RNA–Protein interactions for RNA: ENST00000463415.1

LCOR-206, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

TSL 3

Gene LCOR, Length 271 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-206ENST00000463415 NISCHQ9Y2I1 1504 aa10.08□□□□□ -0.8
LCOR-206ENST00000463415 ABCC9O60706 1549 aa9.25□□□□□ -0.93
LCOR-206ENST00000463415 CCDC180Q9P1Z9 1646 aa9.12□□□□□ -0.95
LCOR-206ENST00000463415 RB1CC1Q8TDY2 1594 aa8.7□□□□□ -1.02
LCOR-206ENST00000463415 DNAJC5BQ9UF47 199 aa8.7□□□□□ -1.02
LCOR-206ENST00000463415 UNC13AQ9UPW8 1703 aa8.59□□□□□ -1.03
LCOR-206ENST00000463415 NACADO15069 1562 aa8.58□□□□□ -1.04
LCOR-206ENST00000463415 PABPN1Q86U42 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
LCOR-206ENST00000463415 DCAF8L2P0C7V8 631 aa8.53□□□□□ -1.04
LCOR-206ENST00000463415 BICRAQ9NZM4 1560 aa8.5□□□□□ -1.05
LCOR-206ENST00000463415 SCRIBQ14160 1630 aa8.39□□□□□ -1.07
LCOR-206ENST00000463415 MYO15BQ96JP2 1530 aa8.39□□□□□ -1.07
LCOR-206ENST00000463415 ZCCHC6Q5VYS8 1495 aaKnown RBP8.37□□□□□ -1.07
LCOR-206ENST00000463415 CC2D2AQ9P2K1 1620 aa8.34□□□□□ -1.07
LCOR-206ENST00000463415 CECR2Q9BXF3 1484 aa8.3□□□□□ -1.08
LCOR-206ENST00000463415 EIF4G1Q04637 1599 aaKnown RBP8.29□□□□□ -1.08
LCOR-206ENST00000463415 SHROOM4Q9ULL8 1493 aa8.27□□□□□ -1.09
LCOR-206ENST00000463415 DCAF1Q9Y4B6 1507 aa8.27□□□□□ -1.09
LCOR-206ENST00000463415 DNAJC5Q9H3Z4 198 aa7.98□□□□□ -1.13
LCOR-206ENST00000463415 ERCC6Q03468 1493 aa7.96□□□□□ -1.13
LCOR-206ENST00000463415 CUX2O14529 1486 aa7.94□□□□□ -1.14
LCOR-206ENST00000463415 NESP48681 1621 aa7.93□□□□□ -1.14
LCOR-206ENST00000463415 SMARCA4P51532 1647 aa7.93□□□□□ -1.14
LCOR-206ENST00000463415 ATAD2BQ9ULI0 1458 aa7.92□□□□□ -1.14
LCOR-206ENST00000463415 HMGXB3Q12766 1538 aa7.9□□□□□ -1.14
LCOR-206ENST00000463415 NCAPD3P42695 1498 aa7.9□□□□□ -1.14
LCOR-206ENST00000463415 THOC2Q8NI27 1593 aaKnown RBP7.88□□□□□ -1.15
LCOR-206ENST00000463415 SMARCA2P51531 1590 aa7.88□□□□□ -1.15
LCOR-206ENST00000463415 BAZ1BQ9UIG0 1483 aaKnown RBP7.86□□□□□ -1.15
LCOR-206ENST00000463415 KIF21AQ7Z4S6 1674 aa7.85□□□□□ -1.15
LCOR-206ENST00000463415 BAZ1AQ9NRL2 1556 aaPredicted RBP7.84□□□□□ -1.15
LCOR-206ENST00000463415 MROH2BQ7Z745 1585 aa7.81□□□□□ -1.16
LCOR-206ENST00000463415 PEG3Q9GZU2 1588 aa7.8□□□□□ -1.16
LCOR-206ENST00000463415 LAMC3Q9Y6N6 1575 aa7.79□□□□□ -1.16
LCOR-206ENST00000463415 WIZO95785 1651 aa7.75□□□□□ -1.17
LCOR-206ENST00000463415 MRC2Q9UBG0 1479 aa7.71□□□□□ -1.18
LCOR-206ENST00000463415 PDS5BQ9NTI5 1447 aa7.7□□□□□ -1.18
LCOR-206ENST00000463415 WDR62O43379 1518 aa7.7□□□□□ -1.18
LCOR-206ENST00000463415 TRIM41Q8WV44 630 aa7.69□□□□□ -1.18
LCOR-206ENST00000463415 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
LCOR-206ENST00000463415 CEP164Q9UPV0 1460 aa7.66□□□□□ -1.18
LCOR-206ENST00000463415 FANCD2Q9BXW9 1451 aa7.63□□□□□ -1.19
LCOR-206ENST00000463415 TOP2AP11388 1531 aaKnown RBP7.61□□□□□ -1.19
LCOR-206ENST00000463415 URB2Q14146 1524 aaKnown RBP7.61□□□□□ -1.19
LCOR-206ENST00000463415 CFTRP13569 1480 aa7.58□□□□□ -1.2
LCOR-206ENST00000463415 PRDM2Q13029 1718 aa7.58□□□□□ -1.2
LCOR-206ENST00000463415 RSF1Q96T23 1441 aaPredicted RBP7.56□□□□□ -1.2
LCOR-206ENST00000463415 RIMBP3CA6NJZ7 1639 aa7.56□□□□□ -1.2
LCOR-206ENST00000463415 RIMBP3BA6NNM3 1639 aa7.56□□□□□ -1.2
LCOR-206ENST00000463415 RIMBP3Q9UFD9 1639 aa7.56□□□□□ -1.2
LCOR-206ENST00000463415 ZNF608Q9ULD9 1512 aaPredicted RBP7.54□□□□□ -1.2
LCOR-206ENST00000463415 EIF4G3O43432 1585 aaKnown RBP7.53□□□□□ -1.2
LCOR-206ENST00000463415 CHD1O14646 1710 aa7.49□□□□□ -1.21
LCOR-206ENST00000463415 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
LCOR-206ENST00000463415 ARHGEF11O15085 1522 aa7.49□□□□□ -1.21
LCOR-206ENST00000463415 TOPBP1Q92547 1522 aa7.49□□□□□ -1.21
LCOR-206ENST00000463415 OSCARQ8IYS5 282 aa7.48□□□□□ -1.21
LCOR-206ENST00000463415 IFT140Q96RY7 1462 aa7.48□□□□□ -1.21
LCOR-206ENST00000463415 DNMBPQ6XZF7 1577 aa7.46□□□□□ -1.21
LCOR-206ENST00000463415 TARBP1Q13395 1621 aaKnown RBP7.44□□□□□ -1.22
LCOR-206ENST00000463415 ARAP1Q96P48 1450 aa7.43□□□□□ -1.22
LCOR-206ENST00000463415 AQRO60306 1485 aaKnown RBP eCLIP7.43□□□□□ -1.22
LCOR-206ENST00000463415 POLA1P09884 1462 aaPredicted RBP7.42□□□□□ -1.22
LCOR-206ENST00000463415 RAD54L2Q9Y4B4 1467 aa7.41□□□□□ -1.22
LCOR-206ENST00000463415 SNAPC4Q5SXM2 1469 aa7.39□□□□□ -1.23
LCOR-206ENST00000463415 FBLN2P98095 1184 aa7.37□□□□□ -1.23
LCOR-206ENST00000463415 CYB5RLQ6IPT4 315 aa7.37□□□□□ -1.23
LCOR-206ENST00000463415 WDR97A6NE52 1622 aa7.37□□□□□ -1.23
LCOR-206ENST00000463415 CLASP1Q7Z460 1538 aa7.37□□□□□ -1.23
LCOR-206ENST00000463415 FGD5Q6ZNL6 1462 aa7.36□□□□□ -1.23
LCOR-206ENST00000463415 ABCC8Q09428 1581 aa7.36□□□□□ -1.23
LCOR-206ENST00000463415 TDRD9Q8NDG6 1382 aaKnown RBP7.35□□□□□ -1.23
LCOR-206ENST00000463415 PBRM1Q86U86 1689 aa7.35□□□□□ -1.23
LCOR-206ENST00000463415 CUX1P39880 1505 aa7.35□□□□□ -1.23
LCOR-206ENST00000463415 TRHP20396 242 aaPredicted RBP7.34□□□□□ -1.23
LCOR-206ENST00000463415 SOGA1O94964 1423 aa7.33□□□□□ -1.24
LCOR-206ENST00000463415 SYNJ1O43426 1573 aa7.33□□□□□ -1.24
LCOR-206ENST00000463415 ERCC6L2Q5T890 1561 aa7.29□□□□□ -1.24
LCOR-206ENST00000463415 ABCA5Q8WWZ7 1642 aa7.29□□□□□ -1.24
LCOR-206ENST00000463415 GRIN2BQ13224 1484 aa7.29□□□□□ -1.24
LCOR-206ENST00000463415 MAGI1Q96QZ7 1491 aaPredicted RBP7.29□□□□□ -1.24
LCOR-206ENST00000463415 SYNJ2O15056 1496 aa7.28□□□□□ -1.24
LCOR-206ENST00000463415 ADAMTS12P58397 1594 aa7.26□□□□□ -1.25
LCOR-206ENST00000463415 GAPVD1Q14C86 1478 aa7.25□□□□□ -1.25
LCOR-206ENST00000463415 AEBP2Q6ZN18 517 aaPredicted RBP7.25□□□□□ -1.25
LCOR-206ENST00000463415 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
LCOR-206ENST00000463415 CEP170Q5SW79 1584 aa7.25□□□□□ -1.25
LCOR-206ENST00000463415 ABCA10Q8WWZ4 1543 aa7.23□□□□□ -1.25
LCOR-206ENST00000463415 GRIN2AQ12879 1464 aa7.22□□□□□ -1.25
LCOR-206ENST00000463415 BIVM-ERCC5R4GMW8 1640 aa7.21□□□□□ -1.26
LCOR-206ENST00000463415 SHROOM2Q13796 1616 aa7.19□□□□□ -1.26
LCOR-206ENST00000463415 TOP2BQ02880 1626 aa7.19□□□□□ -1.26
LCOR-206ENST00000463415 SUPT5HO00267 1087 aaKnown RBP7.18□□□□□ -1.26
LCOR-206ENST00000463415 NUP160Q12769 1436 aa7.18□□□□□ -1.26
LCOR-206ENST00000463415 KIF13AQ9H1H9 1805 aa7.17□□□□□ -1.26
LCOR-206ENST00000463415 RUSC2Q8N2Y8 1516 aa7.17□□□□□ -1.26
LCOR-206ENST00000463415 WRNQ14191 1432 aaPredicted RBP eCLIP7.15□□□□□ -1.27
LCOR-206ENST00000463415 FHAD1B1AJZ9 1412 aa7.14□□□□□ -1.27
LCOR-206ENST00000463415 ERICH3Q5RHP9 1530 aa7.14□□□□□ -1.27
LCOR-206ENST00000463415 PRG4Q92954 1404 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms