RNA–Protein interactions for RNA: ENST00000463068.1

TM4SF4-202, Transcript of transmembrane 4 L six family member 4, humanhuman

TSL 2

Gene TM4SF4, Length 456 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4-202ENST00000463068 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
TM4SF4-202ENST00000463068 CCDC180Q9P1Z9 1646 aa29.68■■■□□ 2.34
TM4SF4-202ENST00000463068 ABCC9O60706 1549 aa29.1■■■□□ 2.25
TM4SF4-202ENST00000463068 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
TM4SF4-202ENST00000463068 NACADO15069 1562 aa27.88■■■□□ 2.05
TM4SF4-202ENST00000463068 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
TM4SF4-202ENST00000463068 ZCCHC6Q5VYS8 1495 aaKnown RBP27.74■■■□□ 2.03
TM4SF4-202ENST00000463068 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
TM4SF4-202ENST00000463068 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
TM4SF4-202ENST00000463068 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.99
TM4SF4-202ENST00000463068 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
TM4SF4-202ENST00000463068 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
TM4SF4-202ENST00000463068 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
TM4SF4-202ENST00000463068 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
TM4SF4-202ENST00000463068 SHROOM4Q9ULL8 1493 aa26.78■■□□□ 1.88
TM4SF4-202ENST00000463068 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
TM4SF4-202ENST00000463068 CC2D2AQ9P2K1 1620 aa26.36■■□□□ 1.81
TM4SF4-202ENST00000463068 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
TM4SF4-202ENST00000463068 SMARCA4P51532 1647 aa25.89■■□□□ 1.74
TM4SF4-202ENST00000463068 BAZ1AQ9NRL2 1556 aaPredicted RBP25.8■■□□□ 1.72
TM4SF4-202ENST00000463068 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
TM4SF4-202ENST00000463068 NCAPD3P42695 1498 aa25.74■■□□□ 1.71
TM4SF4-202ENST00000463068 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
TM4SF4-202ENST00000463068 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
TM4SF4-202ENST00000463068 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
TM4SF4-202ENST00000463068 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
TM4SF4-202ENST00000463068 BAZ1BQ9UIG0 1483 aaKnown RBP25.49■■□□□ 1.67
TM4SF4-202ENST00000463068 WIZO95785 1651 aa25.44■■□□□ 1.66
TM4SF4-202ENST00000463068 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
TM4SF4-202ENST00000463068 NESP48681 1621 aa25.2■■□□□ 1.62
TM4SF4-202ENST00000463068 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
TM4SF4-202ENST00000463068 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
TM4SF4-202ENST00000463068 ERCC6Q03468 1493 aa25.02■■□□□ 1.6
TM4SF4-202ENST00000463068 CADPSQ9ULU8 1353 aa24.96■■□□□ 1.59
TM4SF4-202ENST00000463068 KIF21AQ7Z4S6 1674 aa24.93■■□□□ 1.58
TM4SF4-202ENST00000463068 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
TM4SF4-202ENST00000463068 THOC2Q8NI27 1593 aaKnown RBP24.85■■□□□ 1.57
TM4SF4-202ENST00000463068 CUX2O14529 1486 aa24.83■■□□□ 1.57
TM4SF4-202ENST00000463068 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.56
TM4SF4-202ENST00000463068 CFTRP13569 1480 aa24.82■■□□□ 1.56
TM4SF4-202ENST00000463068 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
TM4SF4-202ENST00000463068 PRDM2Q13029 1718 aa24.69■■□□□ 1.54
TM4SF4-202ENST00000463068 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
TM4SF4-202ENST00000463068 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.54
TM4SF4-202ENST00000463068 WDR62O43379 1518 aa24.61■■□□□ 1.53
TM4SF4-202ENST00000463068 SUPT5HO00267 1087 aaKnown RBP24.54■■□□□ 1.52
TM4SF4-202ENST00000463068 URB2Q14146 1524 aaKnown RBP24.5■■□□□ 1.51
TM4SF4-202ENST00000463068 TOPBP1Q92547 1522 aa24.3■■□□□ 1.48
TM4SF4-202ENST00000463068 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
TM4SF4-202ENST00000463068 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
TM4SF4-202ENST00000463068 DNAJC5Q9H3Z4 198 aa24.2■■□□□ 1.46
TM4SF4-202ENST00000463068 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
TM4SF4-202ENST00000463068 CUX1P39880 1505 aa24.11■■□□□ 1.45
TM4SF4-202ENST00000463068 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
TM4SF4-202ENST00000463068 TARBP1Q13395 1621 aaKnown RBP24.1■■□□□ 1.45
TM4SF4-202ENST00000463068 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
TM4SF4-202ENST00000463068 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
TM4SF4-202ENST00000463068 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
TM4SF4-202ENST00000463068 EIF4G3O43432 1585 aaKnown RBP23.99■■□□□ 1.43
TM4SF4-202ENST00000463068 SOGA1O94964 1423 aa23.95■■□□□ 1.42
TM4SF4-202ENST00000463068 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.42
TM4SF4-202ENST00000463068 WDR97A6NE52 1622 aa23.89■■□□□ 1.42
TM4SF4-202ENST00000463068 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
TM4SF4-202ENST00000463068 SYNJ1O43426 1573 aa23.88■■□□□ 1.41
TM4SF4-202ENST00000463068 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
TM4SF4-202ENST00000463068 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
TM4SF4-202ENST00000463068 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
TM4SF4-202ENST00000463068 ABCA10Q8WWZ4 1543 aa23.77■■□□□ 1.4
TM4SF4-202ENST00000463068 CHD1O14646 1710 aa23.75■■□□□ 1.39
TM4SF4-202ENST00000463068 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
TM4SF4-202ENST00000463068 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
TM4SF4-202ENST00000463068 PBRM1Q86U86 1689 aa23.71■■□□□ 1.39
TM4SF4-202ENST00000463068 SNAPC4Q5SXM2 1469 aa23.69■■□□□ 1.38
TM4SF4-202ENST00000463068 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
TM4SF4-202ENST00000463068 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
TM4SF4-202ENST00000463068 MAGI1Q96QZ7 1491 aaPredicted RBP23.63■■□□□ 1.37
TM4SF4-202ENST00000463068 FBLN2P98095 1184 aa23.56■■□□□ 1.36
TM4SF4-202ENST00000463068 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
TM4SF4-202ENST00000463068 ADAMTS12P58397 1594 aa23.49■■□□□ 1.35
TM4SF4-202ENST00000463068 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
TM4SF4-202ENST00000463068 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
TM4SF4-202ENST00000463068 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
TM4SF4-202ENST00000463068 CHMP7Q8WUX9 453 aaPredicted RBP23.48■■□□□ 1.35
TM4SF4-202ENST00000463068 ERICH3Q5RHP9 1530 aa23.48■■□□□ 1.35
TM4SF4-202ENST00000463068 CLASP1Q7Z460 1538 aa23.47■■□□□ 1.35
TM4SF4-202ENST00000463068 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
TM4SF4-202ENST00000463068 GRIN2AQ12879 1464 aa23.4■■□□□ 1.34
TM4SF4-202ENST00000463068 FHAD1B1AJZ9 1412 aa23.4■■□□□ 1.34
TM4SF4-202ENST00000463068 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
TM4SF4-202ENST00000463068 KIF27Q86VH2 1401 aa23.33■■□□□ 1.33
TM4SF4-202ENST00000463068 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
TM4SF4-202ENST00000463068 NUP160Q12769 1436 aa23.32■■□□□ 1.32
TM4SF4-202ENST00000463068 IGF1RP08069 1367 aa23.3■■□□□ 1.32
TM4SF4-202ENST00000463068 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
TM4SF4-202ENST00000463068 CUL7Q14999 1698 aa23.25■■□□□ 1.31
TM4SF4-202ENST00000463068 RUSC2Q8N2Y8 1516 aa23.21■■□□□ 1.31
TM4SF4-202ENST00000463068 SHROOM2Q13796 1616 aa23.19■■□□□ 1.3
TM4SF4-202ENST00000463068 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
TM4SF4-202ENST00000463068 CYB5RLQ6IPT4 315 aa23.16■■□□□ 1.3
TM4SF4-202ENST00000463068 CARMIL1Q5VZK9 1371 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms