RNA–Protein interactions for RNA: ENST00000462514.1

PTGDS-208, Transcript of prostaglandin D2 synthase, humanhuman

TSL 2

Gene PTGDS, Length 593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDS-208ENST00000462514 NISCHQ9Y2I1 1504 aa41.18■■■■■ 4.18
PTGDS-208ENST00000462514 ABCC9O60706 1549 aa37.04■■■■□ 3.52
PTGDS-208ENST00000462514 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
PTGDS-208ENST00000462514 RB1CC1Q8TDY2 1594 aa35.22■■■■□ 3.23
PTGDS-208ENST00000462514 NACADO15069 1562 aa34.97■■■■□ 3.19
PTGDS-208ENST00000462514 DNAJC5BQ9UF47 199 aa34.8■■■■□ 3.16
PTGDS-208ENST00000462514 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
PTGDS-208ENST00000462514 UNC13AQ9UPW8 1703 aa34.49■■■■□ 3.11
PTGDS-208ENST00000462514 MYO15BQ96JP2 1530 aa34.48■■■■□ 3.11
PTGDS-208ENST00000462514 PABPN1Q86U42 306 aaKnown RBP eCLIP34.45■■■■□ 3.11
PTGDS-208ENST00000462514 BICRAQ9NZM4 1560 aa34.24■■■■□ 3.07
PTGDS-208ENST00000462514 ZCCHC6Q5VYS8 1495 aaKnown RBP34.14■■■■□ 3.06
PTGDS-208ENST00000462514 DCAF1Q9Y4B6 1507 aa34.02■■■■□ 3.04
PTGDS-208ENST00000462514 SHROOM4Q9ULL8 1493 aa33.76■■■□□ 2.99
PTGDS-208ENST00000462514 SCRIBQ14160 1630 aa33.71■■■□□ 2.99
PTGDS-208ENST00000462514 CC2D2AQ9P2K1 1620 aa33.47■■■□□ 2.95
PTGDS-208ENST00000462514 EIF4G1Q04637 1599 aaKnown RBP33.39■■■□□ 2.94
PTGDS-208ENST00000462514 CECR2Q9BXF3 1484 aa33.37■■■□□ 2.93
PTGDS-208ENST00000462514 NCAPD3P42695 1498 aa32.29■■■□□ 2.76
PTGDS-208ENST00000462514 ATAD2BQ9ULI0 1458 aa32.19■■■□□ 2.74
PTGDS-208ENST00000462514 SMARCA4P51532 1647 aa32.15■■■□□ 2.74
PTGDS-208ENST00000462514 SMARCA2P51531 1590 aa32.08■■■□□ 2.73
PTGDS-208ENST00000462514 HMGXB3Q12766 1538 aa32.06■■■□□ 2.72
PTGDS-208ENST00000462514 DNAJC5Q9H3Z4 198 aa31.98■■■□□ 2.71
PTGDS-208ENST00000462514 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
PTGDS-208ENST00000462514 ERCC6Q03468 1493 aa31.97■■■□□ 2.71
PTGDS-208ENST00000462514 CUX2O14529 1486 aa31.96■■■□□ 2.71
PTGDS-208ENST00000462514 BAZ1BQ9UIG0 1483 aaKnown RBP31.86■■■□□ 2.69
PTGDS-208ENST00000462514 PEG3Q9GZU2 1588 aa31.85■■■□□ 2.69
PTGDS-208ENST00000462514 NESP48681 1621 aa31.82■■■□□ 2.68
PTGDS-208ENST00000462514 MROH2BQ7Z745 1585 aa31.73■■■□□ 2.67
PTGDS-208ENST00000462514 LAMC3Q9Y6N6 1575 aa31.58■■■□□ 2.65
PTGDS-208ENST00000462514 THOC2Q8NI27 1593 aaKnown RBP31.53■■■□□ 2.64
PTGDS-208ENST00000462514 KIF21AQ7Z4S6 1674 aa31.42■■■□□ 2.62
PTGDS-208ENST00000462514 PDS5BQ9NTI5 1447 aa31.37■■■□□ 2.61
PTGDS-208ENST00000462514 WIZO95785 1651 aa31.35■■■□□ 2.61
PTGDS-208ENST00000462514 CADPSQ9ULU8 1353 aa31.29■■■□□ 2.6
PTGDS-208ENST00000462514 MRC2Q9UBG0 1479 aa31.13■■■□□ 2.57
PTGDS-208ENST00000462514 WDR62O43379 1518 aa31.08■■■□□ 2.57
PTGDS-208ENST00000462514 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
PTGDS-208ENST00000462514 CEP164Q9UPV0 1460 aa30.99■■■□□ 2.55
PTGDS-208ENST00000462514 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.55
PTGDS-208ENST00000462514 TOP2AP11388 1531 aaKnown RBP30.95■■■□□ 2.55
PTGDS-208ENST00000462514 CFTRP13569 1480 aa30.94■■■□□ 2.54
PTGDS-208ENST00000462514 URB2Q14146 1524 aaKnown RBP30.72■■■□□ 2.51
PTGDS-208ENST00000462514 PRDM2Q13029 1718 aa30.65■■■□□ 2.5
PTGDS-208ENST00000462514 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
PTGDS-208ENST00000462514 TRIM41Q8WV44 630 aa30.54■■■□□ 2.48
PTGDS-208ENST00000462514 OSCARQ8IYS5 282 aa30.43■■■□□ 2.46
PTGDS-208ENST00000462514 TOPBP1Q92547 1522 aa30.37■■■□□ 2.45
PTGDS-208ENST00000462514 IFT140Q96RY7 1462 aa30.36■■■□□ 2.45
PTGDS-208ENST00000462514 ZNF608Q9ULD9 1512 aaPredicted RBP30.35■■■□□ 2.45
PTGDS-208ENST00000462514 ABCC8Q09428 1581 aa30.25■■■□□ 2.43
PTGDS-208ENST00000462514 DNMBPQ6XZF7 1577 aa30.24■■■□□ 2.43
PTGDS-208ENST00000462514 EIF4G3O43432 1585 aaKnown RBP30.19■■■□□ 2.42
PTGDS-208ENST00000462514 TARBP1Q13395 1621 aaKnown RBP30.12■■■□□ 2.41
PTGDS-208ENST00000462514 RIMBP3CA6NJZ7 1639 aa30.11■■■□□ 2.41
PTGDS-208ENST00000462514 RIMBP3BA6NNM3 1639 aa30.11■■■□□ 2.41
PTGDS-208ENST00000462514 RIMBP3Q9UFD9 1639 aa30.11■■■□□ 2.41
PTGDS-208ENST00000462514 POLA1P09884 1462 aaPredicted RBP30.06■■■□□ 2.4
PTGDS-208ENST00000462514 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
PTGDS-208ENST00000462514 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
PTGDS-208ENST00000462514 CHD1O14646 1710 aa29.97■■■□□ 2.39
PTGDS-208ENST00000462514 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
PTGDS-208ENST00000462514 SOGA1O94964 1423 aa29.88■■■□□ 2.37
PTGDS-208ENST00000462514 FGD5Q6ZNL6 1462 aa29.85■■■□□ 2.37
PTGDS-208ENST00000462514 CUX1P39880 1505 aa29.83■■■□□ 2.37
PTGDS-208ENST00000462514 TDRD9Q8NDG6 1382 aaKnown RBP29.83■■■□□ 2.37
PTGDS-208ENST00000462514 FBLN2P98095 1184 aa29.8■■■□□ 2.36
PTGDS-208ENST00000462514 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
PTGDS-208ENST00000462514 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
PTGDS-208ENST00000462514 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
PTGDS-208ENST00000462514 ARAP1Q96P48 1450 aa29.72■■■□□ 2.35
PTGDS-208ENST00000462514 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
PTGDS-208ENST00000462514 GRIN2BQ13224 1484 aa29.64■■■□□ 2.34
PTGDS-208ENST00000462514 CLASP1Q7Z460 1538 aa29.63■■■□□ 2.33
PTGDS-208ENST00000462514 CHMP7Q8WUX9 453 aaPredicted RBP29.58■■■□□ 2.33
PTGDS-208ENST00000462514 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
PTGDS-208ENST00000462514 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
PTGDS-208ENST00000462514 PBRM1Q86U86 1689 aa29.56■■■□□ 2.32
PTGDS-208ENST00000462514 SUPT5HO00267 1087 aaKnown RBP29.55■■■□□ 2.32
PTGDS-208ENST00000462514 GAPVD1Q14C86 1478 aa29.53■■■□□ 2.32
PTGDS-208ENST00000462514 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
PTGDS-208ENST00000462514 ABCA5Q8WWZ7 1642 aa29.5■■■□□ 2.31
PTGDS-208ENST00000462514 TRHP20396 242 aaPredicted RBP29.4■■■□□ 2.3
PTGDS-208ENST00000462514 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
PTGDS-208ENST00000462514 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
PTGDS-208ENST00000462514 TOP2BQ02880 1626 aa29.33■■■□□ 2.29
PTGDS-208ENST00000462514 GRIN2AQ12879 1464 aa29.28■■■□□ 2.28
PTGDS-208ENST00000462514 ADAMTS12P58397 1594 aa29.27■■■□□ 2.28
PTGDS-208ENST00000462514 CEP170Q5SW79 1584 aa29.19■■■□□ 2.26
PTGDS-208ENST00000462514 NUP160Q12769 1436 aa29.19■■■□□ 2.26
PTGDS-208ENST00000462514 ERCC6L2Q5T890 1561 aa29.17■■■□□ 2.26
PTGDS-208ENST00000462514 FHAD1B1AJZ9 1412 aa29.15■■■□□ 2.26
PTGDS-208ENST00000462514 ERICH3Q5RHP9 1530 aa29.14■■■□□ 2.25
PTGDS-208ENST00000462514 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
PTGDS-208ENST00000462514 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
PTGDS-208ENST00000462514 RUSC2Q8N2Y8 1516 aa28.88■■■□□ 2.21
PTGDS-208ENST00000462514 JPH4Q96JJ6 628 aa28.83■■■□□ 2.21
PTGDS-208ENST00000462514 KIF13AQ9H1H9 1805 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 385.9 ms