RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.03
PCOLCE-203ENST00000462260 CCDC180Q9P1Z9 1646 aa30.32■■■□□ 2.44
PCOLCE-203ENST00000462260 ABCC9O60706 1549 aa29.98■■■□□ 2.39
PCOLCE-203ENST00000462260 RB1CC1Q8TDY2 1594 aa28.71■■■□□ 2.19
PCOLCE-203ENST00000462260 NACADO15069 1562 aa28.6■■■□□ 2.17
PCOLCE-203ENST00000462260 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
PCOLCE-203ENST00000462260 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
PCOLCE-203ENST00000462260 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
PCOLCE-203ENST00000462260 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
PCOLCE-203ENST00000462260 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
PCOLCE-203ENST00000462260 PABPN1Q86U42 306 aaKnown RBP eCLIP27.96■■■□□ 2.07
PCOLCE-203ENST00000462260 BICRAQ9NZM4 1560 aa27.86■■■□□ 2.05
PCOLCE-203ENST00000462260 DNAJC5BQ9UF47 199 aa27.86■■■□□ 2.05
PCOLCE-203ENST00000462260 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
PCOLCE-203ENST00000462260 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
PCOLCE-203ENST00000462260 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
PCOLCE-203ENST00000462260 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
PCOLCE-203ENST00000462260 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
PCOLCE-203ENST00000462260 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
PCOLCE-203ENST00000462260 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
PCOLCE-203ENST00000462260 ATAD2BQ9ULI0 1458 aa26.36■■□□□ 1.81
PCOLCE-203ENST00000462260 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.81
PCOLCE-203ENST00000462260 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
PCOLCE-203ENST00000462260 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
PCOLCE-203ENST00000462260 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
PCOLCE-203ENST00000462260 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
PCOLCE-203ENST00000462260 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
PCOLCE-203ENST00000462260 NESP48681 1621 aa25.86■■□□□ 1.73
PCOLCE-203ENST00000462260 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
PCOLCE-203ENST00000462260 WIZO95785 1651 aa25.85■■□□□ 1.73
PCOLCE-203ENST00000462260 RSF1Q96T23 1441 aaPredicted RBP25.75■■□□□ 1.71
PCOLCE-203ENST00000462260 LAMC3Q9Y6N6 1575 aa25.74■■□□□ 1.71
PCOLCE-203ENST00000462260 CUX2O14529 1486 aa25.73■■□□□ 1.71
PCOLCE-203ENST00000462260 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
PCOLCE-203ENST00000462260 PDS5BQ9NTI5 1447 aa25.58■■□□□ 1.69
PCOLCE-203ENST00000462260 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
PCOLCE-203ENST00000462260 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
PCOLCE-203ENST00000462260 KIF21AQ7Z4S6 1674 aa25.53■■□□□ 1.68
PCOLCE-203ENST00000462260 CFTRP13569 1480 aa25.4■■□□□ 1.66
PCOLCE-203ENST00000462260 DNAJC5Q9H3Z4 198 aa25.34■■□□□ 1.65
PCOLCE-203ENST00000462260 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
PCOLCE-203ENST00000462260 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
PCOLCE-203ENST00000462260 CEP164Q9UPV0 1460 aa25.3■■□□□ 1.64
PCOLCE-203ENST00000462260 WDR62O43379 1518 aa25.27■■□□□ 1.64
PCOLCE-203ENST00000462260 CCDC88BA6NC98 1476 aa25.27■■□□□ 1.64
PCOLCE-203ENST00000462260 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
PCOLCE-203ENST00000462260 URB2Q14146 1524 aaKnown RBP25.08■■□□□ 1.61
PCOLCE-203ENST00000462260 TOPBP1Q92547 1522 aa24.87■■□□□ 1.57
PCOLCE-203ENST00000462260 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
PCOLCE-203ENST00000462260 DNMBPQ6XZF7 1577 aa24.8■■□□□ 1.56
PCOLCE-203ENST00000462260 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
PCOLCE-203ENST00000462260 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
PCOLCE-203ENST00000462260 ZNF608Q9ULD9 1512 aaPredicted RBP24.71■■□□□ 1.55
PCOLCE-203ENST00000462260 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
PCOLCE-203ENST00000462260 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.53
PCOLCE-203ENST00000462260 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
PCOLCE-203ENST00000462260 EIF4G3O43432 1585 aaKnown RBP24.59■■□□□ 1.53
PCOLCE-203ENST00000462260 CUX1P39880 1505 aa24.56■■□□□ 1.52
PCOLCE-203ENST00000462260 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.52
PCOLCE-203ENST00000462260 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
PCOLCE-203ENST00000462260 SOGA1O94964 1423 aa24.52■■□□□ 1.52
PCOLCE-203ENST00000462260 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
PCOLCE-203ENST00000462260 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
PCOLCE-203ENST00000462260 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
PCOLCE-203ENST00000462260 CHD1O14646 1710 aa24.33■■□□□ 1.49
PCOLCE-203ENST00000462260 TRIM41Q8WV44 630 aa24.32■■□□□ 1.48
PCOLCE-203ENST00000462260 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
PCOLCE-203ENST00000462260 SNAPC4Q5SXM2 1469 aa24.28■■□□□ 1.48
PCOLCE-203ENST00000462260 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
PCOLCE-203ENST00000462260 FBLN2P98095 1184 aa24.27■■□□□ 1.48
PCOLCE-203ENST00000462260 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
PCOLCE-203ENST00000462260 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
PCOLCE-203ENST00000462260 BIVM-ERCC5R4GMW8 1640 aa24.25■■□□□ 1.47
PCOLCE-203ENST00000462260 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
PCOLCE-203ENST00000462260 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
PCOLCE-203ENST00000462260 RIMBP3CA6NJZ7 1639 aa24.24■■□□□ 1.47
PCOLCE-203ENST00000462260 RIMBP3BA6NNM3 1639 aa24.24■■□□□ 1.47
PCOLCE-203ENST00000462260 RIMBP3Q9UFD9 1639 aa24.24■■□□□ 1.47
PCOLCE-203ENST00000462260 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
PCOLCE-203ENST00000462260 ARHGEF11O15085 1522 aa24.21■■□□□ 1.47
PCOLCE-203ENST00000462260 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
PCOLCE-203ENST00000462260 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
PCOLCE-203ENST00000462260 SYNJ2O15056 1496 aa24.16■■□□□ 1.46
PCOLCE-203ENST00000462260 CHMP7Q8WUX9 453 aaPredicted RBP24.16■■□□□ 1.46
PCOLCE-203ENST00000462260 CLASP1Q7Z460 1538 aa24.09■■□□□ 1.45
PCOLCE-203ENST00000462260 ARAP1Q96P48 1450 aa24■■□□□ 1.43
PCOLCE-203ENST00000462260 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
PCOLCE-203ENST00000462260 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
PCOLCE-203ENST00000462260 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
PCOLCE-203ENST00000462260 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
PCOLCE-203ENST00000462260 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
PCOLCE-203ENST00000462260 NUP160Q12769 1436 aa23.9■■□□□ 1.42
PCOLCE-203ENST00000462260 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
PCOLCE-203ENST00000462260 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
PCOLCE-203ENST00000462260 IGF1RP08069 1367 aa23.76■■□□□ 1.39
PCOLCE-203ENST00000462260 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
PCOLCE-203ENST00000462260 ERCC6L2Q5T890 1561 aa23.73■■□□□ 1.39
PCOLCE-203ENST00000462260 CUL7Q14999 1698 aa23.68■■□□□ 1.38
PCOLCE-203ENST00000462260 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
PCOLCE-203ENST00000462260 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms