RNA–Protein interactions for RNA: ENST00000462621.1

GRIK3-203, Transcript of glutamate ionotropic receptor kainate type subunit 3, humanhuman

TSL 3

Gene GRIK3, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK3-203ENST00000462621 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
GRIK3-203ENST00000462621 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
GRIK3-203ENST00000462621 ABCC9O60706 1549 aa28.84■■■□□ 2.21
GRIK3-203ENST00000462621 RB1CC1Q8TDY2 1594 aa27.41■■□□□ 1.98
GRIK3-203ENST00000462621 NACADO15069 1562 aa27.26■■□□□ 1.95
GRIK3-203ENST00000462621 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
GRIK3-203ENST00000462621 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
GRIK3-203ENST00000462621 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
GRIK3-203ENST00000462621 PABPN1Q86U42 306 aaKnown RBP eCLIP26.92■■□□□ 1.9
GRIK3-203ENST00000462621 UNC13AQ9UPW8 1703 aa26.88■■□□□ 1.89
GRIK3-203ENST00000462621 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
GRIK3-203ENST00000462621 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
GRIK3-203ENST00000462621 DCAF1Q9Y4B6 1507 aa26.66■■□□□ 1.86
GRIK3-203ENST00000462621 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
GRIK3-203ENST00000462621 SHROOM4Q9ULL8 1493 aa26.2■■□□□ 1.78
GRIK3-203ENST00000462621 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
GRIK3-203ENST00000462621 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
GRIK3-203ENST00000462621 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
GRIK3-203ENST00000462621 NCAPD3P42695 1498 aa25.21■■□□□ 1.63
GRIK3-203ENST00000462621 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
GRIK3-203ENST00000462621 SMARCA4P51532 1647 aa25.19■■□□□ 1.62
GRIK3-203ENST00000462621 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
GRIK3-203ENST00000462621 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
GRIK3-203ENST00000462621 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
GRIK3-203ENST00000462621 MROH2BQ7Z745 1585 aa24.98■■□□□ 1.59
GRIK3-203ENST00000462621 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
GRIK3-203ENST00000462621 BAZ1BQ9UIG0 1483 aaKnown RBP24.91■■□□□ 1.58
GRIK3-203ENST00000462621 NESP48681 1621 aa24.87■■□□□ 1.57
GRIK3-203ENST00000462621 ERCC6Q03468 1493 aa24.8■■□□□ 1.56
GRIK3-203ENST00000462621 CUX2O14529 1486 aa24.68■■□□□ 1.54
GRIK3-203ENST00000462621 WIZO95785 1651 aa24.68■■□□□ 1.54
GRIK3-203ENST00000462621 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
GRIK3-203ENST00000462621 DNAJC5Q9H3Z4 198 aa24.54■■□□□ 1.52
GRIK3-203ENST00000462621 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
GRIK3-203ENST00000462621 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
GRIK3-203ENST00000462621 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
GRIK3-203ENST00000462621 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
GRIK3-203ENST00000462621 PDS5BQ9NTI5 1447 aa24.42■■□□□ 1.5
GRIK3-203ENST00000462621 TOP2AP11388 1531 aaKnown RBP24.32■■□□□ 1.48
GRIK3-203ENST00000462621 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
GRIK3-203ENST00000462621 CFTRP13569 1480 aa24.22■■□□□ 1.47
GRIK3-203ENST00000462621 WDR62O43379 1518 aa24.2■■□□□ 1.46
GRIK3-203ENST00000462621 FANCD2Q9BXW9 1451 aa24.19■■□□□ 1.46
GRIK3-203ENST00000462621 CEP164Q9UPV0 1460 aa24.17■■□□□ 1.46
GRIK3-203ENST00000462621 CCDC88BA6NC98 1476 aa24.09■■□□□ 1.45
GRIK3-203ENST00000462621 URB2Q14146 1524 aaKnown RBP24.04■■□□□ 1.44
GRIK3-203ENST00000462621 PRDM2Q13029 1718 aa23.92■■□□□ 1.42
GRIK3-203ENST00000462621 TOPBP1Q92547 1522 aa23.76■■□□□ 1.39
GRIK3-203ENST00000462621 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
GRIK3-203ENST00000462621 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
GRIK3-203ENST00000462621 DNMBPQ6XZF7 1577 aa23.65■■□□□ 1.38
GRIK3-203ENST00000462621 OSCARQ8IYS5 282 aa23.59■■□□□ 1.37
GRIK3-203ENST00000462621 ABCC8Q09428 1581 aa23.59■■□□□ 1.37
GRIK3-203ENST00000462621 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
GRIK3-203ENST00000462621 TARBP1Q13395 1621 aaKnown RBP23.55■■□□□ 1.36
GRIK3-203ENST00000462621 EIF4G3O43432 1585 aaKnown RBP23.55■■□□□ 1.36
GRIK3-203ENST00000462621 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
GRIK3-203ENST00000462621 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
GRIK3-203ENST00000462621 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.35
GRIK3-203ENST00000462621 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
GRIK3-203ENST00000462621 CUX1P39880 1505 aa23.45■■□□□ 1.34
GRIK3-203ENST00000462621 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
GRIK3-203ENST00000462621 SOGA1O94964 1423 aa23.41■■□□□ 1.34
GRIK3-203ENST00000462621 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.33
GRIK3-203ENST00000462621 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.33
GRIK3-203ENST00000462621 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.33
GRIK3-203ENST00000462621 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
GRIK3-203ENST00000462621 CHD1O14646 1710 aa23.33■■□□□ 1.33
GRIK3-203ENST00000462621 ARHGEF11O15085 1522 aa23.28■■□□□ 1.32
GRIK3-203ENST00000462621 FBLN2P98095 1184 aa23.26■■□□□ 1.31
GRIK3-203ENST00000462621 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
GRIK3-203ENST00000462621 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
GRIK3-203ENST00000462621 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
GRIK3-203ENST00000462621 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
GRIK3-203ENST00000462621 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
GRIK3-203ENST00000462621 MAGI1Q96QZ7 1491 aaPredicted RBP23.12■■□□□ 1.29
GRIK3-203ENST00000462621 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
GRIK3-203ENST00000462621 ABCA5Q8WWZ7 1642 aa23.1■■□□□ 1.29
GRIK3-203ENST00000462621 PBRM1Q86U86 1689 aa23.09■■□□□ 1.29
GRIK3-203ENST00000462621 CLASP1Q7Z460 1538 aa23.09■■□□□ 1.29
GRIK3-203ENST00000462621 CYB5RLQ6IPT4 315 aa23.09■■□□□ 1.29
GRIK3-203ENST00000462621 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
GRIK3-203ENST00000462621 CHMP7Q8WUX9 453 aaPredicted RBP23.08■■□□□ 1.29
GRIK3-203ENST00000462621 SYNJ2O15056 1496 aa23.07■■□□□ 1.28
GRIK3-203ENST00000462621 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
GRIK3-203ENST00000462621 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
GRIK3-203ENST00000462621 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
GRIK3-203ENST00000462621 ADAMTS12P58397 1594 aa22.92■■□□□ 1.26
GRIK3-203ENST00000462621 GRIN2AQ12879 1464 aa22.89■■□□□ 1.25
GRIK3-203ENST00000462621 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
GRIK3-203ENST00000462621 ERCC6L2Q5T890 1561 aa22.83■■□□□ 1.25
GRIK3-203ENST00000462621 NUP160Q12769 1436 aa22.82■■□□□ 1.24
GRIK3-203ENST00000462621 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
GRIK3-203ENST00000462621 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
GRIK3-203ENST00000462621 TRHP20396 242 aaPredicted RBP22.73■■□□□ 1.23
GRIK3-203ENST00000462621 SHROOM2Q13796 1616 aa22.69■■□□□ 1.22
GRIK3-203ENST00000462621 IGF1RP08069 1367 aa22.63■■□□□ 1.21
GRIK3-203ENST00000462621 RUSC2Q8N2Y8 1516 aa22.59■■□□□ 1.21
GRIK3-203ENST00000462621 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
GRIK3-203ENST00000462621 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms