RNA–Protein interactions for RNA: ENST00000462353.1

RAB3GAP2-203, Transcript of RAB3 GTPase activating non-catalytic protein subunit 2, humanhuman

TSL 1 (best)

Gene RAB3GAP2, Length 1,906 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2-203ENST00000462353 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
RAB3GAP2-203ENST00000462353 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
RAB3GAP2-203ENST00000462353 ABCC9O60706 1549 aa19.09■□□□□ 0.65
RAB3GAP2-203ENST00000462353 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
RAB3GAP2-203ENST00000462353 DCAF8L2P0C7V8 631 aa18.65■□□□□ 0.58
RAB3GAP2-203ENST00000462353 DCAF1Q9Y4B6 1507 aa18.56■□□□□ 0.56
RAB3GAP2-203ENST00000462353 NACADO15069 1562 aa18.48■□□□□ 0.55
RAB3GAP2-203ENST00000462353 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
RAB3GAP2-203ENST00000462353 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
RAB3GAP2-203ENST00000462353 SCRIBQ14160 1630 aa18.19■□□□□ 0.5
RAB3GAP2-203ENST00000462353 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
RAB3GAP2-203ENST00000462353 UNC13AQ9UPW8 1703 aa18.17■□□□□ 0.5
RAB3GAP2-203ENST00000462353 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
RAB3GAP2-203ENST00000462353 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
RAB3GAP2-203ENST00000462353 BICRAQ9NZM4 1560 aa17.97■□□□□ 0.47
RAB3GAP2-203ENST00000462353 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
RAB3GAP2-203ENST00000462353 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
RAB3GAP2-203ENST00000462353 EIF4G1Q04637 1599 aaKnown RBP17.42■□□□□ 0.38
RAB3GAP2-203ENST00000462353 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
RAB3GAP2-203ENST00000462353 SMARCA4P51532 1647 aa17.39■□□□□ 0.38
RAB3GAP2-203ENST00000462353 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
RAB3GAP2-203ENST00000462353 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
RAB3GAP2-203ENST00000462353 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
RAB3GAP2-203ENST00000462353 WIZO95785 1651 aa17.26■□□□□ 0.35
RAB3GAP2-203ENST00000462353 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
RAB3GAP2-203ENST00000462353 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
RAB3GAP2-203ENST00000462353 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
RAB3GAP2-203ENST00000462353 PEG3Q9GZU2 1588 aa17.18■□□□□ 0.34
RAB3GAP2-203ENST00000462353 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
RAB3GAP2-203ENST00000462353 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
RAB3GAP2-203ENST00000462353 BAZ1BQ9UIG0 1483 aaKnown RBP17.04■□□□□ 0.32
RAB3GAP2-203ENST00000462353 HMGXB3Q12766 1538 aa17.03■□□□□ 0.32
RAB3GAP2-203ENST00000462353 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
RAB3GAP2-203ENST00000462353 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
RAB3GAP2-203ENST00000462353 NESP48681 1621 aa16.68■□□□□ 0.26
RAB3GAP2-203ENST00000462353 CFTRP13569 1480 aa16.6■□□□□ 0.25
RAB3GAP2-203ENST00000462353 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
RAB3GAP2-203ENST00000462353 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
RAB3GAP2-203ENST00000462353 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
RAB3GAP2-203ENST00000462353 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
RAB3GAP2-203ENST00000462353 FANCD2Q9BXW9 1451 aa16.44■□□□□ 0.22
RAB3GAP2-203ENST00000462353 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
RAB3GAP2-203ENST00000462353 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
RAB3GAP2-203ENST00000462353 CEP164Q9UPV0 1460 aa16.36■□□□□ 0.21
RAB3GAP2-203ENST00000462353 ERCC6Q03468 1493 aa16.33■□□□□ 0.21
RAB3GAP2-203ENST00000462353 SYNJ1O43426 1573 aa16.31■□□□□ 0.2
RAB3GAP2-203ENST00000462353 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
RAB3GAP2-203ENST00000462353 CUX1P39880 1505 aa16.3■□□□□ 0.2
RAB3GAP2-203ENST00000462353 THOC2Q8NI27 1593 aaKnown RBP16.29■□□□□ 0.2
RAB3GAP2-203ENST00000462353 WRNQ14191 1432 aaPredicted RBP eCLIP16.27■□□□□ 0.2
RAB3GAP2-203ENST00000462353 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
RAB3GAP2-203ENST00000462353 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
RAB3GAP2-203ENST00000462353 DNMBPQ6XZF7 1577 aa16.22■□□□□ 0.19
RAB3GAP2-203ENST00000462353 TOP2BQ02880 1626 aa16.21■□□□□ 0.19
RAB3GAP2-203ENST00000462353 BIVM-ERCC5R4GMW8 1640 aa16.21■□□□□ 0.19
RAB3GAP2-203ENST00000462353 WDR62O43379 1518 aa16.21■□□□□ 0.19
RAB3GAP2-203ENST00000462353 FGD5Q6ZNL6 1462 aa16.15■□□□□ 0.18
RAB3GAP2-203ENST00000462353 POLA1P09884 1462 aaPredicted RBP16.14■□□□□ 0.17
RAB3GAP2-203ENST00000462353 TRIM41Q8WV44 630 aa16.13■□□□□ 0.17
RAB3GAP2-203ENST00000462353 CUX2O14529 1486 aa16.11■□□□□ 0.17
RAB3GAP2-203ENST00000462353 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
RAB3GAP2-203ENST00000462353 TARBP1Q13395 1621 aaKnown RBP16.05■□□□□ 0.16
RAB3GAP2-203ENST00000462353 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
RAB3GAP2-203ENST00000462353 SOGA1O94964 1423 aa16.02■□□□□ 0.16
RAB3GAP2-203ENST00000462353 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.16
RAB3GAP2-203ENST00000462353 RUSC2Q8N2Y8 1516 aa16.01■□□□□ 0.15
RAB3GAP2-203ENST00000462353 ZNF608Q9ULD9 1512 aaPredicted RBP16■□□□□ 0.15
RAB3GAP2-203ENST00000462353 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
RAB3GAP2-203ENST00000462353 IFT140Q96RY7 1462 aa15.97■□□□□ 0.15
RAB3GAP2-203ENST00000462353 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
RAB3GAP2-203ENST00000462353 AQRO60306 1485 aaKnown RBP eCLIP15.93■□□□□ 0.14
RAB3GAP2-203ENST00000462353 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
RAB3GAP2-203ENST00000462353 EIF4G3O43432 1585 aaKnown RBP15.92■□□□□ 0.14
RAB3GAP2-203ENST00000462353 FAM9AQ8IZU1 332 aaPredicted RBP15.9■□□□□ 0.14
RAB3GAP2-203ENST00000462353 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
RAB3GAP2-203ENST00000462353 KIF27Q86VH2 1401 aa15.86■□□□□ 0.13
RAB3GAP2-203ENST00000462353 PBRM1Q86U86 1689 aa15.85■□□□□ 0.13
RAB3GAP2-203ENST00000462353 IGF1RP08069 1367 aa15.8■□□□□ 0.12
RAB3GAP2-203ENST00000462353 GRIN2BQ13224 1484 aa15.77■□□□□ 0.12
RAB3GAP2-203ENST00000462353 ERICH3Q5RHP9 1530 aa15.77■□□□□ 0.12
RAB3GAP2-203ENST00000462353 SNAPC4Q5SXM2 1469 aa15.77■□□□□ 0.11
RAB3GAP2-203ENST00000462353 EEA1Q15075 1411 aa15.76■□□□□ 0.11
RAB3GAP2-203ENST00000462353 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
RAB3GAP2-203ENST00000462353 ADAMTS12P58397 1594 aa15.74■□□□□ 0.11
RAB3GAP2-203ENST00000462353 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
RAB3GAP2-203ENST00000462353 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
RAB3GAP2-203ENST00000462353 CUL7Q14999 1698 aa15.7■□□□□ 0.1
RAB3GAP2-203ENST00000462353 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
RAB3GAP2-203ENST00000462353 CARMIL1Q5VZK9 1371 aa15.69■□□□□ 0.1
RAB3GAP2-203ENST00000462353 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
RAB3GAP2-203ENST00000462353 KIF21BO75037 1637 aa15.66■□□□□ 0.1
RAB3GAP2-203ENST00000462353 CHD1O14646 1710 aa15.66■□□□□ 0.1
RAB3GAP2-203ENST00000462353 LOC105371045A0A1W2PR82 267 aa15.66■□□□□ 0.1
RAB3GAP2-203ENST00000462353 FHAD1B1AJZ9 1412 aa15.66■□□□□ 0.1
RAB3GAP2-203ENST00000462353 SYNJ2O15056 1496 aa15.64■□□□□ 0.09
RAB3GAP2-203ENST00000462353 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
RAB3GAP2-203ENST00000462353 FBLN2P98095 1184 aa15.61■□□□□ 0.09
RAB3GAP2-203ENST00000462353 GOLGA3Q08378 1498 aa15.58■□□□□ 0.08
RAB3GAP2-203ENST00000462353 CHMP7Q8WUX9 453 aaPredicted RBP15.58■□□□□ 0.08
RAB3GAP2-203ENST00000462353 CEP170Q5SW79 1584 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms