RNA–Protein interactions for RNA: ENST00000463177.1

CNTNAP4-203, Transcript of contactin associated protein like 4, humanhuman

TSL 1 (best)

Gene CNTNAP4, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-203ENST00000463177 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
CNTNAP4-203ENST00000463177 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
CNTNAP4-203ENST00000463177 ABCC9O60706 1549 aa20.51■□□□□ 0.87
CNTNAP4-203ENST00000463177 DCAF8L2P0C7V8 631 aa19.64■□□□□ 0.73
CNTNAP4-203ENST00000463177 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
CNTNAP4-203ENST00000463177 NACADO15069 1562 aa19.42■□□□□ 0.7
CNTNAP4-203ENST00000463177 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
CNTNAP4-203ENST00000463177 DNAJC5BQ9UF47 199 aa19.19■□□□□ 0.66
CNTNAP4-203ENST00000463177 MYO15BQ96JP2 1530 aa19.14■□□□□ 0.65
CNTNAP4-203ENST00000463177 ZCCHC6Q5VYS8 1495 aaKnown RBP19.1■□□□□ 0.65
CNTNAP4-203ENST00000463177 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
CNTNAP4-203ENST00000463177 BICRAQ9NZM4 1560 aa19.01■□□□□ 0.63
CNTNAP4-203ENST00000463177 DCAF1Q9Y4B6 1507 aa18.95■□□□□ 0.62
CNTNAP4-203ENST00000463177 SHROOM4Q9ULL8 1493 aa18.75■□□□□ 0.59
CNTNAP4-203ENST00000463177 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
CNTNAP4-203ENST00000463177 CC2D2AQ9P2K1 1620 aa18.59■□□□□ 0.57
CNTNAP4-203ENST00000463177 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
CNTNAP4-203ENST00000463177 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
CNTNAP4-203ENST00000463177 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
CNTNAP4-203ENST00000463177 SMARCA4P51532 1647 aa17.87■□□□□ 0.45
CNTNAP4-203ENST00000463177 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
CNTNAP4-203ENST00000463177 SMARCA2P51531 1590 aa17.83■□□□□ 0.44
CNTNAP4-203ENST00000463177 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
CNTNAP4-203ENST00000463177 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
CNTNAP4-203ENST00000463177 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
CNTNAP4-203ENST00000463177 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
CNTNAP4-203ENST00000463177 CUX2O14529 1486 aa17.71■□□□□ 0.43
CNTNAP4-203ENST00000463177 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
CNTNAP4-203ENST00000463177 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
CNTNAP4-203ENST00000463177 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
CNTNAP4-203ENST00000463177 NESP48681 1621 aa17.62■□□□□ 0.41
CNTNAP4-203ENST00000463177 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
CNTNAP4-203ENST00000463177 LAMC3Q9Y6N6 1575 aa17.55■□□□□ 0.4
CNTNAP4-203ENST00000463177 THOC2Q8NI27 1593 aaKnown RBP17.53■□□□□ 0.4
CNTNAP4-203ENST00000463177 WIZO95785 1651 aa17.52■□□□□ 0.39
CNTNAP4-203ENST00000463177 KIF21AQ7Z4S6 1674 aa17.52■□□□□ 0.39
CNTNAP4-203ENST00000463177 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
CNTNAP4-203ENST00000463177 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
CNTNAP4-203ENST00000463177 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
CNTNAP4-203ENST00000463177 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
CNTNAP4-203ENST00000463177 MRC2Q9UBG0 1479 aa17.25■□□□□ 0.35
CNTNAP4-203ENST00000463177 WDR62O43379 1518 aa17.25■□□□□ 0.35
CNTNAP4-203ENST00000463177 CCDC88BA6NC98 1476 aa17.21■□□□□ 0.35
CNTNAP4-203ENST00000463177 CFTRP13569 1480 aa17.19■□□□□ 0.34
CNTNAP4-203ENST00000463177 CEP164Q9UPV0 1460 aa17.19■□□□□ 0.34
CNTNAP4-203ENST00000463177 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
CNTNAP4-203ENST00000463177 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
CNTNAP4-203ENST00000463177 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
CNTNAP4-203ENST00000463177 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
CNTNAP4-203ENST00000463177 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
CNTNAP4-203ENST00000463177 OSCARQ8IYS5 282 aa16.83■□□□□ 0.28
CNTNAP4-203ENST00000463177 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
CNTNAP4-203ENST00000463177 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
CNTNAP4-203ENST00000463177 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
CNTNAP4-203ENST00000463177 ZNF608Q9ULD9 1512 aaPredicted RBP16.8■□□□□ 0.28
CNTNAP4-203ENST00000463177 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
CNTNAP4-203ENST00000463177 RIMBP3CA6NJZ7 1639 aa16.74■□□□□ 0.27
CNTNAP4-203ENST00000463177 RIMBP3BA6NNM3 1639 aa16.74■□□□□ 0.27
CNTNAP4-203ENST00000463177 TARBP1Q13395 1621 aaKnown RBP16.74■□□□□ 0.27
CNTNAP4-203ENST00000463177 RIMBP3Q9UFD9 1639 aa16.74■□□□□ 0.27
CNTNAP4-203ENST00000463177 CHD1O14646 1710 aa16.73■□□□□ 0.27
CNTNAP4-203ENST00000463177 SOGA1O94964 1423 aa16.71■□□□□ 0.27
CNTNAP4-203ENST00000463177 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
CNTNAP4-203ENST00000463177 RAD54L2Q9Y4B4 1467 aa16.68■□□□□ 0.26
CNTNAP4-203ENST00000463177 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
CNTNAP4-203ENST00000463177 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
CNTNAP4-203ENST00000463177 CUX1P39880 1505 aa16.65■□□□□ 0.26
CNTNAP4-203ENST00000463177 FBLN2P98095 1184 aa16.65■□□□□ 0.26
CNTNAP4-203ENST00000463177 FGD5Q6ZNL6 1462 aa16.64■□□□□ 0.25
CNTNAP4-203ENST00000463177 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
CNTNAP4-203ENST00000463177 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
CNTNAP4-203ENST00000463177 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
CNTNAP4-203ENST00000463177 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
CNTNAP4-203ENST00000463177 PBRM1Q86U86 1689 aa16.5■□□□□ 0.23
CNTNAP4-203ENST00000463177 SNAPC4Q5SXM2 1469 aa16.49■□□□□ 0.23
CNTNAP4-203ENST00000463177 GRIN2BQ13224 1484 aa16.47■□□□□ 0.23
CNTNAP4-203ENST00000463177 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
CNTNAP4-203ENST00000463177 ARAP1Q96P48 1450 aa16.46■□□□□ 0.23
CNTNAP4-203ENST00000463177 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
CNTNAP4-203ENST00000463177 CLASP1Q7Z460 1538 aa16.45■□□□□ 0.22
CNTNAP4-203ENST00000463177 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
CNTNAP4-203ENST00000463177 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
CNTNAP4-203ENST00000463177 CYB5RLQ6IPT4 315 aa16.43■□□□□ 0.22
CNTNAP4-203ENST00000463177 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
CNTNAP4-203ENST00000463177 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
CNTNAP4-203ENST00000463177 SYNJ2O15056 1496 aa16.39■□□□□ 0.21
CNTNAP4-203ENST00000463177 BIVM-ERCC5R4GMW8 1640 aa16.35■□□□□ 0.21
CNTNAP4-203ENST00000463177 ADAMTS12P58397 1594 aa16.27■□□□□ 0.2
CNTNAP4-203ENST00000463177 FHAD1B1AJZ9 1412 aa16.27■□□□□ 0.19
CNTNAP4-203ENST00000463177 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
CNTNAP4-203ENST00000463177 KIF27Q86VH2 1401 aa16.25■□□□□ 0.19
CNTNAP4-203ENST00000463177 IGF1RP08069 1367 aa16.24■□□□□ 0.19
CNTNAP4-203ENST00000463177 GRIN2AQ12879 1464 aa16.23■□□□□ 0.19
CNTNAP4-203ENST00000463177 ERICH3Q5RHP9 1530 aa16.21■□□□□ 0.19
CNTNAP4-203ENST00000463177 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
CNTNAP4-203ENST00000463177 SHROOM2Q13796 1616 aa16.18■□□□□ 0.18
CNTNAP4-203ENST00000463177 ERCC6L2Q5T890 1561 aa16.17■□□□□ 0.18
CNTNAP4-203ENST00000463177 NUP160Q12769 1436 aa16.17■□□□□ 0.18
CNTNAP4-203ENST00000463177 JPH4Q96JJ6 628 aa16.15■□□□□ 0.18
CNTNAP4-203ENST00000463177 CARMIL1Q5VZK9 1371 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms