RNA–Protein interactions for RNA: ENST00000462228.1

TPRA1-205, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 5

Gene TPRA1, Length 713 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-205ENST00000462228 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
TPRA1-205ENST00000462228 ABCC9O60706 1549 aa30.08■■■□□ 2.41
TPRA1-205ENST00000462228 CCDC180Q9P1Z9 1646 aa30.01■■■□□ 2.39
TPRA1-205ENST00000462228 RB1CC1Q8TDY2 1594 aa28.61■■■□□ 2.17
TPRA1-205ENST00000462228 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
TPRA1-205ENST00000462228 NACADO15069 1562 aa28.43■■■□□ 2.14
TPRA1-205ENST00000462228 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
TPRA1-205ENST00000462228 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
TPRA1-205ENST00000462228 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
TPRA1-205ENST00000462228 MYO15BQ96JP2 1530 aa28.03■■■□□ 2.08
TPRA1-205ENST00000462228 UNC13AQ9UPW8 1703 aa27.85■■■□□ 2.05
TPRA1-205ENST00000462228 DCAF1Q9Y4B6 1507 aa27.83■■■□□ 2.05
TPRA1-205ENST00000462228 BICRAQ9NZM4 1560 aa27.74■■■□□ 2.03
TPRA1-205ENST00000462228 SCRIBQ14160 1630 aa27.4■■□□□ 1.98
TPRA1-205ENST00000462228 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
TPRA1-205ENST00000462228 CC2D2AQ9P2K1 1620 aa27.12■■□□□ 1.93
TPRA1-205ENST00000462228 CECR2Q9BXF3 1484 aa27.09■■□□□ 1.93
TPRA1-205ENST00000462228 EIF4G1Q04637 1599 aaKnown RBP27.08■■□□□ 1.93
TPRA1-205ENST00000462228 NCAPD3P42695 1498 aa26.28■■□□□ 1.8
TPRA1-205ENST00000462228 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
TPRA1-205ENST00000462228 SMARCA4P51532 1647 aa26.13■■□□□ 1.77
TPRA1-205ENST00000462228 SMARCA2P51531 1590 aa26.11■■□□□ 1.77
TPRA1-205ENST00000462228 BAZ1AQ9NRL2 1556 aaPredicted RBP26.04■■□□□ 1.76
TPRA1-205ENST00000462228 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
TPRA1-205ENST00000462228 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
TPRA1-205ENST00000462228 ERCC6Q03468 1493 aa25.98■■□□□ 1.75
TPRA1-205ENST00000462228 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
TPRA1-205ENST00000462228 CUX2O14529 1486 aa25.88■■□□□ 1.73
TPRA1-205ENST00000462228 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
TPRA1-205ENST00000462228 PEG3Q9GZU2 1588 aa25.86■■□□□ 1.73
TPRA1-205ENST00000462228 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
TPRA1-205ENST00000462228 NESP48681 1621 aa25.83■■□□□ 1.73
TPRA1-205ENST00000462228 WIZO95785 1651 aa25.76■■□□□ 1.71
TPRA1-205ENST00000462228 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.69
TPRA1-205ENST00000462228 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
TPRA1-205ENST00000462228 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
TPRA1-205ENST00000462228 CADPSQ9ULU8 1353 aa25.51■■□□□ 1.67
TPRA1-205ENST00000462228 THOC2Q8NI27 1593 aaKnown RBP25.49■■□□□ 1.67
TPRA1-205ENST00000462228 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
TPRA1-205ENST00000462228 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
TPRA1-205ENST00000462228 MRC2Q9UBG0 1479 aa25.29■■□□□ 1.64
TPRA1-205ENST00000462228 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
TPRA1-205ENST00000462228 WDR62O43379 1518 aa25.19■■□□□ 1.62
TPRA1-205ENST00000462228 CFTRP13569 1480 aa25.19■■□□□ 1.62
TPRA1-205ENST00000462228 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
TPRA1-205ENST00000462228 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
TPRA1-205ENST00000462228 URB2Q14146 1524 aaKnown RBP24.95■■□□□ 1.58
TPRA1-205ENST00000462228 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
TPRA1-205ENST00000462228 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
TPRA1-205ENST00000462228 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
TPRA1-205ENST00000462228 IFT140Q96RY7 1462 aa24.7■■□□□ 1.55
TPRA1-205ENST00000462228 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
TPRA1-205ENST00000462228 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
TPRA1-205ENST00000462228 ZNF608Q9ULD9 1512 aaPredicted RBP24.65■■□□□ 1.54
TPRA1-205ENST00000462228 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
TPRA1-205ENST00000462228 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.51
TPRA1-205ENST00000462228 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
TPRA1-205ENST00000462228 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.51
TPRA1-205ENST00000462228 TARBP1Q13395 1621 aaKnown RBP24.43■■□□□ 1.5
TPRA1-205ENST00000462228 SOGA1O94964 1423 aa24.41■■□□□ 1.5
TPRA1-205ENST00000462228 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
TPRA1-205ENST00000462228 FBLN2P98095 1184 aa24.38■■□□□ 1.49
TPRA1-205ENST00000462228 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
TPRA1-205ENST00000462228 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
TPRA1-205ENST00000462228 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
TPRA1-205ENST00000462228 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
TPRA1-205ENST00000462228 CUX1P39880 1505 aa24.35■■□□□ 1.49
TPRA1-205ENST00000462228 WRNQ14191 1432 aaPredicted RBP eCLIP24.35■■□□□ 1.49
TPRA1-205ENST00000462228 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
TPRA1-205ENST00000462228 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
TPRA1-205ENST00000462228 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
TPRA1-205ENST00000462228 CHD1O14646 1710 aa24.25■■□□□ 1.47
TPRA1-205ENST00000462228 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
TPRA1-205ENST00000462228 BIVM-ERCC5R4GMW8 1640 aa24.24■■□□□ 1.47
TPRA1-205ENST00000462228 CYB5RLQ6IPT4 315 aa24.23■■□□□ 1.47
TPRA1-205ENST00000462228 CHMP7Q8WUX9 453 aaPredicted RBP24.2■■□□□ 1.46
TPRA1-205ENST00000462228 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
TPRA1-205ENST00000462228 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
TPRA1-205ENST00000462228 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
TPRA1-205ENST00000462228 GRIN2BQ13224 1484 aa24.15■■□□□ 1.46
TPRA1-205ENST00000462228 MAGI1Q96QZ7 1491 aaPredicted RBP24.13■■□□□ 1.45
TPRA1-205ENST00000462228 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
TPRA1-205ENST00000462228 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
TPRA1-205ENST00000462228 SYNJ2O15056 1496 aa24.06■■□□□ 1.44
TPRA1-205ENST00000462228 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
TPRA1-205ENST00000462228 CLASP1Q7Z460 1538 aa24.01■■□□□ 1.43
TPRA1-205ENST00000462228 TRHP20396 242 aaPredicted RBP23.97■■□□□ 1.43
TPRA1-205ENST00000462228 PBRM1Q86U86 1689 aa23.96■■□□□ 1.43
TPRA1-205ENST00000462228 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
TPRA1-205ENST00000462228 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
TPRA1-205ENST00000462228 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
TPRA1-205ENST00000462228 KIF27Q86VH2 1401 aa23.78■■□□□ 1.4
TPRA1-205ENST00000462228 FHAD1B1AJZ9 1412 aa23.77■■□□□ 1.4
TPRA1-205ENST00000462228 ADAMTS12P58397 1594 aa23.77■■□□□ 1.4
TPRA1-205ENST00000462228 NUP160Q12769 1436 aa23.74■■□□□ 1.39
TPRA1-205ENST00000462228 ERICH3Q5RHP9 1530 aa23.72■■□□□ 1.39
TPRA1-205ENST00000462228 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
TPRA1-205ENST00000462228 FAM9AQ8IZU1 332 aaPredicted RBP23.68■■□□□ 1.38
TPRA1-205ENST00000462228 IGF1RP08069 1367 aa23.65■■□□□ 1.38
TPRA1-205ENST00000462228 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms