RNA–Protein interactions for RNA: ENST00000463151.5

KDM4A-202, Transcript of lysine demethylase 4A, humanhuman

TSL 5

Gene KDM4A, Length 1,023 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-202ENST00000463151 NISCHQ9Y2I1 1504 aa46.71■■■■■ 5.07
KDM4A-202ENST00000463151 CCDC180Q9P1Z9 1646 aa41.55■■■■■ 4.24
KDM4A-202ENST00000463151 ABCC9O60706 1549 aa40.72■■■■■ 4.11
KDM4A-202ENST00000463151 RB1CC1Q8TDY2 1594 aa39.12■■■■□ 3.85
KDM4A-202ENST00000463151 NACADO15069 1562 aa39.07■■■■□ 3.84
KDM4A-202ENST00000463151 DCAF8L2P0C7V8 631 aa38.98■■■■□ 3.83
KDM4A-202ENST00000463151 ZCCHC6Q5VYS8 1495 aaKnown RBP38.91■■■■□ 3.82
KDM4A-202ENST00000463151 MYO15BQ96JP2 1530 aa38.82■■■■□ 3.8
KDM4A-202ENST00000463151 DCAF1Q9Y4B6 1507 aa38.64■■■■□ 3.78
KDM4A-202ENST00000463151 UNC13AQ9UPW8 1703 aa38.27■■■■□ 3.72
KDM4A-202ENST00000463151 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.68
KDM4A-202ENST00000463151 BICRAQ9NZM4 1560 aa38.01■■■■□ 3.67
KDM4A-202ENST00000463151 SCRIBQ14160 1630 aa37.92■■■■□ 3.66
KDM4A-202ENST00000463151 SHROOM4Q9ULL8 1493 aa37.54■■■■□ 3.6
KDM4A-202ENST00000463151 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
KDM4A-202ENST00000463151 EIF4G1Q04637 1599 aaKnown RBP36.97■■■■□ 3.51
KDM4A-202ENST00000463151 CC2D2AQ9P2K1 1620 aa36.84■■■■□ 3.49
KDM4A-202ENST00000463151 CECR2Q9BXF3 1484 aa36.58■■■■□ 3.45
KDM4A-202ENST00000463151 SMARCA4P51532 1647 aa36.26■■■■□ 3.4
KDM4A-202ENST00000463151 BAZ1AQ9NRL2 1556 aaPredicted RBP36.19■■■■□ 3.38
KDM4A-202ENST00000463151 ATAD2BQ9ULI0 1458 aa36.07■■■■□ 3.37
KDM4A-202ENST00000463151 NCAPD3P42695 1498 aa36.05■■■■□ 3.36
KDM4A-202ENST00000463151 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
KDM4A-202ENST00000463151 SMARCA2P51531 1590 aa36.01■■■■□ 3.35
KDM4A-202ENST00000463151 PEG3Q9GZU2 1588 aa35.91■■■■□ 3.34
KDM4A-202ENST00000463151 HMGXB3Q12766 1538 aa35.88■■■■□ 3.33
KDM4A-202ENST00000463151 BAZ1BQ9UIG0 1483 aaKnown RBP35.75■■■■□ 3.31
KDM4A-202ENST00000463151 WIZO95785 1651 aa35.62■■■■□ 3.29
KDM4A-202ENST00000463151 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.28
KDM4A-202ENST00000463151 NESP48681 1621 aa35.24■■■■□ 3.23
KDM4A-202ENST00000463151 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
KDM4A-202ENST00000463151 LAMC3Q9Y6N6 1575 aa35.11■■■■□ 3.21
KDM4A-202ENST00000463151 ERCC6Q03468 1493 aa35.06■■■■□ 3.2
KDM4A-202ENST00000463151 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
KDM4A-202ENST00000463151 PDS5BQ9NTI5 1447 aa34.85■■■■□ 3.17
KDM4A-202ENST00000463151 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
KDM4A-202ENST00000463151 KIF21AQ7Z4S6 1674 aa34.82■■■■□ 3.16
KDM4A-202ENST00000463151 CFTRP13569 1480 aa34.78■■■■□ 3.16
KDM4A-202ENST00000463151 CUX2O14529 1486 aa34.73■■■■□ 3.15
KDM4A-202ENST00000463151 THOC2Q8NI27 1593 aaKnown RBP34.73■■■■□ 3.15
KDM4A-202ENST00000463151 FANCD2Q9BXW9 1451 aa34.6■■■■□ 3.13
KDM4A-202ENST00000463151 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
KDM4A-202ENST00000463151 CEP164Q9UPV0 1460 aa34.56■■■■□ 3.12
KDM4A-202ENST00000463151 MRC2Q9UBG0 1479 aa34.52■■■■□ 3.12
KDM4A-202ENST00000463151 PRDM2Q13029 1718 aa34.51■■■■□ 3.12
KDM4A-202ENST00000463151 WDR62O43379 1518 aa34.43■■■■□ 3.1
KDM4A-202ENST00000463151 URB2Q14146 1524 aaKnown RBP34.29■■■■□ 3.08
KDM4A-202ENST00000463151 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
KDM4A-202ENST00000463151 DNMBPQ6XZF7 1577 aa34.01■■■■□ 3.03
KDM4A-202ENST00000463151 ABCC8Q09428 1581 aa34■■■■□ 3.03
KDM4A-202ENST00000463151 IFT140Q96RY7 1462 aa33.83■■■■□ 3.01
KDM4A-202ENST00000463151 CUX1P39880 1505 aa33.79■■■■□ 3
KDM4A-202ENST00000463151 POLA1P09884 1462 aaPredicted RBP33.76■■■■□ 3
KDM4A-202ENST00000463151 DNAJC5Q9H3Z4 198 aa33.74■■■□□ 2.99
KDM4A-202ENST00000463151 ZNF608Q9ULD9 1512 aaPredicted RBP33.73■■■□□ 2.99
KDM4A-202ENST00000463151 TARBP1Q13395 1621 aaKnown RBP33.71■■■□□ 2.99
KDM4A-202ENST00000463151 FGD5Q6ZNL6 1462 aa33.67■■■□□ 2.98
KDM4A-202ENST00000463151 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
KDM4A-202ENST00000463151 SOGA1O94964 1423 aa33.6■■■□□ 2.97
KDM4A-202ENST00000463151 EIF4G3O43432 1585 aaKnown RBP33.59■■■□□ 2.97
KDM4A-202ENST00000463151 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
KDM4A-202ENST00000463151 AQRO60306 1485 aaKnown RBP eCLIP33.5■■■□□ 2.95
KDM4A-202ENST00000463151 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
KDM4A-202ENST00000463151 BIVM-ERCC5R4GMW8 1640 aa33.48■■■□□ 2.95
KDM4A-202ENST00000463151 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
KDM4A-202ENST00000463151 TDRD9Q8NDG6 1382 aaKnown RBP33.43■■■□□ 2.94
KDM4A-202ENST00000463151 WDR97A6NE52 1622 aa33.42■■■□□ 2.94
KDM4A-202ENST00000463151 ABCA10Q8WWZ4 1543 aa33.33■■■□□ 2.93
KDM4A-202ENST00000463151 OSCARQ8IYS5 282 aa33.25■■■□□ 2.91
KDM4A-202ENST00000463151 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
KDM4A-202ENST00000463151 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
KDM4A-202ENST00000463151 GAPVD1Q14C86 1478 aa33.21■■■□□ 2.91
KDM4A-202ENST00000463151 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
KDM4A-202ENST00000463151 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
KDM4A-202ENST00000463151 CHD1O14646 1710 aa33.16■■■□□ 2.9
KDM4A-202ENST00000463151 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
KDM4A-202ENST00000463151 FBLN2P98095 1184 aa33.06■■■□□ 2.88
KDM4A-202ENST00000463151 SYNJ2O15056 1496 aa33.01■■■□□ 2.88
KDM4A-202ENST00000463151 CHMP7Q8WUX9 453 aaPredicted RBP32.96■■■□□ 2.87
KDM4A-202ENST00000463151 ERICH3Q5RHP9 1530 aa32.92■■■□□ 2.86
KDM4A-202ENST00000463151 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
KDM4A-202ENST00000463151 FHAD1B1AJZ9 1412 aa32.83■■■□□ 2.85
KDM4A-202ENST00000463151 CLASP1Q7Z460 1538 aa32.82■■■□□ 2.85
KDM4A-202ENST00000463151 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
KDM4A-202ENST00000463151 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
KDM4A-202ENST00000463151 RIMBP3CA6NJZ7 1639 aa32.79■■■□□ 2.84
KDM4A-202ENST00000463151 RIMBP3BA6NNM3 1639 aa32.79■■■□□ 2.84
KDM4A-202ENST00000463151 RIMBP3Q9UFD9 1639 aa32.79■■■□□ 2.84
KDM4A-202ENST00000463151 ARHGEF11O15085 1522 aa32.77■■■□□ 2.84
KDM4A-202ENST00000463151 IGF1RP08069 1367 aa32.7■■■□□ 2.83
KDM4A-202ENST00000463151 CEP170Q5SW79 1584 aa32.67■■■□□ 2.82
KDM4A-202ENST00000463151 NUP160Q12769 1436 aa32.67■■■□□ 2.82
KDM4A-202ENST00000463151 TRIM41Q8WV44 630 aa32.63■■■□□ 2.81
KDM4A-202ENST00000463151 CUL7Q14999 1698 aa32.62■■■□□ 2.81
KDM4A-202ENST00000463151 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
KDM4A-202ENST00000463151 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
KDM4A-202ENST00000463151 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
KDM4A-202ENST00000463151 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
KDM4A-202ENST00000463151 CYB5RLQ6IPT4 315 aa32.42■■■□□ 2.78
KDM4A-202ENST00000463151 ERCC6L2Q5T890 1561 aa32.39■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms