RNA–Protein interactions for RNA: ENST00000463421.1

NFX1-204, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 3

Gene NFX1, Length 987 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-204ENST00000463421 NISCHQ9Y2I1 1504 aa37.36■■■■□ 3.57
NFX1-204ENST00000463421 ABCC9O60706 1549 aa33.74■■■□□ 2.99
NFX1-204ENST00000463421 CCDC180Q9P1Z9 1646 aa33.71■■■□□ 2.99
NFX1-204ENST00000463421 RB1CC1Q8TDY2 1594 aa32.11■■■□□ 2.73
NFX1-204ENST00000463421 NACADO15069 1562 aa31.83■■■□□ 2.69
NFX1-204ENST00000463421 DNAJC5BQ9UF47 199 aa31.7■■■□□ 2.67
NFX1-204ENST00000463421 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
NFX1-204ENST00000463421 UNC13AQ9UPW8 1703 aa31.49■■■□□ 2.63
NFX1-204ENST00000463421 PABPN1Q86U42 306 aaKnown RBP eCLIP31.33■■■□□ 2.61
NFX1-204ENST00000463421 MYO15BQ96JP2 1530 aa31.32■■■□□ 2.6
NFX1-204ENST00000463421 BICRAQ9NZM4 1560 aa31.16■■■□□ 2.58
NFX1-204ENST00000463421 ZCCHC6Q5VYS8 1495 aaKnown RBP30.95■■■□□ 2.54
NFX1-204ENST00000463421 DCAF1Q9Y4B6 1507 aa30.87■■■□□ 2.53
NFX1-204ENST00000463421 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
NFX1-204ENST00000463421 SCRIBQ14160 1630 aa30.65■■■□□ 2.5
NFX1-204ENST00000463421 CC2D2AQ9P2K1 1620 aa30.52■■■□□ 2.48
NFX1-204ENST00000463421 EIF4G1Q04637 1599 aaKnown RBP30.41■■■□□ 2.46
NFX1-204ENST00000463421 CECR2Q9BXF3 1484 aa30.41■■■□□ 2.46
NFX1-204ENST00000463421 NCAPD3P42695 1498 aa29.33■■■□□ 2.29
NFX1-204ENST00000463421 DNAJC5Q9H3Z4 198 aa29.24■■■□□ 2.27
NFX1-204ENST00000463421 SMARCA4P51532 1647 aa29.23■■■□□ 2.27
NFX1-204ENST00000463421 ATAD2BQ9ULI0 1458 aa29.23■■■□□ 2.27
NFX1-204ENST00000463421 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
NFX1-204ENST00000463421 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
NFX1-204ENST00000463421 HMGXB3Q12766 1538 aa29.16■■■□□ 2.26
NFX1-204ENST00000463421 CUX2O14529 1486 aa29.16■■■□□ 2.26
NFX1-204ENST00000463421 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
NFX1-204ENST00000463421 BAZ1BQ9UIG0 1483 aaKnown RBP28.97■■■□□ 2.23
NFX1-204ENST00000463421 NESP48681 1621 aa28.94■■■□□ 2.22
NFX1-204ENST00000463421 PEG3Q9GZU2 1588 aa28.92■■■□□ 2.22
NFX1-204ENST00000463421 MROH2BQ7Z745 1585 aa28.79■■■□□ 2.2
NFX1-204ENST00000463421 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
NFX1-204ENST00000463421 THOC2Q8NI27 1593 aaKnown RBP28.75■■■□□ 2.19
NFX1-204ENST00000463421 KIF21AQ7Z4S6 1674 aa28.67■■■□□ 2.18
NFX1-204ENST00000463421 PDS5BQ9NTI5 1447 aa28.55■■■□□ 2.16
NFX1-204ENST00000463421 WIZO95785 1651 aa28.49■■■□□ 2.15
NFX1-204ENST00000463421 CADPSQ9ULU8 1353 aa28.42■■■□□ 2.14
NFX1-204ENST00000463421 MRC2Q9UBG0 1479 aa28.34■■■□□ 2.13
NFX1-204ENST00000463421 WDR62O43379 1518 aa28.29■■■□□ 2.12
NFX1-204ENST00000463421 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
NFX1-204ENST00000463421 FANCD2Q9BXW9 1451 aa28.14■■■□□ 2.09
NFX1-204ENST00000463421 TOP2AP11388 1531 aaKnown RBP28.1■■■□□ 2.09
NFX1-204ENST00000463421 RSF1Q96T23 1441 aaPredicted RBP28.09■■■□□ 2.09
NFX1-204ENST00000463421 CFTRP13569 1480 aa28.08■■■□□ 2.09
NFX1-204ENST00000463421 PRDM2Q13029 1718 aa27.99■■■□□ 2.07
NFX1-204ENST00000463421 TRIM41Q8WV44 630 aa27.92■■■□□ 2.06
NFX1-204ENST00000463421 URB2Q14146 1524 aaKnown RBP27.92■■■□□ 2.06
NFX1-204ENST00000463421 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
NFX1-204ENST00000463421 CCDC88BA6NC98 1476 aa27.73■■■□□ 2.03
NFX1-204ENST00000463421 IFT140Q96RY7 1462 aa27.63■■■□□ 2.01
NFX1-204ENST00000463421 TOPBP1Q92547 1522 aa27.59■■■□□ 2.01
NFX1-204ENST00000463421 ZNF608Q9ULD9 1512 aaPredicted RBP27.58■■■□□ 2.01
NFX1-204ENST00000463421 ABCC8Q09428 1581 aa27.54■■■□□ 2
NFX1-204ENST00000463421 DNMBPQ6XZF7 1577 aa27.52■■■□□ 2
NFX1-204ENST00000463421 RIMBP3CA6NJZ7 1639 aa27.51■■□□□ 1.99
NFX1-204ENST00000463421 RIMBP3BA6NNM3 1639 aa27.51■■□□□ 1.99
NFX1-204ENST00000463421 RIMBP3Q9UFD9 1639 aa27.51■■□□□ 1.99
NFX1-204ENST00000463421 EIF4G3O43432 1585 aaKnown RBP27.51■■□□□ 1.99
NFX1-204ENST00000463421 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
NFX1-204ENST00000463421 CHD1O14646 1710 aa27.38■■□□□ 1.97
NFX1-204ENST00000463421 ARHGEF11O15085 1522 aa27.36■■□□□ 1.97
NFX1-204ENST00000463421 AQRO60306 1485 aaKnown RBP eCLIP27.3■■□□□ 1.96
NFX1-204ENST00000463421 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
NFX1-204ENST00000463421 RAD54L2Q9Y4B4 1467 aa27.18■■□□□ 1.94
NFX1-204ENST00000463421 FBLN2P98095 1184 aa27.14■■□□□ 1.94
NFX1-204ENST00000463421 WDR97A6NE52 1622 aa27.14■■□□□ 1.94
NFX1-204ENST00000463421 SOGA1O94964 1423 aa27.14■■□□□ 1.93
NFX1-204ENST00000463421 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
NFX1-204ENST00000463421 CYB5RLQ6IPT4 315 aa27.1■■□□□ 1.93
NFX1-204ENST00000463421 TDRD9Q8NDG6 1382 aaKnown RBP27.09■■□□□ 1.93
NFX1-204ENST00000463421 ARAP1Q96P48 1450 aa27.07■■□□□ 1.92
NFX1-204ENST00000463421 CUX1P39880 1505 aa27.07■■□□□ 1.92
NFX1-204ENST00000463421 SNAPC4Q5SXM2 1469 aa27.06■■□□□ 1.92
NFX1-204ENST00000463421 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
NFX1-204ENST00000463421 CLASP1Q7Z460 1538 aa26.98■■□□□ 1.91
NFX1-204ENST00000463421 SYNJ1O43426 1573 aa26.97■■□□□ 1.91
NFX1-204ENST00000463421 PBRM1Q86U86 1689 aa26.96■■□□□ 1.91
NFX1-204ENST00000463421 GRIN2BQ13224 1484 aa26.95■■□□□ 1.91
NFX1-204ENST00000463421 CHMP7Q8WUX9 453 aaPredicted RBP26.91■■□□□ 1.9
NFX1-204ENST00000463421 SYNJ2O15056 1496 aa26.89■■□□□ 1.9
NFX1-204ENST00000463421 TRHP20396 242 aaPredicted RBP26.88■■□□□ 1.89
NFX1-204ENST00000463421 GAPVD1Q14C86 1478 aa26.84■■□□□ 1.89
NFX1-204ENST00000463421 ABCA5Q8WWZ7 1642 aa26.82■■□□□ 1.88
NFX1-204ENST00000463421 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
NFX1-204ENST00000463421 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
NFX1-204ENST00000463421 BIVM-ERCC5R4GMW8 1640 aa26.66■■□□□ 1.86
NFX1-204ENST00000463421 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
NFX1-204ENST00000463421 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
NFX1-204ENST00000463421 TOP2BQ02880 1626 aa26.62■■□□□ 1.85
NFX1-204ENST00000463421 GRIN2AQ12879 1464 aa26.62■■□□□ 1.85
NFX1-204ENST00000463421 CEP170Q5SW79 1584 aa26.55■■□□□ 1.84
NFX1-204ENST00000463421 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
NFX1-204ENST00000463421 NUP160Q12769 1436 aa26.51■■□□□ 1.83
NFX1-204ENST00000463421 SHROOM2Q13796 1616 aa26.48■■□□□ 1.83
NFX1-204ENST00000463421 FHAD1B1AJZ9 1412 aa26.48■■□□□ 1.83
NFX1-204ENST00000463421 ERICH3Q5RHP9 1530 aa26.47■■□□□ 1.83
NFX1-204ENST00000463421 RUSC2Q8N2Y8 1516 aa26.27■■□□□ 1.8
NFX1-204ENST00000463421 KIF13AQ9H1H9 1805 aa26.26■■□□□ 1.79
NFX1-204ENST00000463421 PRG4Q92954 1404 aaPredicted RBP26.26■■□□□ 1.79
NFX1-204ENST00000463421 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms