RNA–Protein interactions for RNA: ENST00000462135.1

STX1A-206, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-206ENST00000462135 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
STX1A-206ENST00000462135 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
STX1A-206ENST00000462135 ZCCHC6Q5VYS8 1495 aaKnown RBP23.36■■□□□ 1.33
STX1A-206ENST00000462135 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
STX1A-206ENST00000462135 ABCC9O60706 1549 aa23.11■■□□□ 1.29
STX1A-206ENST00000462135 MYO15BQ96JP2 1530 aa23.02■■□□□ 1.28
STX1A-206ENST00000462135 NACADO15069 1562 aa22.84■■□□□ 1.25
STX1A-206ENST00000462135 DCAF8L2P0C7V8 631 aa22.79■■□□□ 1.24
STX1A-206ENST00000462135 RB1CC1Q8TDY2 1594 aa22.65■■□□□ 1.22
STX1A-206ENST00000462135 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
STX1A-206ENST00000462135 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
STX1A-206ENST00000462135 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
STX1A-206ENST00000462135 BICRAQ9NZM4 1560 aa21.9■■□□□ 1.1
STX1A-206ENST00000462135 PABPN1Q86U42 306 aaKnown RBP eCLIP21.67■■□□□ 1.06
STX1A-206ENST00000462135 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
STX1A-206ENST00000462135 CECR2Q9BXF3 1484 aa21.53■■□□□ 1.04
STX1A-206ENST00000462135 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
STX1A-206ENST00000462135 SMARCA4P51532 1647 aa21.42■■□□□ 1.02
STX1A-206ENST00000462135 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
STX1A-206ENST00000462135 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
STX1A-206ENST00000462135 PEG3Q9GZU2 1588 aa21.27■■□□□ 1
STX1A-206ENST00000462135 EIF4G1Q04637 1599 aaKnown RBP21.27■□□□□ 0.99
STX1A-206ENST00000462135 SMARCA2P51531 1590 aa21.19■□□□□ 0.98
STX1A-206ENST00000462135 WIZO95785 1651 aa21.17■□□□□ 0.98
STX1A-206ENST00000462135 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.98
STX1A-206ENST00000462135 TOP2AP11388 1531 aaKnown RBP21.09■□□□□ 0.97
STX1A-206ENST00000462135 NCAPD3P42695 1498 aa21.07■□□□□ 0.96
STX1A-206ENST00000462135 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
STX1A-206ENST00000462135 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
STX1A-206ENST00000462135 CC2D2AQ9P2K1 1620 aa20.96■□□□□ 0.95
STX1A-206ENST00000462135 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
STX1A-206ENST00000462135 DNAJC5BQ9UF47 199 aa20.51■□□□□ 0.87
STX1A-206ENST00000462135 CFTRP13569 1480 aa20.5■□□□□ 0.87
STX1A-206ENST00000462135 CADPSQ9ULU8 1353 aa20.46■□□□□ 0.87
STX1A-206ENST00000462135 CHIC1Q5VXU3 224 aa20.42■□□□□ 0.86
STX1A-206ENST00000462135 LAMC3Q9Y6N6 1575 aa20.37■□□□□ 0.85
STX1A-206ENST00000462135 PRDM2Q13029 1718 aa20.35■□□□□ 0.85
STX1A-206ENST00000462135 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
STX1A-206ENST00000462135 PDS5BQ9NTI5 1447 aa20.21■□□□□ 0.83
STX1A-206ENST00000462135 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
STX1A-206ENST00000462135 NESP48681 1621 aa20.2■□□□□ 0.82
STX1A-206ENST00000462135 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
STX1A-206ENST00000462135 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
STX1A-206ENST00000462135 CEP164Q9UPV0 1460 aa20.11■□□□□ 0.81
STX1A-206ENST00000462135 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
STX1A-206ENST00000462135 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
STX1A-206ENST00000462135 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
STX1A-206ENST00000462135 CUX1P39880 1505 aa20.06■□□□□ 0.8
STX1A-206ENST00000462135 DNMBPQ6XZF7 1577 aa20.01■□□□□ 0.79
STX1A-206ENST00000462135 KIF21AQ7Z4S6 1674 aa19.97■□□□□ 0.79
STX1A-206ENST00000462135 TOPBP1Q92547 1522 aa19.96■□□□□ 0.79
STX1A-206ENST00000462135 EEA1Q15075 1411 aa19.94■□□□□ 0.78
STX1A-206ENST00000462135 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
STX1A-206ENST00000462135 URB2Q14146 1524 aaKnown RBP19.93■□□□□ 0.78
STX1A-206ENST00000462135 ERCC6Q03468 1493 aa19.9■□□□□ 0.78
STX1A-206ENST00000462135 FGD5Q6ZNL6 1462 aa19.87■□□□□ 0.77
STX1A-206ENST00000462135 WDR62O43379 1518 aa19.86■□□□□ 0.77
STX1A-206ENST00000462135 POLA1P09884 1462 aaPredicted RBP19.84■□□□□ 0.77
STX1A-206ENST00000462135 THOC2Q8NI27 1593 aaKnown RBP19.8■□□□□ 0.76
STX1A-206ENST00000462135 SOGA1O94964 1423 aa19.8■□□□□ 0.76
STX1A-206ENST00000462135 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
STX1A-206ENST00000462135 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
STX1A-206ENST00000462135 CSRNP3Q8WYN3 585 aa19.7■□□□□ 0.74
STX1A-206ENST00000462135 CUX2O14529 1486 aa19.7■□□□□ 0.74
STX1A-206ENST00000462135 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
STX1A-206ENST00000462135 RUSC2Q8N2Y8 1516 aa19.69■□□□□ 0.74
STX1A-206ENST00000462135 WDR97A6NE52 1622 aa19.69■□□□□ 0.74
STX1A-206ENST00000462135 TARBP1Q13395 1621 aaKnown RBP19.68■□□□□ 0.74
STX1A-206ENST00000462135 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
STX1A-206ENST00000462135 FAM9AQ8IZU1 332 aaPredicted RBP19.65■□□□□ 0.74
STX1A-206ENST00000462135 KIF21BO75037 1637 aa19.61■□□□□ 0.73
STX1A-206ENST00000462135 ABCA5Q8WWZ7 1642 aa19.61■□□□□ 0.73
STX1A-206ENST00000462135 PRXQ9BXM0 1461 aa19.58■□□□□ 0.72
STX1A-206ENST00000462135 IGF1RP08069 1367 aa19.57■□□□□ 0.72
STX1A-206ENST00000462135 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
STX1A-206ENST00000462135 GOLGA3Q08378 1498 aa19.55■□□□□ 0.72
STX1A-206ENST00000462135 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
STX1A-206ENST00000462135 TDRD9Q8NDG6 1382 aaKnown RBP19.51■□□□□ 0.71
STX1A-206ENST00000462135 CUL7Q14999 1698 aa19.5■□□□□ 0.71
STX1A-206ENST00000462135 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
STX1A-206ENST00000462135 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
STX1A-206ENST00000462135 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
STX1A-206ENST00000462135 TNIKQ9UKE5 1360 aa19.45■□□□□ 0.7
STX1A-206ENST00000462135 RAPGEF2Q9Y4G8 1499 aa19.45■□□□□ 0.7
STX1A-206ENST00000462135 ZNF608Q9ULD9 1512 aaPredicted RBP19.45■□□□□ 0.7
STX1A-206ENST00000462135 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.72e-6■■■■■ 26.9
STX1A-206ENST00000462135 EIF4G3O43432 1585 aaKnown RBP19.43■□□□□ 0.7
STX1A-206ENST00000462135 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
STX1A-206ENST00000462135 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
STX1A-206ENST00000462135 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
STX1A-206ENST00000462135 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
STX1A-206ENST00000462135 UBTFP17480 764 aaKnown RBP19.34■□□□□ 0.69
STX1A-206ENST00000462135 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
STX1A-206ENST00000462135 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
STX1A-206ENST00000462135 SYNJ2O15056 1496 aa19.27■□□□□ 0.67
STX1A-206ENST00000462135 EHMT2Q96KQ7 1210 aa19.24■□□□□ 0.67
STX1A-206ENST00000462135 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
STX1A-206ENST00000462135 CLIP1P30622 1438 aa19.19■□□□□ 0.66
STX1A-206ENST00000462135 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
STX1A-206ENST00000462135 CHMP7Q8WUX9 453 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms