RNA–Protein interactions for RNA: ENST00000462223.1

GKAP1-205, Transcript of G kinase anchoring protein 1, humanhuman

TSL 5

Gene GKAP1, Length 269 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKAP1-205ENST00000462223 NISCHQ9Y2I1 1504 aa27.72■■■□□ 2.03
GKAP1-205ENST00000462223 CCDC180Q9P1Z9 1646 aa25■■□□□ 1.59
GKAP1-205ENST00000462223 ABCC9O60706 1549 aa24.9■■□□□ 1.58
GKAP1-205ENST00000462223 RB1CC1Q8TDY2 1594 aa23.75■■□□□ 1.39
GKAP1-205ENST00000462223 NACADO15069 1562 aa23.57■■□□□ 1.36
GKAP1-205ENST00000462223 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
GKAP1-205ENST00000462223 UNC13AQ9UPW8 1703 aa23.31■■□□□ 1.32
GKAP1-205ENST00000462223 DNAJC5BQ9UF47 199 aa23.23■■□□□ 1.31
GKAP1-205ENST00000462223 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
GKAP1-205ENST00000462223 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
GKAP1-205ENST00000462223 BICRAQ9NZM4 1560 aa23.01■■□□□ 1.27
GKAP1-205ENST00000462223 ZCCHC6Q5VYS8 1495 aaKnown RBP22.98■■□□□ 1.27
GKAP1-205ENST00000462223 DCAF1Q9Y4B6 1507 aa22.91■■□□□ 1.26
GKAP1-205ENST00000462223 SCRIBQ14160 1630 aa22.75■■□□□ 1.23
GKAP1-205ENST00000462223 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
GKAP1-205ENST00000462223 CC2D2AQ9P2K1 1620 aa22.53■■□□□ 1.2
GKAP1-205ENST00000462223 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
GKAP1-205ENST00000462223 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
GKAP1-205ENST00000462223 SMARCA4P51532 1647 aa21.69■■□□□ 1.06
GKAP1-205ENST00000462223 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
GKAP1-205ENST00000462223 ATAD2BQ9ULI0 1458 aa21.64■■□□□ 1.05
GKAP1-205ENST00000462223 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
GKAP1-205ENST00000462223 HMGXB3Q12766 1538 aa21.6■■□□□ 1.05
GKAP1-205ENST00000462223 BAZ1AQ9NRL2 1556 aaPredicted RBP21.56■■□□□ 1.04
GKAP1-205ENST00000462223 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
GKAP1-205ENST00000462223 CUX2O14529 1486 aa21.48■■□□□ 1.03
GKAP1-205ENST00000462223 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
GKAP1-205ENST00000462223 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
GKAP1-205ENST00000462223 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
GKAP1-205ENST00000462223 NESP48681 1621 aa21.37■■□□□ 1.01
GKAP1-205ENST00000462223 MROH2BQ7Z745 1585 aa21.35■■□□□ 1.01
GKAP1-205ENST00000462223 LAMC3Q9Y6N6 1575 aa21.28■■□□□ 1
GKAP1-205ENST00000462223 THOC2Q8NI27 1593 aaKnown RBP21.23■□□□□ 0.99
GKAP1-205ENST00000462223 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
GKAP1-205ENST00000462223 WIZO95785 1651 aa21.16■□□□□ 0.98
GKAP1-205ENST00000462223 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
GKAP1-205ENST00000462223 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
GKAP1-205ENST00000462223 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
GKAP1-205ENST00000462223 WDR62O43379 1518 aa20.9■□□□□ 0.94
GKAP1-205ENST00000462223 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
GKAP1-205ENST00000462223 CEP164Q9UPV0 1460 aa20.88■□□□□ 0.93
GKAP1-205ENST00000462223 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
GKAP1-205ENST00000462223 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
GKAP1-205ENST00000462223 PRDM2Q13029 1718 aa20.81■□□□□ 0.92
GKAP1-205ENST00000462223 CFTRP13569 1480 aa20.79■□□□□ 0.92
GKAP1-205ENST00000462223 URB2Q14146 1524 aaKnown RBP20.64■□□□□ 0.9
GKAP1-205ENST00000462223 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
GKAP1-205ENST00000462223 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
GKAP1-205ENST00000462223 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
GKAP1-205ENST00000462223 TOPBP1Q92547 1522 aa20.43■□□□□ 0.86
GKAP1-205ENST00000462223 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
GKAP1-205ENST00000462223 ABCC8Q09428 1581 aa20.4■□□□□ 0.86
GKAP1-205ENST00000462223 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
GKAP1-205ENST00000462223 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
GKAP1-205ENST00000462223 EIF4G3O43432 1585 aaKnown RBP20.36■□□□□ 0.85
GKAP1-205ENST00000462223 TARBP1Q13395 1621 aaKnown RBP20.28■□□□□ 0.84
GKAP1-205ENST00000462223 RIMBP3CA6NJZ7 1639 aa20.27■□□□□ 0.84
GKAP1-205ENST00000462223 RIMBP3BA6NNM3 1639 aa20.27■□□□□ 0.84
GKAP1-205ENST00000462223 RIMBP3Q9UFD9 1639 aa20.27■□□□□ 0.84
GKAP1-205ENST00000462223 CHD1O14646 1710 aa20.26■□□□□ 0.83
GKAP1-205ENST00000462223 POLA1P09884 1462 aaPredicted RBP20.22■□□□□ 0.83
GKAP1-205ENST00000462223 AQRO60306 1485 aaKnown RBP eCLIP20.18■□□□□ 0.82
GKAP1-205ENST00000462223 ARHGEF11O15085 1522 aa20.17■□□□□ 0.82
GKAP1-205ENST00000462223 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
GKAP1-205ENST00000462223 WDR97A6NE52 1622 aa20.12■□□□□ 0.81
GKAP1-205ENST00000462223 SOGA1O94964 1423 aa20.1■□□□□ 0.81
GKAP1-205ENST00000462223 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
GKAP1-205ENST00000462223 CUX1P39880 1505 aa20.08■□□□□ 0.81
GKAP1-205ENST00000462223 FBLN2P98095 1184 aa20.07■□□□□ 0.8
GKAP1-205ENST00000462223 TDRD9Q8NDG6 1382 aaKnown RBP20.04■□□□□ 0.8
GKAP1-205ENST00000462223 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
GKAP1-205ENST00000462223 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
GKAP1-205ENST00000462223 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
GKAP1-205ENST00000462223 SYNJ1O43426 1573 aa19.96■□□□□ 0.79
GKAP1-205ENST00000462223 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
GKAP1-205ENST00000462223 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
GKAP1-205ENST00000462223 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
GKAP1-205ENST00000462223 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
GKAP1-205ENST00000462223 CLASP1Q7Z460 1538 aa19.93■□□□□ 0.78
GKAP1-205ENST00000462223 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
GKAP1-205ENST00000462223 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
GKAP1-205ENST00000462223 GAPVD1Q14C86 1478 aa19.89■□□□□ 0.77
GKAP1-205ENST00000462223 ABCA5Q8WWZ7 1642 aa19.89■□□□□ 0.77
GKAP1-205ENST00000462223 ABCA10Q8WWZ4 1543 aa19.86■□□□□ 0.77
GKAP1-205ENST00000462223 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
GKAP1-205ENST00000462223 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
GKAP1-205ENST00000462223 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
GKAP1-205ENST00000462223 TRHP20396 242 aaPredicted RBP19.77■□□□□ 0.76
GKAP1-205ENST00000462223 ADAMTS12P58397 1594 aa19.74■□□□□ 0.75
GKAP1-205ENST00000462223 GRIN2AQ12879 1464 aa19.71■□□□□ 0.75
GKAP1-205ENST00000462223 CEP170Q5SW79 1584 aa19.66■□□□□ 0.74
GKAP1-205ENST00000462223 ERICH3Q5RHP9 1530 aa19.64■□□□□ 0.73
GKAP1-205ENST00000462223 FHAD1B1AJZ9 1412 aa19.62■□□□□ 0.73
GKAP1-205ENST00000462223 NUP160Q12769 1436 aa19.61■□□□□ 0.73
GKAP1-205ENST00000462223 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
GKAP1-205ENST00000462223 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
GKAP1-205ENST00000462223 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
GKAP1-205ENST00000462223 CUL7Q14999 1698 aa19.43■□□□□ 0.7
GKAP1-205ENST00000462223 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
GKAP1-205ENST00000462223 KIF13AQ9H1H9 1805 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms