredicted RBP33.81■■■■□ 3
TSC2-209ENST00000463601 SHROOM2Q13796 1616 aa33.7■■■□□ 2.99
TSC2-209ENST00000463601 IGF1RP08069 1367 aa33.56■■■□□ 2.96
TSC2-209ENST00000463601 KIF27Q86VH2 1401 aa33.55■■■□□ 2.96
TSC2-209ENST00000463601 RUSC2Q8N2Y8 1516 aa33.53■■■□□ 2.96
TSC2-209ENST00000463601 PRG4Q92954 1404 aaPredicted RBP33.52■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms