RNA–Protein interactions for RNA: ENST00000462727.1

TFAP2A-205, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 3

Gene TFAP2A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-205ENST00000462727 NISCHQ9Y2I1 1504 aa36.95■■■■□ 3.51
TFAP2A-205ENST00000462727 CCDC180Q9P1Z9 1646 aa32.94■■■□□ 2.86
TFAP2A-205ENST00000462727 ABCC9O60706 1549 aa32.56■■■□□ 2.8
TFAP2A-205ENST00000462727 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
TFAP2A-205ENST00000462727 NACADO15069 1562 aa31.07■■■□□ 2.56
TFAP2A-205ENST00000462727 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
TFAP2A-205ENST00000462727 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
TFAP2A-205ENST00000462727 ZCCHC6Q5VYS8 1495 aaKnown RBP30.7■■■□□ 2.51
TFAP2A-205ENST00000462727 DCAF1Q9Y4B6 1507 aa30.56■■■□□ 2.48
TFAP2A-205ENST00000462727 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
TFAP2A-205ENST00000462727 PABPN1Q86U42 306 aaKnown RBP eCLIP30.41■■■□□ 2.46
TFAP2A-205ENST00000462727 BICRAQ9NZM4 1560 aa30.28■■■□□ 2.44
TFAP2A-205ENST00000462727 DNAJC5BQ9UF47 199 aa30.25■■■□□ 2.43
TFAP2A-205ENST00000462727 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
TFAP2A-205ENST00000462727 SHROOM4Q9ULL8 1493 aa29.88■■■□□ 2.37
TFAP2A-205ENST00000462727 EIF4G1Q04637 1599 aaKnown RBP29.47■■■□□ 2.31
TFAP2A-205ENST00000462727 CC2D2AQ9P2K1 1620 aa29.43■■■□□ 2.3
TFAP2A-205ENST00000462727 CECR2Q9BXF3 1484 aa29.29■■■□□ 2.28
TFAP2A-205ENST00000462727 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
TFAP2A-205ENST00000462727 NCAPD3P42695 1498 aa28.71■■■□□ 2.19
TFAP2A-205ENST00000462727 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
TFAP2A-205ENST00000462727 BAZ1AQ9NRL2 1556 aaPredicted RBP28.63■■■□□ 2.17
TFAP2A-205ENST00000462727 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
TFAP2A-205ENST00000462727 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
TFAP2A-205ENST00000462727 MROH2BQ7Z745 1585 aa28.48■■■□□ 2.15
TFAP2A-205ENST00000462727 PEG3Q9GZU2 1588 aa28.45■■■□□ 2.15
TFAP2A-205ENST00000462727 BAZ1BQ9UIG0 1483 aaKnown RBP28.38■■■□□ 2.13
TFAP2A-205ENST00000462727 WIZO95785 1651 aa28.14■■■□□ 2.1
TFAP2A-205ENST00000462727 NESP48681 1621 aa28.1■■■□□ 2.09
TFAP2A-205ENST00000462727 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
TFAP2A-205ENST00000462727 ERCC6Q03468 1493 aa28.05■■■□□ 2.08
TFAP2A-205ENST00000462727 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.07
TFAP2A-205ENST00000462727 CUX2O14529 1486 aa27.89■■■□□ 2.05
TFAP2A-205ENST00000462727 CADPSQ9ULU8 1353 aa27.86■■■□□ 2.05
TFAP2A-205ENST00000462727 TOP2AP11388 1531 aaKnown RBP27.81■■■□□ 2.04
TFAP2A-205ENST00000462727 PDS5BQ9NTI5 1447 aa27.8■■■□□ 2.04
TFAP2A-205ENST00000462727 KIF21AQ7Z4S6 1674 aa27.72■■■□□ 2.03
TFAP2A-205ENST00000462727 THOC2Q8NI27 1593 aaKnown RBP27.7■■■□□ 2.03
TFAP2A-205ENST00000462727 CFTRP13569 1480 aa27.62■■■□□ 2.01
TFAP2A-205ENST00000462727 CCDC88BA6NC98 1476 aa27.52■■■□□ 2
TFAP2A-205ENST00000462727 MRC2Q9UBG0 1479 aa27.51■■■□□ 2
TFAP2A-205ENST00000462727 FANCD2Q9BXW9 1451 aa27.51■■□□□ 1.99
TFAP2A-205ENST00000462727 CEP164Q9UPV0 1460 aa27.48■■□□□ 1.99
TFAP2A-205ENST00000462727 DNAJC5Q9H3Z4 198 aa27.46■■□□□ 1.99
TFAP2A-205ENST00000462727 WDR62O43379 1518 aa27.44■■□□□ 1.98
TFAP2A-205ENST00000462727 PRDM2Q13029 1718 aa27.3■■□□□ 1.96
TFAP2A-205ENST00000462727 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.96
TFAP2A-205ENST00000462727 SUPT5HO00267 1087 aaKnown RBP27.1■■□□□ 1.93
TFAP2A-205ENST00000462727 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
TFAP2A-205ENST00000462727 ABCC8Q09428 1581 aa27.01■■□□□ 1.91
TFAP2A-205ENST00000462727 DNMBPQ6XZF7 1577 aa26.96■■□□□ 1.91
TFAP2A-205ENST00000462727 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
TFAP2A-205ENST00000462727 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
TFAP2A-205ENST00000462727 POLA1P09884 1462 aaPredicted RBP26.79■■□□□ 1.88
TFAP2A-205ENST00000462727 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
TFAP2A-205ENST00000462727 OSCARQ8IYS5 282 aa26.73■■□□□ 1.87
TFAP2A-205ENST00000462727 CUX1P39880 1505 aa26.73■■□□□ 1.87
TFAP2A-205ENST00000462727 RAD54L2Q9Y4B4 1467 aa26.69■■□□□ 1.86
TFAP2A-205ENST00000462727 EIF4G3O43432 1585 aaKnown RBP26.69■■□□□ 1.86
TFAP2A-205ENST00000462727 SOGA1O94964 1423 aa26.69■■□□□ 1.86
TFAP2A-205ENST00000462727 AQRO60306 1485 aaKnown RBP eCLIP26.68■■□□□ 1.86
TFAP2A-205ENST00000462727 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
TFAP2A-205ENST00000462727 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
TFAP2A-205ENST00000462727 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
TFAP2A-205ENST00000462727 WRNQ14191 1432 aaPredicted RBP eCLIP26.43■■□□□ 1.82
TFAP2A-205ENST00000462727 ABCA10Q8WWZ4 1543 aa26.41■■□□□ 1.82
TFAP2A-205ENST00000462727 CHD1O14646 1710 aa26.41■■□□□ 1.82
TFAP2A-205ENST00000462727 TOP2BQ02880 1626 aa26.4■■□□□ 1.82
TFAP2A-205ENST00000462727 FBLN2P98095 1184 aa26.4■■□□□ 1.82
TFAP2A-205ENST00000462727 GRIN2BQ13224 1484 aa26.39■■□□□ 1.82
TFAP2A-205ENST00000462727 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
TFAP2A-205ENST00000462727 BIVM-ERCC5R4GMW8 1640 aa26.39■■□□□ 1.81
TFAP2A-205ENST00000462727 SYNJ1O43426 1573 aa26.38■■□□□ 1.81
TFAP2A-205ENST00000462727 TRIM41Q8WV44 630 aa26.37■■□□□ 1.81
TFAP2A-205ENST00000462727 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
TFAP2A-205ENST00000462727 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
TFAP2A-205ENST00000462727 ABCA5Q8WWZ7 1642 aa26.31■■□□□ 1.8
TFAP2A-205ENST00000462727 CHMP7Q8WUX9 453 aaPredicted RBP26.29■■□□□ 1.8
TFAP2A-205ENST00000462727 RIMBP3CA6NJZ7 1639 aa26.28■■□□□ 1.8
TFAP2A-205ENST00000462727 RIMBP3BA6NNM3 1639 aa26.28■■□□□ 1.8
TFAP2A-205ENST00000462727 RIMBP3Q9UFD9 1639 aa26.28■■□□□ 1.8
TFAP2A-205ENST00000462727 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
TFAP2A-205ENST00000462727 ARHGEF11O15085 1522 aa26.25■■□□□ 1.79
TFAP2A-205ENST00000462727 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
TFAP2A-205ENST00000462727 CLASP1Q7Z460 1538 aa26.15■■□□□ 1.78
TFAP2A-205ENST00000462727 ERICH3Q5RHP9 1530 aa26.08■■□□□ 1.77
TFAP2A-205ENST00000462727 ADAMTS12P58397 1594 aa26.07■■□□□ 1.76
TFAP2A-205ENST00000462727 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
TFAP2A-205ENST00000462727 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
TFAP2A-205ENST00000462727 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
TFAP2A-205ENST00000462727 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
TFAP2A-205ENST00000462727 NUP160Q12769 1436 aa25.97■■□□□ 1.75
TFAP2A-205ENST00000462727 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
TFAP2A-205ENST00000462727 KIF27Q86VH2 1401 aa25.9■■□□□ 1.74
TFAP2A-205ENST00000462727 IGF1RP08069 1367 aa25.89■■□□□ 1.74
TFAP2A-205ENST00000462727 SHROOM2Q13796 1616 aa25.79■■□□□ 1.72
TFAP2A-205ENST00000462727 ERCC6L2Q5T890 1561 aa25.78■■□□□ 1.72
TFAP2A-205ENST00000462727 CUL7Q14999 1698 aa25.75■■□□□ 1.71
TFAP2A-205ENST00000462727 JPH4Q96JJ6 628 aa25.73■■□□□ 1.71
TFAP2A-205ENST00000462727 CARMIL1Q5VZK9 1371 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms