RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
GPATCH4-204ENST00000463513 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
GPATCH4-204ENST00000463513 ABCC9O60706 1549 aa20.76■□□□□ 0.91
GPATCH4-204ENST00000463513 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
GPATCH4-204ENST00000463513 ZCCHC6Q5VYS8 1495 aaKnown RBP20.07■□□□□ 0.8
GPATCH4-204ENST00000463513 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
GPATCH4-204ENST00000463513 NACADO15069 1562 aa20.04■□□□□ 0.8
GPATCH4-204ENST00000463513 MYO15BQ96JP2 1530 aa19.91■□□□□ 0.78
GPATCH4-204ENST00000463513 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
GPATCH4-204ENST00000463513 UNC13AQ9UPW8 1703 aa19.67■□□□□ 0.74
GPATCH4-204ENST00000463513 SCRIBQ14160 1630 aa19.56■□□□□ 0.72
GPATCH4-204ENST00000463513 BICRAQ9NZM4 1560 aa19.38■□□□□ 0.69
GPATCH4-204ENST00000463513 PABPN1Q86U42 306 aaKnown RBP eCLIP19.36■□□□□ 0.69
GPATCH4-204ENST00000463513 SHROOM4Q9ULL8 1493 aa19.24■□□□□ 0.67
GPATCH4-204ENST00000463513 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
GPATCH4-204ENST00000463513 CC2D2AQ9P2K1 1620 aa18.81■□□□□ 0.6
GPATCH4-204ENST00000463513 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
GPATCH4-204ENST00000463513 SMARCA4P51532 1647 aa18.68■□□□□ 0.58
GPATCH4-204ENST00000463513 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
GPATCH4-204ENST00000463513 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
GPATCH4-204ENST00000463513 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
GPATCH4-204ENST00000463513 MROH2BQ7Z745 1585 aa18.52■□□□□ 0.56
GPATCH4-204ENST00000463513 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
GPATCH4-204ENST00000463513 PEG3Q9GZU2 1588 aa18.45■□□□□ 0.54
GPATCH4-204ENST00000463513 HMGXB3Q12766 1538 aa18.43■□□□□ 0.54
GPATCH4-204ENST00000463513 NCAPD3P42695 1498 aa18.41■□□□□ 0.54
GPATCH4-204ENST00000463513 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
GPATCH4-204ENST00000463513 WIZO95785 1651 aa18.38■□□□□ 0.53
GPATCH4-204ENST00000463513 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
GPATCH4-204ENST00000463513 TOP2AP11388 1531 aaKnown RBP18.2■□□□□ 0.5
GPATCH4-204ENST00000463513 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
GPATCH4-204ENST00000463513 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
GPATCH4-204ENST00000463513 NESP48681 1621 aa17.98■□□□□ 0.47
GPATCH4-204ENST00000463513 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
GPATCH4-204ENST00000463513 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
GPATCH4-204ENST00000463513 PRDM2Q13029 1718 aa17.9■□□□□ 0.46
GPATCH4-204ENST00000463513 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
GPATCH4-204ENST00000463513 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
GPATCH4-204ENST00000463513 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
GPATCH4-204ENST00000463513 CFTRP13569 1480 aa17.83■□□□□ 0.45
GPATCH4-204ENST00000463513 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
GPATCH4-204ENST00000463513 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
GPATCH4-204ENST00000463513 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
GPATCH4-204ENST00000463513 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
GPATCH4-204ENST00000463513 CUX2O14529 1486 aa17.65■□□□□ 0.42
GPATCH4-204ENST00000463513 WDR62O43379 1518 aa17.62■□□□□ 0.41
GPATCH4-204ENST00000463513 URB2Q14146 1524 aaKnown RBP17.54■□□□□ 0.4
GPATCH4-204ENST00000463513 DNMBPQ6XZF7 1577 aa17.51■□□□□ 0.39
GPATCH4-204ENST00000463513 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
GPATCH4-204ENST00000463513 TOPBP1Q92547 1522 aa17.48■□□□□ 0.39
GPATCH4-204ENST00000463513 CUX1P39880 1505 aa17.39■□□□□ 0.37
GPATCH4-204ENST00000463513 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
GPATCH4-204ENST00000463513 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
GPATCH4-204ENST00000463513 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
GPATCH4-204ENST00000463513 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
GPATCH4-204ENST00000463513 WRNQ14191 1432 aaPredicted RBP eCLIP17.33■□□□□ 0.36
GPATCH4-204ENST00000463513 TOP2BQ02880 1626 aa17.31■□□□□ 0.36
GPATCH4-204ENST00000463513 SYNJ1O43426 1573 aa17.31■□□□□ 0.36
GPATCH4-204ENST00000463513 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
GPATCH4-204ENST00000463513 EIF4G3O43432 1585 aaKnown RBP17.26■□□□□ 0.35
GPATCH4-204ENST00000463513 SOGA1O94964 1423 aa17.24■□□□□ 0.35
GPATCH4-204ENST00000463513 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
GPATCH4-204ENST00000463513 WDR97A6NE52 1622 aa17.23■□□□□ 0.35
GPATCH4-204ENST00000463513 ZNF608Q9ULD9 1512 aaPredicted RBP17.22■□□□□ 0.35
GPATCH4-204ENST00000463513 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
GPATCH4-204ENST00000463513 PBRM1Q86U86 1689 aa17.14■□□□□ 0.33
GPATCH4-204ENST00000463513 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.332e-7■■■■■ 31.6
GPATCH4-204ENST00000463513 ABCA5Q8WWZ7 1642 aa17.12■□□□□ 0.33
GPATCH4-204ENST00000463513 TDRD9Q8NDG6 1382 aaKnown RBP17.12■□□□□ 0.33
GPATCH4-204ENST00000463513 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
GPATCH4-204ENST00000463513 GRIN2BQ13224 1484 aa17.06■□□□□ 0.32
GPATCH4-204ENST00000463513 CHD1O14646 1710 aa17.04■□□□□ 0.32
GPATCH4-204ENST00000463513 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
GPATCH4-204ENST00000463513 MAGI1Q96QZ7 1491 aaPredicted RBP17.02■□□□□ 0.32
GPATCH4-204ENST00000463513 TRIM41Q8WV44 630 aa17■□□□□ 0.31
GPATCH4-204ENST00000463513 KIF27Q86VH2 1401 aa16.97■□□□□ 0.31
GPATCH4-204ENST00000463513 ERICH3Q5RHP9 1530 aa16.97■□□□□ 0.31
GPATCH4-204ENST00000463513 ADAMTS12P58397 1594 aa16.96■□□□□ 0.31
GPATCH4-204ENST00000463513 FBLN2P98095 1184 aa16.95■□□□□ 0.3
GPATCH4-204ENST00000463513 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
GPATCH4-204ENST00000463513 CUL7Q14999 1698 aa16.91■□□□□ 0.3
GPATCH4-204ENST00000463513 CHMP7Q8WUX9 453 aaPredicted RBP16.9■□□□□ 0.3
GPATCH4-204ENST00000463513 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
GPATCH4-204ENST00000463513 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
GPATCH4-204ENST00000463513 GRIN2AQ12879 1464 aa16.85■□□□□ 0.29
GPATCH4-204ENST00000463513 DNAJC5Q9H3Z4 198 aa16.84■□□□□ 0.29
GPATCH4-204ENST00000463513 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
GPATCH4-204ENST00000463513 IGF1RP08069 1367 aa16.79■□□□□ 0.28
GPATCH4-204ENST00000463513 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
GPATCH4-204ENST00000463513 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.28
GPATCH4-204ENST00000463513 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
GPATCH4-204ENST00000463513 CARMIL1Q5VZK9 1371 aa16.75■□□□□ 0.27
GPATCH4-204ENST00000463513 EEA1Q15075 1411 aa16.74■□□□□ 0.27
GPATCH4-204ENST00000463513 NUP160Q12769 1436 aa16.72■□□□□ 0.27
GPATCH4-204ENST00000463513 RAPGEF2Q9Y4G8 1499 aa16.7■□□□□ 0.26
GPATCH4-204ENST00000463513 RIMBP3CA6NJZ7 1639 aa16.7■□□□□ 0.26
GPATCH4-204ENST00000463513 RIMBP3BA6NNM3 1639 aa16.7■□□□□ 0.26
GPATCH4-204ENST00000463513 RIMBP3Q9UFD9 1639 aa16.7■□□□□ 0.26
GPATCH4-204ENST00000463513 ARHGEF11O15085 1522 aa16.68■□□□□ 0.26
GPATCH4-204ENST00000463513 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 205.2 ms