RNA–Protein interactions for RNA: ENST00000462391.5

NPM3-202, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 3

Gene NPM3, Length 481 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-202ENST00000462391 NISCHQ9Y2I1 1504 aa52.37■■■■■ 5.97
NPM3-202ENST00000462391 CCDC180Q9P1Z9 1646 aa46.8■■■■■ 5.08
NPM3-202ENST00000462391 ABCC9O60706 1549 aa46.09■■■■■ 4.97
NPM3-202ENST00000462391 RB1CC1Q8TDY2 1594 aa44.24■■■■■ 4.67
NPM3-202ENST00000462391 NACADO15069 1562 aa44.09■■■■■ 4.65
NPM3-202ENST00000462391 DCAF8L2P0C7V8 631 aa43.83■■■■■ 4.61
NPM3-202ENST00000462391 MYO15BQ96JP2 1530 aa43.73■■■■■ 4.59
NPM3-202ENST00000462391 ZCCHC6Q5VYS8 1495 aaKnown RBP43.53■■■■■ 4.56
NPM3-202ENST00000462391 DCAF1Q9Y4B6 1507 aa43.37■■■■■ 4.53
NPM3-202ENST00000462391 UNC13AQ9UPW8 1703 aa43.17■■■■■ 4.5
NPM3-202ENST00000462391 PABPN1Q86U42 306 aaKnown RBP eCLIP42.96■■■■■ 4.47
NPM3-202ENST00000462391 BICRAQ9NZM4 1560 aa42.86■■■■■ 4.45
NPM3-202ENST00000462391 DNAJC5BQ9UF47 199 aa42.64■■■■■ 4.42
NPM3-202ENST00000462391 SCRIBQ14160 1630 aa42.57■■■■■ 4.41
NPM3-202ENST00000462391 SHROOM4Q9ULL8 1493 aa42.5■■■■■ 4.39
NPM3-202ENST00000462391 EIF4G1Q04637 1599 aaKnown RBP41.79■■■■■ 4.28
NPM3-202ENST00000462391 CC2D2AQ9P2K1 1620 aa41.71■■■■■ 4.27
NPM3-202ENST00000462391 CECR2Q9BXF3 1484 aa41.5■■■■■ 4.23
NPM3-202ENST00000462391 SMARCA4P51532 1647 aa40.72■■■■■ 4.11
NPM3-202ENST00000462391 NCAPD3P42695 1498 aa40.68■■■■■ 4.1
NPM3-202ENST00000462391 BAZ1AQ9NRL2 1556 aaPredicted RBP40.65■■■■■ 4.1
NPM3-202ENST00000462391 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
NPM3-202ENST00000462391 SMARCA2P51531 1590 aa40.58■■■■■ 4.09
NPM3-202ENST00000462391 HMGXB3Q12766 1538 aa40.46■■■■■ 4.07
NPM3-202ENST00000462391 PEG3Q9GZU2 1588 aa40.37■■■■■ 4.05
NPM3-202ENST00000462391 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
NPM3-202ENST00000462391 BAZ1BQ9UIG0 1483 aaKnown RBP40.26■■■■■ 4.03
NPM3-202ENST00000462391 WIZO95785 1651 aa39.84■■■■□ 3.97
NPM3-202ENST00000462391 ERCC6Q03468 1493 aa39.81■■■■□ 3.96
NPM3-202ENST00000462391 NESP48681 1621 aa39.74■■■■□ 3.95
NPM3-202ENST00000462391 RSF1Q96T23 1441 aaPredicted RBP39.71■■■■□ 3.95
NPM3-202ENST00000462391 LAMC3Q9Y6N6 1575 aa39.68■■■■□ 3.94
NPM3-202ENST00000462391 CUX2O14529 1486 aa39.58■■■■□ 3.93
NPM3-202ENST00000462391 CADPSQ9ULU8 1353 aa39.46■■■■□ 3.91
NPM3-202ENST00000462391 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
NPM3-202ENST00000462391 PDS5BQ9NTI5 1447 aa39.43■■■■□ 3.9
NPM3-202ENST00000462391 THOC2Q8NI27 1593 aaKnown RBP39.29■■■■□ 3.88
NPM3-202ENST00000462391 KIF21AQ7Z4S6 1674 aa39.29■■■■□ 3.88
NPM3-202ENST00000462391 CFTRP13569 1480 aa39.13■■■■□ 3.85
NPM3-202ENST00000462391 MRC2Q9UBG0 1479 aa39.03■■■■□ 3.84
NPM3-202ENST00000462391 CEP164Q9UPV0 1460 aa39■■■■□ 3.83
NPM3-202ENST00000462391 FANCD2Q9BXW9 1451 aa38.98■■■■□ 3.83
NPM3-202ENST00000462391 CCDC88BA6NC98 1476 aa38.96■■■■□ 3.83
NPM3-202ENST00000462391 WDR62O43379 1518 aa38.93■■■■□ 3.82
NPM3-202ENST00000462391 PRDM2Q13029 1718 aa38.83■■■■□ 3.81
NPM3-202ENST00000462391 DNAJC5Q9H3Z4 198 aa38.82■■■■□ 3.8
NPM3-202ENST00000462391 URB2Q14146 1524 aaKnown RBP38.6■■■■□ 3.77
NPM3-202ENST00000462391 ABCC8Q09428 1581 aa38.36■■■■□ 3.73
NPM3-202ENST00000462391 SUPT5HO00267 1087 aaKnown RBP38.32■■■■□ 3.72
NPM3-202ENST00000462391 TOPBP1Q92547 1522 aa38.32■■■■□ 3.72
NPM3-202ENST00000462391 DNMBPQ6XZF7 1577 aa38.26■■■■□ 3.72
NPM3-202ENST00000462391 IFT140Q96RY7 1462 aa38.21■■■■□ 3.71
NPM3-202ENST00000462391 ZNF608Q9ULD9 1512 aaPredicted RBP38.01■■■■□ 3.67
NPM3-202ENST00000462391 POLA1P09884 1462 aaPredicted RBP37.96■■■■□ 3.67
NPM3-202ENST00000462391 TARBP1Q13395 1621 aaKnown RBP37.94■■■■□ 3.66
NPM3-202ENST00000462391 EIF4G3O43432 1585 aaKnown RBP37.88■■■■□ 3.65
NPM3-202ENST00000462391 CUX1P39880 1505 aa37.85■■■■□ 3.65
NPM3-202ENST00000462391 OSCARQ8IYS5 282 aa37.83■■■■□ 3.65
NPM3-202ENST00000462391 SOGA1O94964 1423 aa37.8■■■■□ 3.64
NPM3-202ENST00000462391 FGD5Q6ZNL6 1462 aa37.8■■■■□ 3.64
NPM3-202ENST00000462391 RAD54L2Q9Y4B4 1467 aa37.76■■■■□ 3.63
NPM3-202ENST00000462391 AQRO60306 1485 aaKnown RBP eCLIP37.74■■■■□ 3.63
NPM3-202ENST00000462391 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
NPM3-202ENST00000462391 TDRD9Q8NDG6 1382 aaKnown RBP37.6■■■■□ 3.61
NPM3-202ENST00000462391 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.59
NPM3-202ENST00000462391 CHD1O14646 1710 aa37.47■■■■□ 3.59
NPM3-202ENST00000462391 TOP2BQ02880 1626 aa37.45■■■■□ 3.59
NPM3-202ENST00000462391 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
NPM3-202ENST00000462391 ABCA10Q8WWZ4 1543 aa37.45■■■■□ 3.59
NPM3-202ENST00000462391 GRIN2BQ13224 1484 aa37.44■■■■□ 3.58
NPM3-202ENST00000462391 SNAPC4Q5SXM2 1469 aa37.4■■■■□ 3.58
NPM3-202ENST00000462391 MAGI1Q96QZ7 1491 aaPredicted RBP37.4■■■■□ 3.58
NPM3-202ENST00000462391 SYNJ1O43426 1573 aa37.38■■■■□ 3.57
NPM3-202ENST00000462391 FBLN2P98095 1184 aa37.37■■■■□ 3.57
NPM3-202ENST00000462391 GAPVD1Q14C86 1478 aa37.37■■■■□ 3.57
NPM3-202ENST00000462391 ABCA5Q8WWZ7 1642 aa37.32■■■■□ 3.57
NPM3-202ENST00000462391 PBRM1Q86U86 1689 aa37.31■■■■□ 3.56
NPM3-202ENST00000462391 TRIM41Q8WV44 630 aa37.29■■■■□ 3.56
NPM3-202ENST00000462391 RIMBP3CA6NJZ7 1639 aa37.25■■■■□ 3.55
NPM3-202ENST00000462391 RIMBP3BA6NNM3 1639 aa37.25■■■■□ 3.55
NPM3-202ENST00000462391 RIMBP3Q9UFD9 1639 aa37.25■■■■□ 3.55
NPM3-202ENST00000462391 CHMP7Q8WUX9 453 aaPredicted RBP37.24■■■■□ 3.55
NPM3-202ENST00000462391 SYNJ2O15056 1496 aa37.24■■■■□ 3.55
NPM3-202ENST00000462391 ARHGEF11O15085 1522 aa37.21■■■■□ 3.55
NPM3-202ENST00000462391 CLASP1Q7Z460 1538 aa37.08■■■■□ 3.53
NPM3-202ENST00000462391 ERICH3Q5RHP9 1530 aa37■■■■□ 3.51
NPM3-202ENST00000462391 ADAMTS12P58397 1594 aa37■■■■□ 3.51
NPM3-202ENST00000462391 GRIN2AQ12879 1464 aa36.94■■■■□ 3.5
NPM3-202ENST00000462391 FHAD1B1AJZ9 1412 aa36.93■■■■□ 3.5
NPM3-202ENST00000462391 ARAP1Q96P48 1450 aa36.87■■■■□ 3.49
NPM3-202ENST00000462391 CYB5RLQ6IPT4 315 aa36.85■■■■□ 3.49
NPM3-202ENST00000462391 NUP160Q12769 1436 aa36.8■■■■□ 3.48
NPM3-202ENST00000462391 KIF27Q86VH2 1401 aa36.75■■■■□ 3.47
NPM3-202ENST00000462391 CEP170Q5SW79 1584 aa36.74■■■■□ 3.47
NPM3-202ENST00000462391 IGF1RP08069 1367 aa36.61■■■■□ 3.45
NPM3-202ENST00000462391 CUL7Q14999 1698 aa36.6■■■■□ 3.45
NPM3-202ENST00000462391 SHROOM2Q13796 1616 aa36.58■■■■□ 3.45
NPM3-202ENST00000462391 ERCC6L2Q5T890 1561 aa36.47■■■■□ 3.43
NPM3-202ENST00000462391 RUSC2Q8N2Y8 1516 aa36.46■■■■□ 3.43
NPM3-202ENST00000462391 CARMIL1Q5VZK9 1371 aa36.4■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms