RNA–Protein interactions for RNA: ENST00000463250.1

ZIC4-204, Transcript of Zic family member 4, humanhuman

TSL 4

Gene ZIC4, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-204ENST00000463250 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
ZIC4-204ENST00000463250 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
ZIC4-204ENST00000463250 ABCC9O60706 1549 aa25.76■■□□□ 1.71
ZIC4-204ENST00000463250 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
ZIC4-204ENST00000463250 NACADO15069 1562 aa24.56■■□□□ 1.52
ZIC4-204ENST00000463250 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
ZIC4-204ENST00000463250 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
ZIC4-204ENST00000463250 ZCCHC6Q5VYS8 1495 aaKnown RBP24.16■■□□□ 1.46
ZIC4-204ENST00000463250 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
ZIC4-204ENST00000463250 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
ZIC4-204ENST00000463250 DNAJC5BQ9UF47 199 aa24.02■■□□□ 1.44
ZIC4-204ENST00000463250 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
ZIC4-204ENST00000463250 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
ZIC4-204ENST00000463250 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
ZIC4-204ENST00000463250 SCRIBQ14160 1630 aa23.64■■□□□ 1.38
ZIC4-204ENST00000463250 EIF4G1Q04637 1599 aaKnown RBP23.31■■□□□ 1.32
ZIC4-204ENST00000463250 CC2D2AQ9P2K1 1620 aa23.28■■□□□ 1.32
ZIC4-204ENST00000463250 CECR2Q9BXF3 1484 aa23.22■■□□□ 1.31
ZIC4-204ENST00000463250 NCAPD3P42695 1498 aa22.71■■□□□ 1.23
ZIC4-204ENST00000463250 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
ZIC4-204ENST00000463250 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
ZIC4-204ENST00000463250 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
ZIC4-204ENST00000463250 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
ZIC4-204ENST00000463250 HMGXB3Q12766 1538 aa22.52■■□□□ 1.19
ZIC4-204ENST00000463250 PEG3Q9GZU2 1588 aa22.45■■□□□ 1.18
ZIC4-204ENST00000463250 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
ZIC4-204ENST00000463250 BAZ1BQ9UIG0 1483 aaKnown RBP22.4■■□□□ 1.18
ZIC4-204ENST00000463250 ERCC6Q03468 1493 aa22.23■■□□□ 1.15
ZIC4-204ENST00000463250 NESP48681 1621 aa22.19■■□□□ 1.14
ZIC4-204ENST00000463250 CUX2O14529 1486 aa22.17■■□□□ 1.14
ZIC4-204ENST00000463250 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
ZIC4-204ENST00000463250 WIZO95785 1651 aa22.11■■□□□ 1.13
ZIC4-204ENST00000463250 RSF1Q96T23 1441 aaPredicted RBP22.06■■□□□ 1.12
ZIC4-204ENST00000463250 CADPSQ9ULU8 1353 aa22.01■■□□□ 1.11
ZIC4-204ENST00000463250 PDS5BQ9NTI5 1447 aa22.01■■□□□ 1.11
ZIC4-204ENST00000463250 DNAJC5Q9H3Z4 198 aa21.94■■□□□ 1.1
ZIC4-204ENST00000463250 THOC2Q8NI27 1593 aaKnown RBP21.91■■□□□ 1.1
ZIC4-204ENST00000463250 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
ZIC4-204ENST00000463250 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
ZIC4-204ENST00000463250 CFTRP13569 1480 aa21.8■■□□□ 1.08
ZIC4-204ENST00000463250 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
ZIC4-204ENST00000463250 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
ZIC4-204ENST00000463250 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
ZIC4-204ENST00000463250 WDR62O43379 1518 aa21.7■■□□□ 1.07
ZIC4-204ENST00000463250 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
ZIC4-204ENST00000463250 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
ZIC4-204ENST00000463250 PRDM2Q13029 1718 aa21.49■■□□□ 1.03
ZIC4-204ENST00000463250 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
ZIC4-204ENST00000463250 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
ZIC4-204ENST00000463250 IFT140Q96RY7 1462 aa21.31■■□□□ 1
ZIC4-204ENST00000463250 DNMBPQ6XZF7 1577 aa21.27■□□□□ 0.99
ZIC4-204ENST00000463250 OSCARQ8IYS5 282 aa21.22■□□□□ 0.99
ZIC4-204ENST00000463250 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
ZIC4-204ENST00000463250 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
ZIC4-204ENST00000463250 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
ZIC4-204ENST00000463250 TARBP1Q13395 1621 aaKnown RBP21.11■□□□□ 0.97
ZIC4-204ENST00000463250 EIF4G3O43432 1585 aaKnown RBP21.07■□□□□ 0.96
ZIC4-204ENST00000463250 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
ZIC4-204ENST00000463250 SOGA1O94964 1423 aa21.06■□□□□ 0.96
ZIC4-204ENST00000463250 RAD54L2Q9Y4B4 1467 aa21.03■□□□□ 0.96
ZIC4-204ENST00000463250 CUX1P39880 1505 aa21.03■□□□□ 0.96
ZIC4-204ENST00000463250 FGD5Q6ZNL6 1462 aa21.01■□□□□ 0.95
ZIC4-204ENST00000463250 TRIM41Q8WV44 630 aa20.98■□□□□ 0.95
ZIC4-204ENST00000463250 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
ZIC4-204ENST00000463250 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
ZIC4-204ENST00000463250 FBLN2P98095 1184 aa20.87■□□□□ 0.93
ZIC4-204ENST00000463250 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
ZIC4-204ENST00000463250 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
ZIC4-204ENST00000463250 CHD1O14646 1710 aa20.84■□□□□ 0.93
ZIC4-204ENST00000463250 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
ZIC4-204ENST00000463250 ABCA10Q8WWZ4 1543 aa20.83■□□□□ 0.92
ZIC4-204ENST00000463250 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
ZIC4-204ENST00000463250 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
ZIC4-204ENST00000463250 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
ZIC4-204ENST00000463250 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
ZIC4-204ENST00000463250 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
ZIC4-204ENST00000463250 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
ZIC4-204ENST00000463250 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
ZIC4-204ENST00000463250 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
ZIC4-204ENST00000463250 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
ZIC4-204ENST00000463250 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
ZIC4-204ENST00000463250 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
ZIC4-204ENST00000463250 SYNJ1O43426 1573 aa20.71■□□□□ 0.91
ZIC4-204ENST00000463250 PBRM1Q86U86 1689 aa20.69■□□□□ 0.9
ZIC4-204ENST00000463250 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
ZIC4-204ENST00000463250 CYB5RLQ6IPT4 315 aa20.67■□□□□ 0.9
ZIC4-204ENST00000463250 ARAP1Q96P48 1450 aa20.62■□□□□ 0.89
ZIC4-204ENST00000463250 ERICH3Q5RHP9 1530 aa20.57■□□□□ 0.88
ZIC4-204ENST00000463250 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
ZIC4-204ENST00000463250 FHAD1B1AJZ9 1412 aa20.56■□□□□ 0.88
ZIC4-204ENST00000463250 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
ZIC4-204ENST00000463250 NUP160Q12769 1436 aa20.52■□□□□ 0.87
ZIC4-204ENST00000463250 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
ZIC4-204ENST00000463250 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
ZIC4-204ENST00000463250 IGF1RP08069 1367 aa20.38■□□□□ 0.85
ZIC4-204ENST00000463250 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
ZIC4-204ENST00000463250 ERCC6L2Q5T890 1561 aa20.34■□□□□ 0.85
ZIC4-204ENST00000463250 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
ZIC4-204ENST00000463250 JPH4Q96JJ6 628 aa20.32■□□□□ 0.84
ZIC4-204ENST00000463250 PRG4Q92954 1404 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms