RNA–Protein interactions for RNA: ENST00000462880.1

SNAPIN-202, Transcript of SNAP associated protein, humanhuman

TSL 2

Gene SNAPIN, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPIN-202ENST00000462880 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
SNAPIN-202ENST00000462880 ABCC9O60706 1549 aa31.05■■■□□ 2.56
SNAPIN-202ENST00000462880 CCDC180Q9P1Z9 1646 aa30.63■■■□□ 2.49
SNAPIN-202ENST00000462880 DNAJC5BQ9UF47 199 aa29.44■■■□□ 2.3
SNAPIN-202ENST00000462880 RB1CC1Q8TDY2 1594 aa29.28■■■□□ 2.28
SNAPIN-202ENST00000462880 NACADO15069 1562 aa29.01■■■□□ 2.24
SNAPIN-202ENST00000462880 DCAF8L2P0C7V8 631 aa28.99■■■□□ 2.23
SNAPIN-202ENST00000462880 PABPN1Q86U42 306 aaKnown RBP eCLIP28.92■■■□□ 2.22
SNAPIN-202ENST00000462880 UNC13AQ9UPW8 1703 aa28.76■■■□□ 2.19
SNAPIN-202ENST00000462880 BICRAQ9NZM4 1560 aa28.6■■■□□ 2.17
SNAPIN-202ENST00000462880 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
SNAPIN-202ENST00000462880 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
SNAPIN-202ENST00000462880 SCRIBQ14160 1630 aa28.07■■■□□ 2.08
SNAPIN-202ENST00000462880 DCAF1Q9Y4B6 1507 aa28.07■■■□□ 2.08
SNAPIN-202ENST00000462880 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
SNAPIN-202ENST00000462880 CECR2Q9BXF3 1484 aa27.93■■■□□ 2.06
SNAPIN-202ENST00000462880 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
SNAPIN-202ENST00000462880 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
SNAPIN-202ENST00000462880 DNAJC5Q9H3Z4 198 aa27■■□□□ 1.91
SNAPIN-202ENST00000462880 NCAPD3P42695 1498 aa26.83■■□□□ 1.89
SNAPIN-202ENST00000462880 ATAD2BQ9ULI0 1458 aa26.79■■□□□ 1.88
SNAPIN-202ENST00000462880 ERCC6Q03468 1493 aa26.71■■□□□ 1.87
SNAPIN-202ENST00000462880 SMARCA4P51532 1647 aa26.69■■□□□ 1.86
SNAPIN-202ENST00000462880 CUX2O14529 1486 aa26.68■■□□□ 1.86
SNAPIN-202ENST00000462880 NESP48681 1621 aa26.66■■□□□ 1.86
SNAPIN-202ENST00000462880 HMGXB3Q12766 1538 aa26.59■■□□□ 1.85
SNAPIN-202ENST00000462880 SMARCA2P51531 1590 aa26.58■■□□□ 1.85
SNAPIN-202ENST00000462880 BAZ1BQ9UIG0 1483 aaKnown RBP26.47■■□□□ 1.83
SNAPIN-202ENST00000462880 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.82
SNAPIN-202ENST00000462880 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
SNAPIN-202ENST00000462880 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
SNAPIN-202ENST00000462880 THOC2Q8NI27 1593 aaKnown RBP26.34■■□□□ 1.81
SNAPIN-202ENST00000462880 KIF21AQ7Z4S6 1674 aa26.24■■□□□ 1.79
SNAPIN-202ENST00000462880 LAMC3Q9Y6N6 1575 aa26.22■■□□□ 1.79
SNAPIN-202ENST00000462880 PDS5BQ9NTI5 1447 aa26.07■■□□□ 1.76
SNAPIN-202ENST00000462880 WIZO95785 1651 aa26.07■■□□□ 1.76
SNAPIN-202ENST00000462880 CADPSQ9ULU8 1353 aa26.02■■□□□ 1.76
SNAPIN-202ENST00000462880 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
SNAPIN-202ENST00000462880 WDR62O43379 1518 aa25.88■■□□□ 1.73
SNAPIN-202ENST00000462880 TRIM41Q8WV44 630 aa25.83■■□□□ 1.73
SNAPIN-202ENST00000462880 CEP164Q9UPV0 1460 aa25.77■■□□□ 1.72
SNAPIN-202ENST00000462880 FANCD2Q9BXW9 1451 aa25.76■■□□□ 1.71
SNAPIN-202ENST00000462880 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
SNAPIN-202ENST00000462880 CFTRP13569 1480 aa25.69■■□□□ 1.7
SNAPIN-202ENST00000462880 TOP2AP11388 1531 aaKnown RBP25.63■■□□□ 1.69
SNAPIN-202ENST00000462880 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
SNAPIN-202ENST00000462880 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
SNAPIN-202ENST00000462880 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
SNAPIN-202ENST00000462880 ZNF608Q9ULD9 1512 aaPredicted RBP25.39■■□□□ 1.66
SNAPIN-202ENST00000462880 PRDM2Q13029 1718 aa25.36■■□□□ 1.65
SNAPIN-202ENST00000462880 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
SNAPIN-202ENST00000462880 RIMBP3CA6NJZ7 1639 aa25.24■■□□□ 1.63
SNAPIN-202ENST00000462880 RIMBP3BA6NNM3 1639 aa25.24■■□□□ 1.63
SNAPIN-202ENST00000462880 RIMBP3Q9UFD9 1639 aa25.24■■□□□ 1.63
SNAPIN-202ENST00000462880 IFT140Q96RY7 1462 aa25.23■■□□□ 1.63
SNAPIN-202ENST00000462880 EIF4G3O43432 1585 aaKnown RBP25.16■■□□□ 1.62
SNAPIN-202ENST00000462880 ARHGEF11O15085 1522 aa25.12■■□□□ 1.61
SNAPIN-202ENST00000462880 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SNAPIN-202ENST00000462880 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.618e-7■■■■■ 27.6
SNAPIN-202ENST00000462880 TARBP1Q13395 1621 aaKnown RBP25.07■■□□□ 1.6
SNAPIN-202ENST00000462880 CHD1O14646 1710 aa25.03■■□□□ 1.6
SNAPIN-202ENST00000462880 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
SNAPIN-202ENST00000462880 POLA1P09884 1462 aaPredicted RBP25■■□□□ 1.59
SNAPIN-202ENST00000462880 RAD54L2Q9Y4B4 1467 aa24.99■■□□□ 1.59
SNAPIN-202ENST00000462880 CYB5RLQ6IPT4 315 aa24.97■■□□□ 1.59
SNAPIN-202ENST00000462880 FBLN2P98095 1184 aa24.94■■□□□ 1.58
SNAPIN-202ENST00000462880 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
SNAPIN-202ENST00000462880 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
SNAPIN-202ENST00000462880 SOGA1O94964 1423 aa24.85■■□□□ 1.57
SNAPIN-202ENST00000462880 FGD5Q6ZNL6 1462 aa24.82■■□□□ 1.56
SNAPIN-202ENST00000462880 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
SNAPIN-202ENST00000462880 CUX1P39880 1505 aa24.8■■□□□ 1.56
SNAPIN-202ENST00000462880 TRHP20396 242 aaPredicted RBP24.73■■□□□ 1.55
SNAPIN-202ENST00000462880 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
SNAPIN-202ENST00000462880 CHMP7Q8WUX9 453 aaPredicted RBP24.64■■□□□ 1.54
SNAPIN-202ENST00000462880 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
SNAPIN-202ENST00000462880 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
SNAPIN-202ENST00000462880 MAGI1Q96QZ7 1491 aaPredicted RBP24.61■■□□□ 1.53
SNAPIN-202ENST00000462880 SYNJ1O43426 1573 aa24.58■■□□□ 1.52
SNAPIN-202ENST00000462880 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
SNAPIN-202ENST00000462880 PBRM1Q86U86 1689 aa24.56■■□□□ 1.52
SNAPIN-202ENST00000462880 GAPVD1Q14C86 1478 aa24.53■■□□□ 1.52
SNAPIN-202ENST00000462880 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
SNAPIN-202ENST00000462880 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
SNAPIN-202ENST00000462880 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
SNAPIN-202ENST00000462880 ERCC6L2Q5T890 1561 aa24.45■■□□□ 1.5
SNAPIN-202ENST00000462880 GRIN2AQ12879 1464 aa24.34■■□□□ 1.49
SNAPIN-202ENST00000462880 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
SNAPIN-202ENST00000462880 ADAMTS12P58397 1594 aa24.33■■□□□ 1.48
SNAPIN-202ENST00000462880 WRNQ14191 1432 aaPredicted RBP eCLIP24.29■■□□□ 1.48
SNAPIN-202ENST00000462880 NUP160Q12769 1436 aa24.27■■□□□ 1.48
SNAPIN-202ENST00000462880 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
SNAPIN-202ENST00000462880 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
SNAPIN-202ENST00000462880 SHROOM2Q13796 1616 aa24.18■■□□□ 1.46
SNAPIN-202ENST00000462880 FHAD1B1AJZ9 1412 aa24.18■■□□□ 1.46
SNAPIN-202ENST00000462880 ERICH3Q5RHP9 1530 aa24.11■■□□□ 1.45
SNAPIN-202ENST00000462880 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
SNAPIN-202ENST00000462880 PRG4Q92954 1404 aaPredicted RBP24.07■■□□□ 1.44
SNAPIN-202ENST00000462880 KIF13AQ9H1H9 1805 aa24.02■■□□□ 1.44
SNAPIN-202ENST00000462880 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms