RNA–Protein interactions for RNA: ENST00000463518.5

NMD3-204, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 5

Gene NMD3, Length 1,077 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-204ENST00000463518 NISCHQ9Y2I1 1504 aa55.78■■■■■ 6.52
NMD3-204ENST00000463518 CCDC180Q9P1Z9 1646 aa49.81■■■■■ 5.56
NMD3-204ENST00000463518 ABCC9O60706 1549 aa49.04■■■■■ 5.44
NMD3-204ENST00000463518 RB1CC1Q8TDY2 1594 aa47.02■■■■■ 5.12
NMD3-204ENST00000463518 NACADO15069 1562 aa46.88■■■■■ 5.1
NMD3-204ENST00000463518 DCAF8L2P0C7V8 631 aa46.66■■■■■ 5.06
NMD3-204ENST00000463518 MYO15BQ96JP2 1530 aa46.48■■■■■ 5.03
NMD3-204ENST00000463518 ZCCHC6Q5VYS8 1495 aaKnown RBP46.38■■■■■ 5.01
NMD3-204ENST00000463518 DCAF1Q9Y4B6 1507 aa46.14■■■■■ 4.98
NMD3-204ENST00000463518 UNC13AQ9UPW8 1703 aa46.11■■■■■ 4.97
NMD3-204ENST00000463518 PABPN1Q86U42 306 aaKnown RBP eCLIP45.74■■■■■ 4.91
NMD3-204ENST00000463518 BICRAQ9NZM4 1560 aa45.69■■■■■ 4.9
NMD3-204ENST00000463518 DNAJC5BQ9UF47 199 aa45.43■■■■■ 4.86
NMD3-204ENST00000463518 SCRIBQ14160 1630 aa45.36■■■■■ 4.85
NMD3-204ENST00000463518 SHROOM4Q9ULL8 1493 aa45.07■■■■■ 4.81
NMD3-204ENST00000463518 EIF4G1Q04637 1599 aaKnown RBP44.46■■■■■ 4.71
NMD3-204ENST00000463518 CC2D2AQ9P2K1 1620 aa44.39■■■■■ 4.7
NMD3-204ENST00000463518 CECR2Q9BXF3 1484 aa44.09■■■■■ 4.65
NMD3-204ENST00000463518 SMARCA4P51532 1647 aa43.38■■■■■ 4.54
NMD3-204ENST00000463518 NCAPD3P42695 1498 aa43.26■■■■■ 4.52
NMD3-204ENST00000463518 BAZ1AQ9NRL2 1556 aaPredicted RBP43.24■■■■■ 4.51
NMD3-204ENST00000463518 ATAD2BQ9ULI0 1458 aa43.22■■■■■ 4.51
NMD3-204ENST00000463518 SMARCA2P51531 1590 aa43.12■■■■■ 4.49
NMD3-204ENST00000463518 HMGXB3Q12766 1538 aa43.01■■■■■ 4.48
NMD3-204ENST00000463518 MROH2BQ7Z745 1585 aa43■■■■■ 4.47
NMD3-204ENST00000463518 PEG3Q9GZU2 1588 aa42.98■■■■■ 4.47
NMD3-204ENST00000463518 BAZ1BQ9UIG0 1483 aaKnown RBP42.81■■■■■ 4.44
NMD3-204ENST00000463518 WIZO95785 1651 aa42.55■■■■■ 4.4
NMD3-204ENST00000463518 NESP48681 1621 aa42.36■■■■■ 4.37
NMD3-204ENST00000463518 RSF1Q96T23 1441 aaPredicted RBP42.34■■■■■ 4.37
NMD3-204ENST00000463518 ERCC6Q03468 1493 aa42.23■■■■■ 4.35
NMD3-204ENST00000463518 LAMC3Q9Y6N6 1575 aa42.18■■■■■ 4.34
NMD3-204ENST00000463518 TOP2AP11388 1531 aaKnown RBP42.01■■■■■ 4.32
NMD3-204ENST00000463518 CUX2O14529 1486 aa41.98■■■■■ 4.31
NMD3-204ENST00000463518 CADPSQ9ULU8 1353 aa41.95■■■■■ 4.31
NMD3-204ENST00000463518 KIF21AQ7Z4S6 1674 aa41.9■■■■■ 4.3
NMD3-204ENST00000463518 PDS5BQ9NTI5 1447 aa41.86■■■■■ 4.29
NMD3-204ENST00000463518 THOC2Q8NI27 1593 aaKnown RBP41.82■■■■■ 4.29
NMD3-204ENST00000463518 CFTRP13569 1480 aa41.64■■■■■ 4.26
NMD3-204ENST00000463518 CCDC88BA6NC98 1476 aa41.53■■■■■ 4.24
NMD3-204ENST00000463518 MRC2Q9UBG0 1479 aa41.47■■■■■ 4.23
NMD3-204ENST00000463518 FANCD2Q9BXW9 1451 aa41.47■■■■■ 4.23
NMD3-204ENST00000463518 CEP164Q9UPV0 1460 aa41.44■■■■■ 4.22
NMD3-204ENST00000463518 PRDM2Q13029 1718 aa41.4■■■■■ 4.22
NMD3-204ENST00000463518 WDR62O43379 1518 aa41.38■■■■■ 4.21
NMD3-204ENST00000463518 DNAJC5Q9H3Z4 198 aa41.18■■■■■ 4.18
NMD3-204ENST00000463518 URB2Q14146 1524 aaKnown RBP41.12■■■■■ 4.17
NMD3-204ENST00000463518 SUPT5HO00267 1087 aaKnown RBP40.9■■■■■ 4.14
NMD3-204ENST00000463518 TOPBP1Q92547 1522 aa40.78■■■■■ 4.12
NMD3-204ENST00000463518 ABCC8Q09428 1581 aa40.74■■■■■ 4.11
NMD3-204ENST00000463518 DNMBPQ6XZF7 1577 aa40.7■■■■■ 4.11
NMD3-204ENST00000463518 IFT140Q96RY7 1462 aa40.58■■■■■ 4.09
NMD3-204ENST00000463518 ZNF608Q9ULD9 1512 aaPredicted RBP40.48■■■■■ 4.07
NMD3-204ENST00000463518 TARBP1Q13395 1621 aaKnown RBP40.42■■■■■ 4.06
NMD3-204ENST00000463518 POLA1P09884 1462 aaPredicted RBP40.4■■■■■ 4.06
NMD3-204ENST00000463518 CUX1P39880 1505 aa40.36■■■■■ 4.05
NMD3-204ENST00000463518 EIF4G3O43432 1585 aaKnown RBP40.31■■■■■ 4.04
NMD3-204ENST00000463518 FGD5Q6ZNL6 1462 aa40.25■■■■■ 4.03
NMD3-204ENST00000463518 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
NMD3-204ENST00000463518 SOGA1O94964 1423 aa40.22■■■■■ 4.03
NMD3-204ENST00000463518 AQRO60306 1485 aaKnown RBP eCLIP40.19■■■■■ 4.025e-8■■■□□ 18
NMD3-204ENST00000463518 OSCARQ8IYS5 282 aa40.16■■■■■ 4.02
NMD3-204ENST00000463518 WDR97A6NE52 1622 aa40.03■■■■■ 4
NMD3-204ENST00000463518 TDRD9Q8NDG6 1382 aaKnown RBP40.03■■■■■ 4
NMD3-204ENST00000463518 BIVM-ERCC5R4GMW8 1640 aa39.94■■■■□ 3.98
NMD3-204ENST00000463518 CHD1O14646 1710 aa39.94■■■■□ 3.98
NMD3-204ENST00000463518 TOP2BQ02880 1626 aa39.91■■■■□ 3.98
NMD3-204ENST00000463518 WRNQ14191 1432 aaPredicted RBP eCLIP39.89■■■■□ 3.98
NMD3-204ENST00000463518 SYNJ1O43426 1573 aa39.89■■■■□ 3.98
NMD3-204ENST00000463518 ABCA10Q8WWZ4 1543 aa39.84■■■■□ 3.97
NMD3-204ENST00000463518 GRIN2BQ13224 1484 aa39.79■■■■□ 3.96
NMD3-204ENST00000463518 SNAPC4Q5SXM2 1469 aa39.79■■■■□ 3.96
NMD3-204ENST00000463518 PBRM1Q86U86 1689 aa39.76■■■■□ 3.96
NMD3-204ENST00000463518 ABCA5Q8WWZ7 1642 aa39.76■■■■□ 3.95
NMD3-204ENST00000463518 GAPVD1Q14C86 1478 aa39.75■■■■□ 3.95
NMD3-204ENST00000463518 MAGI1Q96QZ7 1491 aaPredicted RBP39.73■■■■□ 3.95
NMD3-204ENST00000463518 FBLN2P98095 1184 aa39.7■■■■□ 3.95
NMD3-204ENST00000463518 RIMBP3CA6NJZ7 1639 aa39.63■■■■□ 3.93
NMD3-204ENST00000463518 RIMBP3BA6NNM3 1639 aa39.63■■■■□ 3.93
NMD3-204ENST00000463518 RIMBP3Q9UFD9 1639 aa39.63■■■■□ 3.93
NMD3-204ENST00000463518 SYNJ2O15056 1496 aa39.58■■■■□ 3.93
NMD3-204ENST00000463518 TRIM41Q8WV44 630 aa39.58■■■■□ 3.93
NMD3-204ENST00000463518 CHMP7Q8WUX9 453 aaPredicted RBP39.55■■■■□ 3.92
NMD3-204ENST00000463518 ARHGEF11O15085 1522 aa39.54■■■■□ 3.92
NMD3-204ENST00000463518 CLASP1Q7Z460 1538 aa39.45■■■■□ 3.91
NMD3-204ENST00000463518 ADAMTS12P58397 1594 aa39.38■■■■□ 3.9
NMD3-204ENST00000463518 ERICH3Q5RHP9 1530 aa39.36■■■■□ 3.89
NMD3-204ENST00000463518 GRIN2AQ12879 1464 aa39.29■■■■□ 3.88
NMD3-204ENST00000463518 FHAD1B1AJZ9 1412 aa39.26■■■■□ 3.88
NMD3-204ENST00000463518 ARAP1Q96P48 1450 aa39.2■■■■□ 3.87
NMD3-204ENST00000463518 CYB5RLQ6IPT4 315 aa39.16■■■■□ 3.86
NMD3-204ENST00000463518 CEP170Q5SW79 1584 aa39.15■■■■□ 3.86
NMD3-204ENST00000463518 NUP160Q12769 1436 aa39.14■■■■□ 3.86
NMD3-204ENST00000463518 KIF27Q86VH2 1401 aa39.07■■■■□ 3.85
NMD3-204ENST00000463518 IGF1RP08069 1367 aa39.01■■■■□ 3.84
NMD3-204ENST00000463518 SHROOM2Q13796 1616 aa38.95■■■■□ 3.83
NMD3-204ENST00000463518 CUL7Q14999 1698 aa38.94■■■■□ 3.82
NMD3-204ENST00000463518 ERCC6L2Q5T890 1561 aa38.9■■■■□ 3.82
NMD3-204ENST00000463518 RUSC2Q8N2Y8 1516 aa38.81■■■■□ 3.8
NMD3-204ENST00000463518 CARMIL1Q5VZK9 1371 aa38.75■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 210.8 ms