RNA–Protein interactions for RNA: ENST00000462440.5

PRUNE1-208, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 5

Gene PRUNE1, Length 732 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-208ENST00000462440 NISCHQ9Y2I1 1504 aa40.96■■■■■ 4.15
PRUNE1-208ENST00000462440 CCDC180Q9P1Z9 1646 aa36.3■■■■□ 3.4
PRUNE1-208ENST00000462440 ABCC9O60706 1549 aa34.89■■■■□ 3.18
PRUNE1-208ENST00000462440 ZCCHC6Q5VYS8 1495 aaKnown RBP34.25■■■■□ 3.07
PRUNE1-208ENST00000462440 DCAF1Q9Y4B6 1507 aa33.91■■■■□ 3.02
PRUNE1-208ENST00000462440 NACADO15069 1562 aa33.9■■■■□ 3.02
PRUNE1-208ENST00000462440 DCAF8L2P0C7V8 631 aa33.89■■■■□ 3.02
PRUNE1-208ENST00000462440 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
PRUNE1-208ENST00000462440 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
PRUNE1-208ENST00000462440 UNC13AQ9UPW8 1703 aa33.25■■■□□ 2.91
PRUNE1-208ENST00000462440 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
PRUNE1-208ENST00000462440 BICRAQ9NZM4 1560 aa32.82■■■□□ 2.84
PRUNE1-208ENST00000462440 SHROOM4Q9ULL8 1493 aa32.65■■■□□ 2.82
PRUNE1-208ENST00000462440 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
PRUNE1-208ENST00000462440 EIF4G1Q04637 1599 aaKnown RBP31.89■■■□□ 2.7
PRUNE1-208ENST00000462440 CECR2Q9BXF3 1484 aa31.84■■■□□ 2.69
PRUNE1-208ENST00000462440 SMARCA4P51532 1647 aa31.74■■■□□ 2.67
PRUNE1-208ENST00000462440 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
PRUNE1-208ENST00000462440 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.66
PRUNE1-208ENST00000462440 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
PRUNE1-208ENST00000462440 DNAJC5BQ9UF47 199 aa31.46■■■□□ 2.63
PRUNE1-208ENST00000462440 PEG3Q9GZU2 1588 aa31.39■■■□□ 2.61
PRUNE1-208ENST00000462440 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
PRUNE1-208ENST00000462440 SMARCA2P51531 1590 aa31.36■■■□□ 2.61
PRUNE1-208ENST00000462440 WIZO95785 1651 aa31.35■■■□□ 2.61
PRUNE1-208ENST00000462440 ATAD2BQ9ULI0 1458 aa31.33■■■□□ 2.61
PRUNE1-208ENST00000462440 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
PRUNE1-208ENST00000462440 HMGXB3Q12766 1538 aa31.19■■■□□ 2.58
PRUNE1-208ENST00000462440 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
PRUNE1-208ENST00000462440 TOP2AP11388 1531 aaKnown RBP31■■■□□ 2.55
PRUNE1-208ENST00000462440 SUPT5HO00267 1087 aaKnown RBP30.93■■■□□ 2.54
PRUNE1-208ENST00000462440 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
PRUNE1-208ENST00000462440 LAMC3Q9Y6N6 1575 aa30.39■■■□□ 2.46
PRUNE1-208ENST00000462440 NESP48681 1621 aa30.37■■■□□ 2.45
PRUNE1-208ENST00000462440 PRDM2Q13029 1718 aa30.34■■■□□ 2.45
PRUNE1-208ENST00000462440 CADPSQ9ULU8 1353 aa30.31■■■□□ 2.44
PRUNE1-208ENST00000462440 CFTRP13569 1480 aa30.29■■■□□ 2.44
PRUNE1-208ENST00000462440 KIF21AQ7Z4S6 1674 aa30.15■■■□□ 2.42
PRUNE1-208ENST00000462440 PDS5BQ9NTI5 1447 aa30.07■■■□□ 2.4
PRUNE1-208ENST00000462440 FANCD2Q9BXW9 1451 aa30.02■■■□□ 2.4
PRUNE1-208ENST00000462440 ERCC6Q03468 1493 aa30.01■■■□□ 2.4
PRUNE1-208ENST00000462440 CEP164Q9UPV0 1460 aa29.94■■■□□ 2.38
PRUNE1-208ENST00000462440 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
PRUNE1-208ENST00000462440 MRC2Q9UBG0 1479 aa29.8■■■□□ 2.36
PRUNE1-208ENST00000462440 URB2Q14146 1524 aaKnown RBP29.71■■■□□ 2.35
PRUNE1-208ENST00000462440 WDR62O43379 1518 aa29.71■■■□□ 2.35
PRUNE1-208ENST00000462440 ABCC8Q09428 1581 aa29.69■■■□□ 2.34
PRUNE1-208ENST00000462440 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
PRUNE1-208ENST00000462440 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
PRUNE1-208ENST00000462440 CUX1P39880 1505 aa29.61■■■□□ 2.33
PRUNE1-208ENST00000462440 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
PRUNE1-208ENST00000462440 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
PRUNE1-208ENST00000462440 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
PRUNE1-208ENST00000462440 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
PRUNE1-208ENST00000462440 CUX2O14529 1486 aa29.5■■■□□ 2.31
PRUNE1-208ENST00000462440 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
PRUNE1-208ENST00000462440 POLA1P09884 1462 aaPredicted RBP29.4■■■□□ 2.3
PRUNE1-208ENST00000462440 TARBP1Q13395 1621 aaKnown RBP29.31■■■□□ 2.28
PRUNE1-208ENST00000462440 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
PRUNE1-208ENST00000462440 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
PRUNE1-208ENST00000462440 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
PRUNE1-208ENST00000462440 SOGA1O94964 1423 aa29.23■■■□□ 2.27
PRUNE1-208ENST00000462440 CHIC1Q5VXU3 224 aa29.18■■■□□ 2.26
PRUNE1-208ENST00000462440 TRIM41Q8WV44 630 aa29.17■■■□□ 2.26
PRUNE1-208ENST00000462440 ABCA10Q8WWZ4 1543 aa29.14■■■□□ 2.25
PRUNE1-208ENST00000462440 ZNF608Q9ULD9 1512 aaPredicted RBP29.12■■■□□ 2.25
PRUNE1-208ENST00000462440 EIF4G3O43432 1585 aaKnown RBP29.11■■■□□ 2.25
PRUNE1-208ENST00000462440 ABCA5Q8WWZ7 1642 aa29.06■■■□□ 2.24
PRUNE1-208ENST00000462440 PBRM1Q86U86 1689 aa29.02■■■□□ 2.24
PRUNE1-208ENST00000462440 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
PRUNE1-208ENST00000462440 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
PRUNE1-208ENST00000462440 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
PRUNE1-208ENST00000462440 KIF27Q86VH2 1401 aa28.89■■■□□ 2.22
PRUNE1-208ENST00000462440 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
PRUNE1-208ENST00000462440 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
PRUNE1-208ENST00000462440 ERICH3Q5RHP9 1530 aa28.82■■■□□ 2.2
PRUNE1-208ENST00000462440 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
PRUNE1-208ENST00000462440 MAGI1Q96QZ7 1491 aaPredicted RBP28.74■■■□□ 2.19
PRUNE1-208ENST00000462440 ADAMTS12P58397 1594 aa28.74■■■□□ 2.19
PRUNE1-208ENST00000462440 CUL7Q14999 1698 aa28.73■■■□□ 2.19
PRUNE1-208ENST00000462440 CHD1O14646 1710 aa28.72■■■□□ 2.19
PRUNE1-208ENST00000462440 EEA1Q15075 1411 aa28.69■■■□□ 2.18
PRUNE1-208ENST00000462440 IGF1RP08069 1367 aa28.68■■■□□ 2.18
PRUNE1-208ENST00000462440 SYNJ2O15056 1496 aa28.62■■■□□ 2.17
PRUNE1-208ENST00000462440 FHAD1B1AJZ9 1412 aa28.6■■■□□ 2.17
PRUNE1-208ENST00000462440 FAM9AQ8IZU1 332 aaPredicted RBP28.58■■■□□ 2.17
PRUNE1-208ENST00000462440 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
PRUNE1-208ENST00000462440 CSRNP3Q8WYN3 585 aa28.53■■■□□ 2.16
PRUNE1-208ENST00000462440 GRIN2AQ12879 1464 aa28.52■■■□□ 2.16
PRUNE1-208ENST00000462440 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
PRUNE1-208ENST00000462440 FBLN2P98095 1184 aa28.48■■■□□ 2.15
PRUNE1-208ENST00000462440 CHMP7Q8WUX9 453 aaPredicted RBP28.48■■■□□ 2.15
PRUNE1-208ENST00000462440 KIF21BO75037 1637 aa28.47■■■□□ 2.15
PRUNE1-208ENST00000462440 RAPGEF2Q9Y4G8 1499 aa28.46■■■□□ 2.15
PRUNE1-208ENST00000462440 CEP170Q5SW79 1584 aa28.41■■■□□ 2.14
PRUNE1-208ENST00000462440 CTTNBP2Q8WZ74 1663 aa28.35■■■□□ 2.13
PRUNE1-208ENST00000462440 NUP160Q12769 1436 aa28.35■■■□□ 2.13
PRUNE1-208ENST00000462440 CLASP1Q7Z460 1538 aa28.31■■■□□ 2.12
PRUNE1-208ENST00000462440 OSCARQ8IYS5 282 aa28.29■■■□□ 2.12
PRUNE1-208ENST00000462440 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms