RNA–Protein interactions for RNA: ENST00000462340.1

SLC25A48-205, Transcript of solute carrier family 25 member 48, humanhuman

TSL 3

Gene SLC25A48, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A48-205ENST00000462340 NISCHQ9Y2I1 1504 aa46.97■■■■■ 5.11
SLC25A48-205ENST00000462340 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
SLC25A48-205ENST00000462340 ABCC9O60706 1549 aa41.03■■■■■ 4.16
SLC25A48-205ENST00000462340 RB1CC1Q8TDY2 1594 aa39.53■■■■□ 3.92
SLC25A48-205ENST00000462340 NACADO15069 1562 aa39.46■■■■□ 3.91
SLC25A48-205ENST00000462340 MYO15BQ96JP2 1530 aa39.24■■■■□ 3.87
SLC25A48-205ENST00000462340 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
SLC25A48-205ENST00000462340 ZCCHC6Q5VYS8 1495 aaKnown RBP39.07■■■■□ 3.85
SLC25A48-205ENST00000462340 DCAF1Q9Y4B6 1507 aa38.96■■■■□ 3.83
SLC25A48-205ENST00000462340 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
SLC25A48-205ENST00000462340 PABPN1Q86U42 306 aaKnown RBP eCLIP38.28■■■■□ 3.72
SLC25A48-205ENST00000462340 BICRAQ9NZM4 1560 aa38.24■■■■□ 3.71
SLC25A48-205ENST00000462340 SCRIBQ14160 1630 aa38.05■■■■□ 3.68
SLC25A48-205ENST00000462340 SHROOM4Q9ULL8 1493 aa38.04■■■■□ 3.68
SLC25A48-205ENST00000462340 DNAJC5BQ9UF47 199 aa37.8■■■■□ 3.64
SLC25A48-205ENST00000462340 EIF4G1Q04637 1599 aaKnown RBP37.29■■■■□ 3.56
SLC25A48-205ENST00000462340 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
SLC25A48-205ENST00000462340 CECR2Q9BXF3 1484 aa36.96■■■■□ 3.51
SLC25A48-205ENST00000462340 SMARCA4P51532 1647 aa36.47■■■■□ 3.43
SLC25A48-205ENST00000462340 BAZ1AQ9NRL2 1556 aaPredicted RBP36.45■■■■□ 3.43
SLC25A48-205ENST00000462340 NCAPD3P42695 1498 aa36.4■■■■□ 3.42
SLC25A48-205ENST00000462340 SMARCA2P51531 1590 aa36.35■■■■□ 3.41
SLC25A48-205ENST00000462340 ATAD2BQ9ULI0 1458 aa36.33■■■■□ 3.41
SLC25A48-205ENST00000462340 HMGXB3Q12766 1538 aa36.2■■■■□ 3.39
SLC25A48-205ENST00000462340 PEG3Q9GZU2 1588 aa36.19■■■■□ 3.38
SLC25A48-205ENST00000462340 MROH2BQ7Z745 1585 aa36.11■■■■□ 3.37
SLC25A48-205ENST00000462340 BAZ1BQ9UIG0 1483 aaKnown RBP36.03■■■■□ 3.36
SLC25A48-205ENST00000462340 WIZO95785 1651 aa35.71■■■■□ 3.31
SLC25A48-205ENST00000462340 RSF1Q96T23 1441 aaPredicted RBP35.67■■■■□ 3.3
SLC25A48-205ENST00000462340 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
SLC25A48-205ENST00000462340 ERCC6Q03468 1493 aa35.46■■■■□ 3.27
SLC25A48-205ENST00000462340 NESP48681 1621 aa35.42■■■■□ 3.26
SLC25A48-205ENST00000462340 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
SLC25A48-205ENST00000462340 CADPSQ9ULU8 1353 aa35.31■■■■□ 3.24
SLC25A48-205ENST00000462340 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.24
SLC25A48-205ENST00000462340 CUX2O14529 1486 aa35.23■■■■□ 3.23
SLC25A48-205ENST00000462340 CFTRP13569 1480 aa35.06■■■■□ 3.2
SLC25A48-205ENST00000462340 KIF21AQ7Z4S6 1674 aa35.04■■■■□ 3.2
SLC25A48-205ENST00000462340 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
SLC25A48-205ENST00000462340 CCDC88BA6NC98 1476 aa34.95■■■■□ 3.19
SLC25A48-205ENST00000462340 FANCD2Q9BXW9 1451 aa34.86■■■■□ 3.17
SLC25A48-205ENST00000462340 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
SLC25A48-205ENST00000462340 CEP164Q9UPV0 1460 aa34.85■■■■□ 3.17
SLC25A48-205ENST00000462340 PRDM2Q13029 1718 aa34.78■■■■□ 3.16
SLC25A48-205ENST00000462340 WDR62O43379 1518 aa34.75■■■■□ 3.15
SLC25A48-205ENST00000462340 SUPT5HO00267 1087 aaKnown RBP34.54■■■■□ 3.12
SLC25A48-205ENST00000462340 URB2Q14146 1524 aaKnown RBP34.48■■■■□ 3.11
SLC25A48-205ENST00000462340 ABCC8Q09428 1581 aa34.4■■■■□ 3.1
SLC25A48-205ENST00000462340 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
SLC25A48-205ENST00000462340 TOPBP1Q92547 1522 aa34.28■■■■□ 3.08
SLC25A48-205ENST00000462340 DNMBPQ6XZF7 1577 aa34.25■■■■□ 3.07
SLC25A48-205ENST00000462340 IFT140Q96RY7 1462 aa34.17■■■■□ 3.06
SLC25A48-205ENST00000462340 POLA1P09884 1462 aaPredicted RBP33.96■■■■□ 3.03
SLC25A48-205ENST00000462340 TARBP1Q13395 1621 aaKnown RBP33.91■■■■□ 3.02
SLC25A48-205ENST00000462340 CUX1P39880 1505 aa33.9■■■■□ 3.02
SLC25A48-205ENST00000462340 ZNF608Q9ULD9 1512 aaPredicted RBP33.9■■■■□ 3.02
SLC25A48-205ENST00000462340 SOGA1O94964 1423 aa33.85■■■■□ 3.01
SLC25A48-205ENST00000462340 FGD5Q6ZNL6 1462 aa33.84■■■■□ 3.01
SLC25A48-205ENST00000462340 EIF4G3O43432 1585 aaKnown RBP33.81■■■■□ 3
SLC25A48-205ENST00000462340 WDR97A6NE52 1622 aa33.79■■■■□ 3
SLC25A48-205ENST00000462340 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
SLC25A48-205ENST00000462340 OSCARQ8IYS5 282 aa33.73■■■□□ 2.99
SLC25A48-205ENST00000462340 AQRO60306 1485 aaKnown RBP eCLIP33.71■■■□□ 2.99
SLC25A48-205ENST00000462340 WRNQ14191 1432 aaPredicted RBP eCLIP33.68■■■□□ 2.98
SLC25A48-205ENST00000462340 TOP2BQ02880 1626 aa33.63■■■□□ 2.97
SLC25A48-205ENST00000462340 TDRD9Q8NDG6 1382 aaKnown RBP33.62■■■□□ 2.97
SLC25A48-205ENST00000462340 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
SLC25A48-205ENST00000462340 ABCA10Q8WWZ4 1543 aa33.57■■■□□ 2.96
SLC25A48-205ENST00000462340 SYNJ1O43426 1573 aa33.52■■■□□ 2.96
SLC25A48-205ENST00000462340 GRIN2BQ13224 1484 aa33.5■■■□□ 2.95
SLC25A48-205ENST00000462340 GAPVD1Q14C86 1478 aa33.46■■■□□ 2.95
SLC25A48-205ENST00000462340 MAGI1Q96QZ7 1491 aaPredicted RBP33.46■■■□□ 2.95
SLC25A48-205ENST00000462340 SNAPC4Q5SXM2 1469 aa33.41■■■□□ 2.94
SLC25A48-205ENST00000462340 ABCA5Q8WWZ7 1642 aa33.41■■■□□ 2.94
SLC25A48-205ENST00000462340 CHD1O14646 1710 aa33.4■■■□□ 2.94
SLC25A48-205ENST00000462340 PBRM1Q86U86 1689 aa33.36■■■□□ 2.93
SLC25A48-205ENST00000462340 FBLN2P98095 1184 aa33.36■■■□□ 2.93
SLC25A48-205ENST00000462340 SYNJ2O15056 1496 aa33.31■■■□□ 2.92
SLC25A48-205ENST00000462340 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
SLC25A48-205ENST00000462340 ERICH3Q5RHP9 1530 aa33.19■■■□□ 2.9
SLC25A48-205ENST00000462340 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
SLC25A48-205ENST00000462340 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
SLC25A48-205ENST00000462340 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
SLC25A48-205ENST00000462340 ARHGEF11O15085 1522 aa33.11■■■□□ 2.89
SLC25A48-205ENST00000462340 FHAD1B1AJZ9 1412 aa33.1■■■□□ 2.89
SLC25A48-205ENST00000462340 ADAMTS12P58397 1594 aa33.09■■■□□ 2.89
SLC25A48-205ENST00000462340 CLASP1Q7Z460 1538 aa33.08■■■□□ 2.89
SLC25A48-205ENST00000462340 GRIN2AQ12879 1464 aa33.04■■■□□ 2.88
SLC25A48-205ENST00000462340 KIF27Q86VH2 1401 aa33.02■■■□□ 2.88
SLC25A48-205ENST00000462340 TRIM41Q8WV44 630 aa33.01■■■□□ 2.87
SLC25A48-205ENST00000462340 NUP160Q12769 1436 aa32.93■■■□□ 2.86
SLC25A48-205ENST00000462340 IGF1RP08069 1367 aa32.88■■■□□ 2.85
SLC25A48-205ENST00000462340 CUL7Q14999 1698 aa32.84■■■□□ 2.85
SLC25A48-205ENST00000462340 CEP170Q5SW79 1584 aa32.83■■■□□ 2.85
SLC25A48-205ENST00000462340 ARAP1Q96P48 1450 aa32.8■■■□□ 2.84
SLC25A48-205ENST00000462340 CYB5RLQ6IPT4 315 aa32.8■■■□□ 2.84
SLC25A48-205ENST00000462340 SHROOM2Q13796 1616 aa32.69■■■□□ 2.82
SLC25A48-205ENST00000462340 CARMIL1Q5VZK9 1371 aa32.69■■■□□ 2.82
SLC25A48-205ENST00000462340 RUSC2Q8N2Y8 1516 aa32.61■■■□□ 2.81
SLC25A48-205ENST00000462340 JPH4Q96JJ6 628 aa32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms