RNA–Protein interactions for RNA: ENST00000462451.1

VAMP5-202, Transcript of vesicle associated membrane protein 5, humanhuman

TSL 2

Gene VAMP5, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP5-202ENST00000462451 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.32
VAMP5-202ENST00000462451 ABCC9O60706 1549 aa26.92■■□□□ 1.9
VAMP5-202ENST00000462451 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
VAMP5-202ENST00000462451 DNAJC5BQ9UF47 199 aa25.63■■□□□ 1.69
VAMP5-202ENST00000462451 RB1CC1Q8TDY2 1594 aa25.42■■□□□ 1.66
VAMP5-202ENST00000462451 NACADO15069 1562 aa25.18■■□□□ 1.62
VAMP5-202ENST00000462451 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
VAMP5-202ENST00000462451 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
VAMP5-202ENST00000462451 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
VAMP5-202ENST00000462451 MYO15BQ96JP2 1530 aa24.75■■□□□ 1.55
VAMP5-202ENST00000462451 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
VAMP5-202ENST00000462451 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
VAMP5-202ENST00000462451 DCAF1Q9Y4B6 1507 aa24.33■■□□□ 1.49
VAMP5-202ENST00000462451 SHROOM4Q9ULL8 1493 aa24.31■■□□□ 1.48
VAMP5-202ENST00000462451 CECR2Q9BXF3 1484 aa24.27■■□□□ 1.48
VAMP5-202ENST00000462451 CC2D2AQ9P2K1 1620 aa24.25■■□□□ 1.47
VAMP5-202ENST00000462451 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
VAMP5-202ENST00000462451 EIF4G1Q04637 1599 aaKnown RBP24.13■■□□□ 1.45
VAMP5-202ENST00000462451 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
VAMP5-202ENST00000462451 NCAPD3P42695 1498 aa23.32■■□□□ 1.32
VAMP5-202ENST00000462451 CUX2O14529 1486 aa23.28■■□□□ 1.32
VAMP5-202ENST00000462451 ERCC6Q03468 1493 aa23.24■■□□□ 1.31
VAMP5-202ENST00000462451 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
VAMP5-202ENST00000462451 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
VAMP5-202ENST00000462451 NESP48681 1621 aa23.05■■□□□ 1.28
VAMP5-202ENST00000462451 HMGXB3Q12766 1538 aa23.04■■□□□ 1.28
VAMP5-202ENST00000462451 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
VAMP5-202ENST00000462451 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
VAMP5-202ENST00000462451 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
VAMP5-202ENST00000462451 PEG3Q9GZU2 1588 aa22.82■■□□□ 1.24
VAMP5-202ENST00000462451 THOC2Q8NI27 1593 aaKnown RBP22.78■■□□□ 1.24
VAMP5-202ENST00000462451 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
VAMP5-202ENST00000462451 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
VAMP5-202ENST00000462451 PDS5BQ9NTI5 1447 aa22.71■■□□□ 1.23
VAMP5-202ENST00000462451 KIF21AQ7Z4S6 1674 aa22.62■■□□□ 1.21
VAMP5-202ENST00000462451 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
VAMP5-202ENST00000462451 TRIM41Q8WV44 630 aa22.54■■□□□ 1.2
VAMP5-202ENST00000462451 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
VAMP5-202ENST00000462451 WDR62O43379 1518 aa22.43■■□□□ 1.18
VAMP5-202ENST00000462451 WIZO95785 1651 aa22.42■■□□□ 1.18
VAMP5-202ENST00000462451 CEP164Q9UPV0 1460 aa22.34■■□□□ 1.17
VAMP5-202ENST00000462451 FANCD2Q9BXW9 1451 aa22.33■■□□□ 1.16
VAMP5-202ENST00000462451 CFTRP13569 1480 aa22.28■■□□□ 1.16
VAMP5-202ENST00000462451 OSCARQ8IYS5 282 aa22.27■■□□□ 1.16
VAMP5-202ENST00000462451 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
VAMP5-202ENST00000462451 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
VAMP5-202ENST00000462451 TOP2AP11388 1531 aaKnown RBP22.11■■□□□ 1.13
VAMP5-202ENST00000462451 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
VAMP5-202ENST00000462451 CCDC88BA6NC98 1476 aa21.94■■□□□ 1.1
VAMP5-202ENST00000462451 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
VAMP5-202ENST00000462451 RIMBP3CA6NJZ7 1639 aa21.89■■□□□ 1.09
VAMP5-202ENST00000462451 RIMBP3BA6NNM3 1639 aa21.89■■□□□ 1.09
VAMP5-202ENST00000462451 RIMBP3Q9UFD9 1639 aa21.89■■□□□ 1.09
VAMP5-202ENST00000462451 TOPBP1Q92547 1522 aa21.86■■□□□ 1.09
VAMP5-202ENST00000462451 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
VAMP5-202ENST00000462451 PRDM2Q13029 1718 aa21.82■■□□□ 1.08
VAMP5-202ENST00000462451 CYB5RLQ6IPT4 315 aa21.79■■□□□ 1.08
VAMP5-202ENST00000462451 ABCC8Q09428 1581 aa21.78■■□□□ 1.08
VAMP5-202ENST00000462451 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.07
VAMP5-202ENST00000462451 EIF4G3O43432 1585 aaKnown RBP21.72■■□□□ 1.07
VAMP5-202ENST00000462451 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
VAMP5-202ENST00000462451 FBLN2P98095 1184 aa21.69■■□□□ 1.06
VAMP5-202ENST00000462451 TARBP1Q13395 1621 aaKnown RBP21.66■■□□□ 1.06
VAMP5-202ENST00000462451 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
VAMP5-202ENST00000462451 TRHP20396 242 aaPredicted RBP21.61■■□□□ 1.05
VAMP5-202ENST00000462451 ARAP1Q96P48 1450 aa21.6■■□□□ 1.05
VAMP5-202ENST00000462451 TDRD9Q8NDG6 1382 aaKnown RBP21.59■■□□□ 1.05
VAMP5-202ENST00000462451 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
VAMP5-202ENST00000462451 CHD1O14646 1710 aa21.58■■□□□ 1.05
VAMP5-202ENST00000462451 SOGA1O94964 1423 aa21.56■■□□□ 1.04
VAMP5-202ENST00000462451 CHMP7Q8WUX9 453 aaPredicted RBP21.47■■□□□ 1.03
VAMP5-202ENST00000462451 SNAPC4Q5SXM2 1469 aa21.46■■□□□ 1.03
VAMP5-202ENST00000462451 FGD5Q6ZNL6 1462 aa21.44■■□□□ 1.02
VAMP5-202ENST00000462451 CLASP1Q7Z460 1538 aa21.39■■□□□ 1.02
VAMP5-202ENST00000462451 CUX1P39880 1505 aa21.38■■□□□ 1.01
VAMP5-202ENST00000462451 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
VAMP5-202ENST00000462451 MAGI1Q96QZ7 1491 aaPredicted RBP21.37■■□□□ 1.01
VAMP5-202ENST00000462451 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
VAMP5-202ENST00000462451 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
VAMP5-202ENST00000462451 SYNJ2O15056 1496 aa21.32■■□□□ 1
VAMP5-202ENST00000462451 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
VAMP5-202ENST00000462451 AEBP2Q6ZN18 517 aaPredicted RBP21.18■□□□□ 0.98
VAMP5-202ENST00000462451 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
VAMP5-202ENST00000462451 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
VAMP5-202ENST00000462451 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
VAMP5-202ENST00000462451 GRIN2AQ12879 1464 aa21.08■□□□□ 0.97
VAMP5-202ENST00000462451 ERCC6L2Q5T890 1561 aa21.08■□□□□ 0.97
VAMP5-202ENST00000462451 SUPT5HO00267 1087 aaKnown RBP21.07■□□□□ 0.96
VAMP5-202ENST00000462451 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
VAMP5-202ENST00000462451 NUP160Q12769 1436 aa21.04■□□□□ 0.96
VAMP5-202ENST00000462451 CEP170Q5SW79 1584 aa21■□□□□ 0.95
VAMP5-202ENST00000462451 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
VAMP5-202ENST00000462451 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
VAMP5-202ENST00000462451 TOP2BQ02880 1626 aa20.92■□□□□ 0.94
VAMP5-202ENST00000462451 SHROOM2Q13796 1616 aa20.91■□□□□ 0.94
VAMP5-202ENST00000462451 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
VAMP5-202ENST00000462451 BIVM-ERCC5R4GMW8 1640 aa20.89■□□□□ 0.93
VAMP5-202ENST00000462451 ERICH3Q5RHP9 1530 aa20.88■□□□□ 0.93
VAMP5-202ENST00000462451 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
VAMP5-202ENST00000462451 FAM69CQ0P6D2 419 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms