RNA–Protein interactions for RNA: ENST00000462151.5

SCAMP3-203, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-203ENST00000462151 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
SCAMP3-203ENST00000462151 CCDC180Q9P1Z9 1646 aa26.59■■□□□ 1.85
SCAMP3-203ENST00000462151 ABCC9O60706 1549 aa26.47■■□□□ 1.83
SCAMP3-203ENST00000462151 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
SCAMP3-203ENST00000462151 NACADO15069 1562 aa25.13■■□□□ 1.61
SCAMP3-203ENST00000462151 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
SCAMP3-203ENST00000462151 MYO15BQ96JP2 1530 aa24.82■■□□□ 1.56
SCAMP3-203ENST00000462151 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
SCAMP3-203ENST00000462151 PABPN1Q86U42 306 aaKnown RBP eCLIP24.66■■□□□ 1.54
SCAMP3-203ENST00000462151 UNC13AQ9UPW8 1703 aa24.64■■□□□ 1.54
SCAMP3-203ENST00000462151 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
SCAMP3-203ENST00000462151 DCAF1Q9Y4B6 1507 aa24.53■■□□□ 1.52
SCAMP3-203ENST00000462151 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
SCAMP3-203ENST00000462151 SHROOM4Q9ULL8 1493 aa24.25■■□□□ 1.47
SCAMP3-203ENST00000462151 SCRIBQ14160 1630 aa24.21■■□□□ 1.47
SCAMP3-203ENST00000462151 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
SCAMP3-203ENST00000462151 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
SCAMP3-203ENST00000462151 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
SCAMP3-203ENST00000462151 NCAPD3P42695 1498 aa23.18■■□□□ 1.3
SCAMP3-203ENST00000462151 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
SCAMP3-203ENST00000462151 SMARCA4P51532 1647 aa23.12■■□□□ 1.29
SCAMP3-203ENST00000462151 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
SCAMP3-203ENST00000462151 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
SCAMP3-203ENST00000462151 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
SCAMP3-203ENST00000462151 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-203ENST00000462151 PEG3Q9GZU2 1588 aa22.9■■□□□ 1.26
SCAMP3-203ENST00000462151 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
SCAMP3-203ENST00000462151 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
SCAMP3-203ENST00000462151 CUX2O14529 1486 aa22.81■■□□□ 1.24
SCAMP3-203ENST00000462151 NESP48681 1621 aa22.76■■□□□ 1.23
SCAMP3-203ENST00000462151 DNAJC5Q9H3Z4 198 aa22.67■■□□□ 1.22
SCAMP3-203ENST00000462151 LAMC3Q9Y6N6 1575 aa22.65■■□□□ 1.22
SCAMP3-203ENST00000462151 WIZO95785 1651 aa22.56■■□□□ 1.2
SCAMP3-203ENST00000462151 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
SCAMP3-203ENST00000462151 THOC2Q8NI27 1593 aaKnown RBP22.52■■□□□ 1.2
SCAMP3-203ENST00000462151 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
SCAMP3-203ENST00000462151 KIF21AQ7Z4S6 1674 aa22.47■■□□□ 1.19
SCAMP3-203ENST00000462151 RSF1Q96T23 1441 aaPredicted RBP22.42■■□□□ 1.18
SCAMP3-203ENST00000462151 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
SCAMP3-203ENST00000462151 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
SCAMP3-203ENST00000462151 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
SCAMP3-203ENST00000462151 WDR62O43379 1518 aa22.26■■□□□ 1.15
SCAMP3-203ENST00000462151 CFTRP13569 1480 aa22.25■■□□□ 1.15
SCAMP3-203ENST00000462151 FANCD2Q9BXW9 1451 aa22.23■■□□□ 1.15
SCAMP3-203ENST00000462151 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
SCAMP3-203ENST00000462151 URB2Q14146 1524 aaKnown RBP22.02■■□□□ 1.12
SCAMP3-203ENST00000462151 PRDM2Q13029 1718 aa22.02■■□□□ 1.12
SCAMP3-203ENST00000462151 TOPBP1Q92547 1522 aa21.81■■□□□ 1.08
SCAMP3-203ENST00000462151 IFT140Q96RY7 1462 aa21.81■■□□□ 1.08
SCAMP3-203ENST00000462151 ABCC8Q09428 1581 aa21.81■■□□□ 1.08
SCAMP3-203ENST00000462151 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
SCAMP3-203ENST00000462151 DNMBPQ6XZF7 1577 aa21.75■■□□□ 1.07
SCAMP3-203ENST00000462151 ZNF608Q9ULD9 1512 aaPredicted RBP21.73■■□□□ 1.07
SCAMP3-203ENST00000462151 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
SCAMP3-203ENST00000462151 EIF4G3O43432 1585 aaKnown RBP21.62■■□□□ 1.05
SCAMP3-203ENST00000462151 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
SCAMP3-203ENST00000462151 POLA1P09884 1462 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-203ENST00000462151 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
SCAMP3-203ENST00000462151 SOGA1O94964 1423 aa21.5■■□□□ 1.03
SCAMP3-203ENST00000462151 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
SCAMP3-203ENST00000462151 SUPT5HO00267 1087 aaKnown RBP21.49■■□□□ 1.03
SCAMP3-203ENST00000462151 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
SCAMP3-203ENST00000462151 CUX1P39880 1505 aa21.46■■□□□ 1.03
SCAMP3-203ENST00000462151 RIMBP3CA6NJZ7 1639 aa21.46■■□□□ 1.03
SCAMP3-203ENST00000462151 RIMBP3BA6NNM3 1639 aa21.46■■□□□ 1.03
SCAMP3-203ENST00000462151 RIMBP3Q9UFD9 1639 aa21.46■■□□□ 1.03
SCAMP3-203ENST00000462151 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
SCAMP3-203ENST00000462151 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
SCAMP3-203ENST00000462151 CHD1O14646 1710 aa21.43■■□□□ 1.02
SCAMP3-203ENST00000462151 ARHGEF11O15085 1522 aa21.41■■□□□ 1.02
SCAMP3-203ENST00000462151 FBLN2P98095 1184 aa21.41■■□□□ 1.02
SCAMP3-203ENST00000462151 SNAPC4Q5SXM2 1469 aa21.35■■□□□ 1.01
SCAMP3-203ENST00000462151 GRIN2BQ13224 1484 aa21.32■■□□□ 1
SCAMP3-203ENST00000462151 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
SCAMP3-203ENST00000462151 CHMP7Q8WUX9 453 aaPredicted RBP21.28■■□□□ 1
SCAMP3-203ENST00000462151 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
SCAMP3-203ENST00000462151 CYB5RLQ6IPT4 315 aa21.25■□□□□ 0.99
SCAMP3-203ENST00000462151 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
SCAMP3-203ENST00000462151 SYNJ2O15056 1496 aa21.24■□□□□ 0.99
SCAMP3-203ENST00000462151 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
SCAMP3-203ENST00000462151 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
SCAMP3-203ENST00000462151 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
SCAMP3-203ENST00000462151 CLASP1Q7Z460 1538 aa21.2■□□□□ 0.98
SCAMP3-203ENST00000462151 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
SCAMP3-203ENST00000462151 WRNQ14191 1432 aaPredicted RBP eCLIP21.19■□□□□ 0.98
SCAMP3-203ENST00000462151 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
SCAMP3-203ENST00000462151 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
SCAMP3-203ENST00000462151 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
SCAMP3-203ENST00000462151 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
SCAMP3-203ENST00000462151 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
SCAMP3-203ENST00000462151 ERICH3Q5RHP9 1530 aa20.99■□□□□ 0.95
SCAMP3-203ENST00000462151 TRHP20396 242 aaPredicted RBP20.99■□□□□ 0.95
SCAMP3-203ENST00000462151 NUP160Q12769 1436 aa20.96■□□□□ 0.95
SCAMP3-203ENST00000462151 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
SCAMP3-203ENST00000462151 ERCC6L2Q5T890 1561 aa20.85■□□□□ 0.93
SCAMP3-203ENST00000462151 SHROOM2Q13796 1616 aa20.85■□□□□ 0.93
SCAMP3-203ENST00000462151 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
SCAMP3-203ENST00000462151 JPH4Q96JJ6 628 aa20.75■□□□□ 0.91
SCAMP3-203ENST00000462151 PRG4Q92954 1404 aaPredicted RBP20.75■□□□□ 0.91
SCAMP3-203ENST00000462151 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms