RNA–Protein interactions for RNA: ENST00000463077.5

COMMD2-201, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-201ENST00000463077 NISCHQ9Y2I1 1504 aa51.6■■■■■ 5.85
COMMD2-201ENST00000463077 ABCC9O60706 1549 aa46.89■■■■■ 5.1
COMMD2-201ENST00000463077 CCDC180Q9P1Z9 1646 aa46.45■■■■■ 5.03
COMMD2-201ENST00000463077 DNAJC5BQ9UF47 199 aa44.54■■■■■ 4.72
COMMD2-201ENST00000463077 RB1CC1Q8TDY2 1594 aa44.44■■■■■ 4.71
COMMD2-201ENST00000463077 NACADO15069 1562 aa44.07■■■■■ 4.65
COMMD2-201ENST00000463077 DCAF8L2P0C7V8 631 aa43.66■■■■■ 4.58
COMMD2-201ENST00000463077 PABPN1Q86U42 306 aaKnown RBP eCLIP43.62■■■■■ 4.57
COMMD2-201ENST00000463077 UNC13AQ9UPW8 1703 aa43.4■■■■■ 4.54
COMMD2-201ENST00000463077 MYO15BQ96JP2 1530 aa43.39■■■■■ 4.54
COMMD2-201ENST00000463077 BICRAQ9NZM4 1560 aa43.22■■■■■ 4.51
COMMD2-201ENST00000463077 ZCCHC6Q5VYS8 1495 aaKnown RBP42.65■■■■■ 4.42
COMMD2-201ENST00000463077 DCAF1Q9Y4B6 1507 aa42.64■■■■■ 4.42
COMMD2-201ENST00000463077 SHROOM4Q9ULL8 1493 aa42.61■■■■■ 4.41
COMMD2-201ENST00000463077 CC2D2AQ9P2K1 1620 aa42.35■■■■■ 4.37
COMMD2-201ENST00000463077 CECR2Q9BXF3 1484 aa42.31■■■■■ 4.36
COMMD2-201ENST00000463077 SCRIBQ14160 1630 aa42.22■■■■■ 4.35
COMMD2-201ENST00000463077 EIF4G1Q04637 1599 aaKnown RBP42.15■■■■■ 4.34
COMMD2-201ENST00000463077 DNAJC5Q9H3Z4 198 aa41.24■■■■■ 4.19
COMMD2-201ENST00000463077 NCAPD3P42695 1498 aa40.76■■■■■ 4.12
COMMD2-201ENST00000463077 CUX2O14529 1486 aa40.65■■■■■ 4.1
COMMD2-201ENST00000463077 ATAD2BQ9ULI0 1458 aa40.51■■■■■ 4.08
COMMD2-201ENST00000463077 ERCC6Q03468 1493 aa40.47■■■■■ 4.07
COMMD2-201ENST00000463077 SMARCA2P51531 1590 aa40.34■■■■■ 4.05
COMMD2-201ENST00000463077 HMGXB3Q12766 1538 aa40.33■■■■■ 4.05
COMMD2-201ENST00000463077 SMARCA4P51532 1647 aa40.3■■■■■ 4.04
COMMD2-201ENST00000463077 NESP48681 1621 aa40.17■■■■■ 4.02
COMMD2-201ENST00000463077 BAZ1AQ9NRL2 1556 aaPredicted RBP40.05■■■■■ 4
COMMD2-201ENST00000463077 BAZ1BQ9UIG0 1483 aaKnown RBP40.03■■■■■ 4
COMMD2-201ENST00000463077 PEG3Q9GZU2 1588 aa39.99■■■■□ 3.99
COMMD2-201ENST00000463077 THOC2Q8NI27 1593 aaKnown RBP39.84■■■■□ 3.97
COMMD2-201ENST00000463077 LAMC3Q9Y6N6 1575 aa39.83■■■■□ 3.97
COMMD2-201ENST00000463077 MROH2BQ7Z745 1585 aa39.74■■■■□ 3.95
COMMD2-201ENST00000463077 PDS5BQ9NTI5 1447 aa39.63■■■■□ 3.93
COMMD2-201ENST00000463077 KIF21AQ7Z4S6 1674 aa39.57■■■■□ 3.93
COMMD2-201ENST00000463077 CADPSQ9ULU8 1353 aa39.46■■■■□ 3.91
COMMD2-201ENST00000463077 MRC2Q9UBG0 1479 aa39.29■■■■□ 3.88
COMMD2-201ENST00000463077 WDR62O43379 1518 aa39.22■■■■□ 3.87
COMMD2-201ENST00000463077 WIZO95785 1651 aa39.19■■■■□ 3.86
COMMD2-201ENST00000463077 TRIM41Q8WV44 630 aa39.08■■■■□ 3.85
COMMD2-201ENST00000463077 CEP164Q9UPV0 1460 aa39.02■■■■□ 3.84
COMMD2-201ENST00000463077 FANCD2Q9BXW9 1451 aa38.96■■■■□ 3.83
COMMD2-201ENST00000463077 CFTRP13569 1480 aa38.92■■■■□ 3.82
COMMD2-201ENST00000463077 RSF1Q96T23 1441 aaPredicted RBP38.78■■■■□ 3.8
COMMD2-201ENST00000463077 OSCARQ8IYS5 282 aa38.76■■■■□ 3.8
COMMD2-201ENST00000463077 TOP2AP11388 1531 aaKnown RBP38.68■■■■□ 3.78
COMMD2-201ENST00000463077 URB2Q14146 1524 aaKnown RBP38.68■■■■□ 3.78
COMMD2-201ENST00000463077 PRDM2Q13029 1718 aa38.35■■■■□ 3.73
COMMD2-201ENST00000463077 IFT140Q96RY7 1462 aa38.3■■■■□ 3.72
COMMD2-201ENST00000463077 CCDC88BA6NC98 1476 aa38.29■■■■□ 3.72
COMMD2-201ENST00000463077 ZNF608Q9ULD9 1512 aaPredicted RBP38.28■■■■□ 3.72
COMMD2-201ENST00000463077 RIMBP3CA6NJZ7 1639 aa38.22■■■■□ 3.71
COMMD2-201ENST00000463077 RIMBP3BA6NNM3 1639 aa38.22■■■■□ 3.71
COMMD2-201ENST00000463077 RIMBP3Q9UFD9 1639 aa38.22■■■■□ 3.71
COMMD2-201ENST00000463077 TOPBP1Q92547 1522 aa38.17■■■■□ 3.7
COMMD2-201ENST00000463077 ABCC8Q09428 1581 aa38.1■■■■□ 3.69
COMMD2-201ENST00000463077 ARHGEF11O15085 1522 aa38.07■■■■□ 3.69
COMMD2-201ENST00000463077 EIF4G3O43432 1585 aaKnown RBP37.97■■■■□ 3.67
COMMD2-201ENST00000463077 DNMBPQ6XZF7 1577 aa37.97■■■■□ 3.67
COMMD2-201ENST00000463077 TARBP1Q13395 1621 aaKnown RBP37.88■■■■□ 3.65
COMMD2-201ENST00000463077 AQRO60306 1485 aaKnown RBP eCLIP37.88■■■■□ 3.65
COMMD2-201ENST00000463077 CYB5RLQ6IPT4 315 aa37.84■■■■□ 3.65
COMMD2-201ENST00000463077 CHD1O14646 1710 aa37.76■■■■□ 3.64
COMMD2-201ENST00000463077 POLA1P09884 1462 aaPredicted RBP37.76■■■■□ 3.63
COMMD2-201ENST00000463077 ARAP1Q96P48 1450 aa37.68■■■■□ 3.62
COMMD2-201ENST00000463077 FBLN2P98095 1184 aa37.66■■■■□ 3.62
COMMD2-201ENST00000463077 RAD54L2Q9Y4B4 1467 aa37.62■■■■□ 3.61
COMMD2-201ENST00000463077 SOGA1O94964 1423 aa37.6■■■■□ 3.61
COMMD2-201ENST00000463077 TDRD9Q8NDG6 1382 aaKnown RBP37.57■■■■□ 3.61
COMMD2-201ENST00000463077 TRHP20396 242 aaPredicted RBP37.51■■■■□ 3.6
COMMD2-201ENST00000463077 WDR97A6NE52 1622 aa37.47■■■■□ 3.59
COMMD2-201ENST00000463077 SNAPC4Q5SXM2 1469 aa37.44■■■■□ 3.58
COMMD2-201ENST00000463077 FGD5Q6ZNL6 1462 aa37.44■■■■□ 3.58
COMMD2-201ENST00000463077 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
COMMD2-201ENST00000463077 CHMP7Q8WUX9 453 aaPredicted RBP37.36■■■■□ 3.57
COMMD2-201ENST00000463077 MAGI1Q96QZ7 1491 aaPredicted RBP37.36■■■■□ 3.57
COMMD2-201ENST00000463077 CUX1P39880 1505 aa37.35■■■■□ 3.57
COMMD2-201ENST00000463077 GRIN2BQ13224 1484 aa37.31■■■■□ 3.56
COMMD2-201ENST00000463077 SYNJ1O43426 1573 aa37.29■■■■□ 3.56
COMMD2-201ENST00000463077 SYNJ2O15056 1496 aa37.24■■■■□ 3.55
COMMD2-201ENST00000463077 GAPVD1Q14C86 1478 aa37.11■■■■□ 3.53
COMMD2-201ENST00000463077 PBRM1Q86U86 1689 aa37.03■■■■□ 3.52
COMMD2-201ENST00000463077 ABCA10Q8WWZ4 1543 aa37.03■■■■□ 3.52
COMMD2-201ENST00000463077 ABCA5Q8WWZ7 1642 aa36.97■■■■□ 3.51
COMMD2-201ENST00000463077 SUPT5HO00267 1087 aaKnown RBP36.88■■■■□ 3.49
COMMD2-201ENST00000463077 GRIN2AQ12879 1464 aa36.82■■■■□ 3.49
COMMD2-201ENST00000463077 WRNQ14191 1432 aaPredicted RBP eCLIP36.77■■■■□ 3.48
COMMD2-201ENST00000463077 ERCC6L2Q5T890 1561 aa36.77■■■■□ 3.48
COMMD2-201ENST00000463077 NUP160Q12769 1436 aa36.76■■■■□ 3.48
COMMD2-201ENST00000463077 AEBP2Q6ZN18 517 aaPredicted RBP36.74■■■■□ 3.47
COMMD2-201ENST00000463077 ADAMTS12P58397 1594 aa36.7■■■■□ 3.47
COMMD2-201ENST00000463077 CEP170Q5SW79 1584 aa36.7■■■■□ 3.46
COMMD2-201ENST00000463077 FHAD1B1AJZ9 1412 aa36.64■■■■□ 3.46
COMMD2-201ENST00000463077 TOP2BQ02880 1626 aa36.62■■■■□ 3.45
COMMD2-201ENST00000463077 SHROOM2Q13796 1616 aa36.62■■■■□ 3.45
COMMD2-201ENST00000463077 BIVM-ERCC5R4GMW8 1640 aa36.6■■■■□ 3.45
COMMD2-201ENST00000463077 ERICH3Q5RHP9 1530 aa36.54■■■■□ 3.44
COMMD2-201ENST00000463077 PRG4Q92954 1404 aaPredicted RBP36.41■■■■□ 3.42
COMMD2-201ENST00000463077 JPH4Q96JJ6 628 aa36.4■■■■□ 3.42
COMMD2-201ENST00000463077 KIF13AQ9H1H9 1805 aa36.34■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms