RNA–Protein interactions for RNA: ENST00000462748.6

ZIC4-203, Transcript of Zic family member 4, humanhuman

TSL 1 (best)

Gene ZIC4, Length 929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-203ENST00000462748 NISCHQ9Y2I1 1504 aa44.72■■■■■ 4.75
ZIC4-203ENST00000462748 CCDC180Q9P1Z9 1646 aa40.02■■■■■ 4
ZIC4-203ENST00000462748 ABCC9O60706 1549 aa39.53■■■■□ 3.92
ZIC4-203ENST00000462748 RB1CC1Q8TDY2 1594 aa37.93■■■■□ 3.66
ZIC4-203ENST00000462748 NACADO15069 1562 aa37.79■■■■□ 3.64
ZIC4-203ENST00000462748 DCAF8L2P0C7V8 631 aa37.49■■■■□ 3.59
ZIC4-203ENST00000462748 MYO15BQ96JP2 1530 aa37.48■■■■□ 3.59
ZIC4-203ENST00000462748 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.54
ZIC4-203ENST00000462748 DCAF1Q9Y4B6 1507 aa37.09■■■■□ 3.53
ZIC4-203ENST00000462748 UNC13AQ9UPW8 1703 aa36.9■■■■□ 3.5
ZIC4-203ENST00000462748 PABPN1Q86U42 306 aaKnown RBP eCLIP36.83■■■■□ 3.49
ZIC4-203ENST00000462748 DNAJC5BQ9UF47 199 aa36.71■■■■□ 3.47
ZIC4-203ENST00000462748 BICRAQ9NZM4 1560 aa36.69■■■■□ 3.46
ZIC4-203ENST00000462748 SHROOM4Q9ULL8 1493 aa36.51■■■■□ 3.44
ZIC4-203ENST00000462748 SCRIBQ14160 1630 aa36.34■■■■□ 3.41
ZIC4-203ENST00000462748 EIF4G1Q04637 1599 aaKnown RBP35.81■■■■□ 3.32
ZIC4-203ENST00000462748 CC2D2AQ9P2K1 1620 aa35.77■■■■□ 3.32
ZIC4-203ENST00000462748 CECR2Q9BXF3 1484 aa35.66■■■■□ 3.3
ZIC4-203ENST00000462748 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
ZIC4-203ENST00000462748 SMARCA4P51532 1647 aa34.77■■■■□ 3.16
ZIC4-203ENST00000462748 ATAD2BQ9ULI0 1458 aa34.76■■■■□ 3.15
ZIC4-203ENST00000462748 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
ZIC4-203ENST00000462748 BAZ1AQ9NRL2 1556 aaPredicted RBP34.74■■■■□ 3.15
ZIC4-203ENST00000462748 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
ZIC4-203ENST00000462748 PEG3Q9GZU2 1588 aa34.53■■■■□ 3.12
ZIC4-203ENST00000462748 BAZ1BQ9UIG0 1483 aaKnown RBP34.45■■■■□ 3.1
ZIC4-203ENST00000462748 MROH2BQ7Z745 1585 aa34.37■■■■□ 3.09
ZIC4-203ENST00000462748 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
ZIC4-203ENST00000462748 CUX2O14529 1486 aa34.11■■■■□ 3.05
ZIC4-203ENST00000462748 LAMC3Q9Y6N6 1575 aa34.02■■■■□ 3.04
ZIC4-203ENST00000462748 NESP48681 1621 aa34.02■■■■□ 3.04
ZIC4-203ENST00000462748 WIZO95785 1651 aa33.95■■■■□ 3.03
ZIC4-203ENST00000462748 PDS5BQ9NTI5 1447 aa33.86■■■■□ 3.01
ZIC4-203ENST00000462748 RSF1Q96T23 1441 aaPredicted RBP33.85■■■■□ 3.01
ZIC4-203ENST00000462748 CADPSQ9ULU8 1353 aa33.82■■■■□ 3
ZIC4-203ENST00000462748 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
ZIC4-203ENST00000462748 TOP2AP11388 1531 aaKnown RBP33.66■■■□□ 2.98
ZIC4-203ENST00000462748 DNAJC5Q9H3Z4 198 aa33.63■■■□□ 2.97
ZIC4-203ENST00000462748 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
ZIC4-203ENST00000462748 CFTRP13569 1480 aa33.5■■■□□ 2.95
ZIC4-203ENST00000462748 MRC2Q9UBG0 1479 aa33.47■■■□□ 2.95
ZIC4-203ENST00000462748 CEP164Q9UPV0 1460 aa33.41■■■□□ 2.94
ZIC4-203ENST00000462748 FANCD2Q9BXW9 1451 aa33.38■■■□□ 2.93
ZIC4-203ENST00000462748 WDR62O43379 1518 aa33.37■■■□□ 2.93
ZIC4-203ENST00000462748 CCDC88BA6NC98 1476 aa33.24■■■□□ 2.91
ZIC4-203ENST00000462748 PRDM2Q13029 1718 aa33.14■■■□□ 2.9
ZIC4-203ENST00000462748 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
ZIC4-203ENST00000462748 ABCC8Q09428 1581 aa32.88■■■□□ 2.85
ZIC4-203ENST00000462748 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
ZIC4-203ENST00000462748 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
ZIC4-203ENST00000462748 DNMBPQ6XZF7 1577 aa32.71■■■□□ 2.83
ZIC4-203ENST00000462748 OSCARQ8IYS5 282 aa32.58■■■□□ 2.81
ZIC4-203ENST00000462748 ZNF608Q9ULD9 1512 aaPredicted RBP32.52■■■□□ 2.8
ZIC4-203ENST00000462748 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
ZIC4-203ENST00000462748 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
ZIC4-203ENST00000462748 TARBP1Q13395 1621 aaKnown RBP32.44■■■□□ 2.78
ZIC4-203ENST00000462748 EIF4G3O43432 1585 aaKnown RBP32.41■■■□□ 2.78
ZIC4-203ENST00000462748 SOGA1O94964 1423 aa32.34■■■□□ 2.77
ZIC4-203ENST00000462748 WDR97A6NE52 1622 aa32.31■■■□□ 2.76
ZIC4-203ENST00000462748 AQRO60306 1485 aaKnown RBP eCLIP32.3■■■□□ 2.76
ZIC4-203ENST00000462748 CUX1P39880 1505 aa32.29■■■□□ 2.76
ZIC4-203ENST00000462748 FGD5Q6ZNL6 1462 aa32.29■■■□□ 2.76
ZIC4-203ENST00000462748 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
ZIC4-203ENST00000462748 TDRD9Q8NDG6 1382 aaKnown RBP32.17■■■□□ 2.74
ZIC4-203ENST00000462748 TRIM41Q8WV44 630 aa32.16■■■□□ 2.74
ZIC4-203ENST00000462748 GRIN2BQ13224 1484 aa32.06■■■□□ 2.72
ZIC4-203ENST00000462748 CHD1O14646 1710 aa32.06■■■□□ 2.72
ZIC4-203ENST00000462748 MAGI1Q96QZ7 1491 aaPredicted RBP32.05■■■□□ 2.72
ZIC4-203ENST00000462748 FBLN2P98095 1184 aa32.03■■■□□ 2.72
ZIC4-203ENST00000462748 ABCA10Q8WWZ4 1543 aa32.02■■■□□ 2.72
ZIC4-203ENST00000462748 SNAPC4Q5SXM2 1469 aa32.01■■■□□ 2.71
ZIC4-203ENST00000462748 RIMBP3CA6NJZ7 1639 aa32■■■□□ 2.71
ZIC4-203ENST00000462748 RIMBP3BA6NNM3 1639 aa32■■■□□ 2.71
ZIC4-203ENST00000462748 RIMBP3Q9UFD9 1639 aa32■■■□□ 2.71
ZIC4-203ENST00000462748 ARHGEF11O15085 1522 aa31.98■■■□□ 2.71
ZIC4-203ENST00000462748 WRNQ14191 1432 aaPredicted RBP eCLIP31.98■■■□□ 2.71
ZIC4-203ENST00000462748 GAPVD1Q14C86 1478 aa31.96■■■□□ 2.71
ZIC4-203ENST00000462748 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
ZIC4-203ENST00000462748 TOP2BQ02880 1626 aa31.93■■■□□ 2.7
ZIC4-203ENST00000462748 BIVM-ERCC5R4GMW8 1640 aa31.92■■■□□ 2.7
ZIC4-203ENST00000462748 SYNJ2O15056 1496 aa31.91■■■□□ 2.7
ZIC4-203ENST00000462748 ABCA5Q8WWZ7 1642 aa31.88■■■□□ 2.69
ZIC4-203ENST00000462748 PBRM1Q86U86 1689 aa31.85■■■□□ 2.69
ZIC4-203ENST00000462748 SYNJ1O43426 1573 aa31.85■■■□□ 2.69
ZIC4-203ENST00000462748 CLASP1Q7Z460 1538 aa31.78■■■□□ 2.68
ZIC4-203ENST00000462748 CYB5RLQ6IPT4 315 aa31.7■■■□□ 2.67
ZIC4-203ENST00000462748 ARAP1Q96P48 1450 aa31.66■■■□□ 2.66
ZIC4-203ENST00000462748 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
ZIC4-203ENST00000462748 ADAMTS12P58397 1594 aa31.61■■■□□ 2.65
ZIC4-203ENST00000462748 GRIN2AQ12879 1464 aa31.61■■■□□ 2.65
ZIC4-203ENST00000462748 FHAD1B1AJZ9 1412 aa31.61■■■□□ 2.65
ZIC4-203ENST00000462748 NUP160Q12769 1436 aa31.52■■■□□ 2.64
ZIC4-203ENST00000462748 CEP170Q5SW79 1584 aa31.41■■■□□ 2.62
ZIC4-203ENST00000462748 KIF27Q86VH2 1401 aa31.37■■■□□ 2.61
ZIC4-203ENST00000462748 SHROOM2Q13796 1616 aa31.31■■■□□ 2.6
ZIC4-203ENST00000462748 IGF1RP08069 1367 aa31.28■■■□□ 2.6
ZIC4-203ENST00000462748 TRHP20396 242 aaPredicted RBP31.24■■■□□ 2.59
ZIC4-203ENST00000462748 CUL7Q14999 1698 aa31.24■■■□□ 2.59
ZIC4-203ENST00000462748 JPH4Q96JJ6 628 aa31.19■■■□□ 2.58
ZIC4-203ENST00000462748 ERCC6L2Q5T890 1561 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms